AT5G23570 : SUPPRESSOR OF GENE SILENCING 3
Query Information
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AGICode AT5G23570
Description XS domain-containing protein / XS zinc finger domain-containing protein-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 1 0.29 -0.32
2 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.77 0.32 -0.3
3 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 -0.75 0.32 -0.33
4 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.75 0.32 -0.31
5 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 -0.74 0.3 -0.32
6 AT5G23230 nicotinamidase 2 nicotinamidase 2 -0.74 0.33 -0.29
7 AT5G28050 Cytidine/deoxycytidylate deaminase family protein -0.73 0.31 -0.32
8 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.32 -0.33
9 AT1G61790 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.7 0.32 -0.34
10 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 -0.7 0.33 -0.33
11 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.29 -0.33
12 AT4G01850 S-adenosylmethionine synthetase 2 AtSAM2, MAT2, S-adenosylmethionine
synthetase 2, S-ADENOSYLMETHIONINE
SYNTHETASE 2		 -0.7 0.29 -0.31
13 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 -0.69 0.33 -0.32
14 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 -0.69 0.32 -0.31
15 AT5G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.32 -0.32
16 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 -0.68 0.29 -0.33
17 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 -0.68 0.32 -0.31
18 AT1G69720 heme oxygenase 3 heme oxygenase 3 0.68 0.32 -0.29
19 AT5G05750 DNAJ heat shock N-terminal domain-containing protein -0.68 0.34 -0.3
20 AT4G31340 myosin heavy chain-related -0.67 0.32 -0.31
21 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 -0.66 0.33 -0.32
22 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.32 -0.31
23 AT1G44790 ChaC-like family protein -0.66 0.3 -0.33
24 AT4G12060 Double Clp-N motif protein -0.65 0.32 -0.32
25 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.32 -0.35
26 AT1G62850 Class I peptide chain release factor -0.65 0.31 -0.31
27 AT4G22930 pyrimidin 4 DIHYDROOROTASE, pyrimidin 4 -0.65 0.34 -0.32
28 AT1G66540 Cytochrome P450 superfamily protein -0.65 0.32 -0.33
29 AT1G47260 gamma carbonic anhydrase 2 APFI, gamma carbonic anhydrase 2 -0.64 0.32 -0.32
30 AT4G08280 Thioredoxin superfamily protein -0.64 0.3 -0.32
31 AT1G63110 GPI transamidase subunit PIG-U -0.64 0.32 -0.31
32 AT4G25710 Galactose oxidase/kelch repeat superfamily protein -0.64 0.31 -0.29
33 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 -0.64 0.33 -0.31
34 AT5G42390 Insulinase (Peptidase family M16) family protein stromal processing peptidase -0.64 0.33 -0.32
35 AT5G36890 beta glucosidase 42 beta glucosidase 42 -0.63 0.32 -0.31
36 AT5G28030 L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 0.63 0.32 -0.31
37 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit -0.63 0.32 -0.32
38 AT5G41650 Lactoylglutathione lyase / glyoxalase I family protein -0.62 0.33 -0.31
39 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 -0.62 0.3 -0.3
40 AT5G61240 Leucine-rich repeat (LRR) family protein -0.62 0.33 -0.3
41 AT5G03345 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Magnesium transporter (InterPro:IPR018937); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.61 0.31 -0.33
42 AT1G66100 Plant thionin -0.61 0.33 -0.34
43 AT1G13900 Purple acid phosphatases superfamily protein -0.61 0.32 -0.32
44 AT1G47420 succinate dehydrogenase 5 succinate dehydrogenase 5 -0.61 0.33 -0.32
45 AT5G63850 amino acid permease 4 amino acid permease 4 -0.61 0.31 -0.34
46 AT5G36290 Uncharacterized protein family (UPF0016) -0.61 0.32 -0.31
47 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 -0.6 0.3 -0.29
48 AT1G68930 pentatricopeptide (PPR) repeat-containing protein -0.6 0.3 -0.31
49 AT5G36230 ARM repeat superfamily protein -0.6 0.32 -0.31
50 AT4G17080 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 0.6 0.31 -0.3
51 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein -0.6 0.33 -0.31
52 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 -0.6 0.3 -0.32
53 AT4G31590 Cellulose-synthase-like C5 CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5,
CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5		 -0.6 0.33 -0.32
54 AT1G05500 Calcium-dependent lipid-binding (CaLB domain) family
protein		 ARABIDOPSIS THALIANA SYNAPTOTAGMIN
HOMOLOG E, NTMC2T2.1,
NTMC2TYPE2.1, synaptotagmin 5,
SYNAPTOTAGMIN HOMOLOG E		 -0.6 0.32 -0.32
55 AT1G52760 lysophospholipase 2 lysophospholipase 2 -0.6 0.32 -0.3
56 AT5G54090 DNA mismatch repair protein MutS, type 2 0.6 0.31 -0.34
57 AT2G23560 methyl esterase 7 ARABIDOPSIS THALIANA METHYL
ESTERASE 7, methyl esterase 7		 -0.6 0.32 -0.32
58 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein -0.6 0.32 -0.33
59 AT5G26940 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 defective in pollen organelle DNA
degradation1		 -0.6 0.31 -0.3
60 AT4G28040 nodulin MtN21 /EamA-like transporter family protein 0.6 0.32 -0.31
61 AT1G11710 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.33 -0.33
62 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 0.6 0.31 -0.3
63 AT5G47030 ATPase, F1 complex, delta/epsilon subunit -0.6 0.31 -0.32
64 AT3G53370 S1FA-like DNA-binding protein -0.59 0.3 -0.31
65 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 -0.59 0.3 -0.31
66 AT1G52100 Mannose-binding lectin superfamily protein -0.59 0.32 -0.31
67 AT5G10620 methyltransferases -0.59 0.31 -0.3
68 AT3G56670 BEST Arabidopsis thaliana protein match is: F-box and
associated interaction domains-containing protein
(TAIR:AT1G32420.1); Has 58 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.31
69 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.59 0.29 -0.33
70 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.34 -0.32
71 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 0.58 0.3 -0.3
72 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 -0.58 0.33 -0.35
73 AT4G13630 Protein of unknown function, DUF593 -0.58 0.33 -0.31
74 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 -0.58 0.3 -0.3
75 AT4G13050 Acyl-ACP thioesterase -0.58 0.32 -0.32
76 AT4G29960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.58 0.3 -0.32
77 AT5G37830 oxoprolinase 1 oxoprolinase 1 -0.57 0.32 -0.32
78 AT1G70330 equilibrative nucleotide transporter 1 equilibrative nucleotide
transporter 1, equilibrative
nucleotide transporter 1		 -0.57 0.31 -0.32
79 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.31
80 AT4G04870 cardiolipin synthase cardiolipin synthase -0.57 0.33 -0.31
81 AT5G39950 thioredoxin 2 Arabidopsis thioredoxin h2,
thioredoxin 2, ATTRXH2,
thioredoxin 2, THIOREDOXIN H2		 -0.57 0.33 -0.31
82 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 -0.57 0.32 -0.31
83 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 -0.57 0.3 -0.34
84 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 -0.57 0.31 -0.36
85 AT5G40270 HD domain-containing metal-dependent phosphohydrolase
family protein		 -0.57 0.31 -0.3
86 AT3G20870 ZIP metal ion transporter family zinc transporter 29 -0.57 0.31 -0.32
87 AT1G63290 Aldolase-type TIM barrel family protein -0.57 0.34 -0.31
88 AT4G22310 Uncharacterised protein family (UPF0041) -0.57 0.31 -0.31
89 AT1G21720 proteasome beta subunit C1 proteasome beta subunit C1 -0.57 0.32 -0.3
90 AT1G71440 tubulin folding cofactor E / Pfifferling (PFI) PFIFFERLING, TUBULIN-FOLDING
COFACTOR E		 -0.56 0.33 -0.31
91 AT5G42280 Cysteine/Histidine-rich C1 domain family protein -0.56 0.32 -0.3
92 AT3G15720 Pectin lyase-like superfamily protein 0.56 0.31 -0.3
93 AT5G62900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.34 -0.3
94 AT5G24360 inositol requiring 1-1 ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-1, AtIRE1b, inositol
requiring 1-1		 -0.56 0.32 -0.31
95 AT5G06190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58540.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.56 0.31 -0.32
96 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.31 -0.3
97 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 0.56 0.32 -0.3
98 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein -0.56 0.34 -0.32
99 AT1G70060 SIN3-like 4 SIN3-like 4 -0.56 0.32 -0.29
100 AT5G02740 Ribosomal protein S24e family protein -0.56 0.33 -0.31
101 AT1G51440 alpha/beta-Hydrolases superfamily protein -0.56 0.3 -0.29
102 AT5G54750 Transport protein particle (TRAPP) component -0.56 0.35 -0.32
103 AT3G56720 unknown protein; Has 6239 Blast hits to 4635 proteins in
365 species: Archae - 6; Bacteria - 230; Metazoa - 3389;
Fungi - 659; Plants - 656; Viruses - 13; Other Eukaryotes -
1286 (source: NCBI BLink).		 0.55 0.32 -0.33
104 AT4G22280 F-box/RNI-like superfamily protein 0.55 0.31 -0.3
105 AT1G52920 G protein coupled receptor G-PROTEIN COUPLED RECEPTOR 2, G
protein coupled receptor		 0.55 0.3 -0.33
106 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 0.55 0.31 -0.31
107 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 0.54 0.31 -0.32
108 AT4G23840 Leucine-rich repeat (LRR) family protein 0.54 0.3 -0.32
109 AT4G31570 CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins
in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa -
84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other
Eukaryotes - 38623 (source: NCBI BLink).		 0.54 0.31 -0.33
110 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 0.53 0.33 -0.31
111 AT1G13230 Leucine-rich repeat (LRR) family protein 0.53 0.3 -0.33
112 AT3G30800 transposable element gene 0.52 0.32 -0.33
113 AT1G64100 pentatricopeptide (PPR) repeat-containing protein 0.52 0.31 -0.31
114 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 0.52 0.3 -0.31
115 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 0.51 0.32 -0.31
116 AT5G25120 ytochrome p450, family 71, subfamily B, polypeptide 11 ytochrome p450, family 71,
subfamily B, polypeptide 11		 0.51 0.33 -0.34
117 AT5G18690 arabinogalactan protein 25 arabinogalactan protein 25,
ARABIDOPSIS THALIANA
ARABINOGALACTAN PROTEINS 25		 0.51 0.3 -0.32
118 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 0.51 0.3 -0.29
119 AT5G52070 Agenet domain-containing protein 0.51 0.32 -0.31
120 AT1G52770 Phototropic-responsive NPH3 family protein 0.5 0.32 -0.32
121 AT4G29770 Target of trans acting-siR480/255. 0.5 0.31 -0.3
122 AT4G27050 F-box/RNI-like superfamily protein 0.5 0.32 -0.32
123 AT1G29630 5'-3' exonuclease family protein 0.49 0.31 -0.29
124 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 0.48 0.32 -0.32
125 AT1G34070 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein
(InterPro:IPR005162); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast
hits to 647 proteins in 29 species: Archae - 0; Bacteria -
0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 0.48 0.31 -0.31
126 AT3G43150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.48 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
127 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.92 0.49 -0.43 C0038
128 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.88 0.45 -0.48 C0033
129 C0183 MST_3033.1 - - - -0.82 0.46 -0.46
130 C0132 Kaempferol-3-O-rutinoside - - - 0.65 0.46 -0.44