AT5G23110 : -
Query Information
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AGICode AT5G23110
Description Zinc finger, C3HC4 type (RING finger) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 1 0.32 -0.32
2 AT5G05570 transducin family protein / WD-40 repeat family protein 0.79 0.32 -0.31
3 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 -0.76 0.31 -0.31
4 AT1G50030 target of rapamycin target of rapamycin 0.76 0.31 -0.33
5 AT2G42100 Actin-like ATPase superfamily protein -0.76 0.31 -0.35
6 AT4G32640 Sec23/Sec24 protein transport family protein 0.75 0.32 -0.31
7 AT4G11380 Adaptin family protein 0.75 0.31 -0.3
8 AT2G07360 SH3 domain-containing protein 0.74 0.32 -0.31
9 AT5G43130 TBP-associated factor 4 TBP-associated factor 4,
TBP-associated factor 4B		 0.74 0.3 -0.33
10 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.72 0.31 -0.32
11 AT1G02890 AAA-type ATPase family protein 0.72 0.31 -0.33
12 AT3G15980 Coatomer, beta' subunit 0.71 0.31 -0.3
13 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.71 0.31 -0.29
14 AT1G71820 SEC6 SEC6 0.71 0.31 -0.31
15 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.71 0.33 -0.31
16 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS -0.71 0.33 -0.32
17 AT3G25100 cell division cycle 45 cell division cycle 45 -0.7 0.31 -0.3
18 AT3G52640 Zn-dependent exopeptidases superfamily protein 0.7 0.33 -0.32
19 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 0.7 0.3 -0.34
20 AT5G58410 HEAT/U-box domain-containing protein 0.7 0.32 -0.31
21 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 0.7 0.29 -0.31
22 AT1G02080 transcription regulators 0.7 0.32 -0.32
23 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 0.7 0.32 -0.32
24 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.7 0.3 -0.34
25 ATMG00640 hydrogen ion transporting ATP synthases, rotational
mechanism;zinc ion binding		 ORF25 0.7 0.31 -0.33
26 AT1G07510 FTSH protease 10 FTSH protease 10 0.69 0.32 -0.34
27 AT1G29140 Pollen Ole e 1 allergen and extensin family protein 0.69 0.32 -0.33
28 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.69 0.33 -0.32
29 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 0.69 0.31 -0.3
30 AT2G38160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits
to 731 proteins in 211 species: Archae - 0; Bacteria - 236;
Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32;
Other Eukaryotes - 91 (source: NCBI BLink).		 -0.69 0.31 -0.32
31 AT1G31730 Adaptin family protein 0.69 0.33 -0.31
32 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.68 0.32 -0.3
33 AT5G55040 DNA-binding bromodomain-containing protein 0.68 0.33 -0.3
34 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.68 0.36 -0.31
35 ATMG00580 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 0.68 0.29 -0.28
36 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.68 0.32 -0.32
37 AT4G05420 damaged DNA binding protein 1A damaged DNA binding protein 1A 0.68 0.32 -0.31
38 AT4G00660 RNAhelicase-like 8 ATRH8, RNAhelicase-like 8 0.68 0.29 -0.31
39 AT1G77600 ARM repeat superfamily protein 0.68 0.33 -0.31
40 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.67 0.31 -0.32
41 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.67 0.3 -0.32
42 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B		 -0.67 0.3 -0.3
43 AT1G35740 pseudogene, similar to putative beta-1,3-glucan synthase,
blastp match of 57% identity and 2.1e-14 P-value to
GP|23503034|gb|AAK49452.2|AF304372_1|AF304372 putative
beta-1,3-glucan synthase {Nicotiana alata}		 -0.67 0.32 -0.31
44 AT3G27400 Pectin lyase-like superfamily protein -0.67 0.32 -0.34
45 AT3G30260 AGAMOUS-like 79 AGAMOUS-like 79 -0.67 0.32 -0.31
46 AT1G10390 Nucleoporin autopeptidase 0.67 0.33 -0.31
47 AT4G37770 1-amino-cyclopropane-1-carboxylate synthase 8 1-amino-cyclopropane-1-carboxylate
synthase 8		 -0.67 0.34 -0.33
48 AT1G52320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
plasma membrane; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF632
(InterPro:IPR006867); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF630 and DUF632)
(TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in
62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi -
2; Plants - 427; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.66 0.31 -0.3
49 AT1G32130 Transcription elongation factor (TFIIS) family protein ARABIDOPSIS THALIANA IWS1 (FROM
YEAST INTERACTS WITH SPT6), HIGH
NITROGEN INSENSITIVE 9, IWS1		 0.66 0.31 -0.31
50 AT1G04300 TRAF-like superfamily protein 0.66 0.32 -0.33
51 AT5G27970 ARM repeat superfamily protein 0.66 0.34 -0.31
52 AT5G08560 transducin family protein / WD-40 repeat family protein 0.66 0.32 -0.32
53 AT3G58640 Mitogen activated protein kinase kinase kinase-related 0.66 0.32 -0.32
54 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.66 0.31 -0.32
55 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.3 -0.31
56 AT4G02480 AAA-type ATPase family protein 0.65 0.31 -0.31
57 AT4G14220 RING-H2 group F1A RING-H2 group F1A 0.65 0.31 -0.29
58 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.65 0.32 -0.34
59 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.65 0.32 -0.31
60 AT5G67270 end binding protein 1C MICROTUBULE END BINDING PROTEIN 1,
ATEB1-HOMOLOG1, end binding
protein 1C		 -0.65 0.31 -0.32
61 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.65 0.3 -0.32
62 AT3G06370 sodium hydrogen exchanger 4 ATNHX4, sodium hydrogen exchanger
4		 -0.64 0.33 -0.31
63 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.64 0.31 -0.31
64 AT4G09550 AtGCP3 interacting protein 1 ARABIDOPSIS ATGCP3 INTERACTING
PROTEIN 1, AtGCP3 interacting
protein 1		 -0.64 0.3 -0.31
65 AT3G07100 Sec23/Sec24 protein transport family protein AtSEC24A, ENDOPLASMIC RETICULUM
MORPHOLOGY 2, SEC24A		 0.64 0.32 -0.32
66 AT4G01390 TRAF-like family protein -0.64 0.32 -0.3
67 AT5G67470 formin homolog 6 ARABIDOPSIS FORMIN HOMOLOG 6,
formin homolog 6		 0.64 0.32 -0.32
68 AT1G77890 DNA-directed RNA polymerase II protein 0.64 0.3 -0.32
69 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.29 -0.32
70 AT2G19390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G29790.1); Has 203 Blast hits
to 188 proteins in 60 species: Archae - 0; Bacteria - 11;
Metazoa - 24; Fungi - 34; Plants - 93; Viruses - 0; Other
Eukaryotes - 41 (source: NCBI BLink).		 0.64 0.3 -0.29
71 AT4G20300 Protein of unknown function (DUF1639) 0.64 0.33 -0.3
72 AT2G03140 alpha/beta-Hydrolases superfamily protein 0.63 0.3 -0.31
73 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.63 0.34 -0.3
74 AT2G39260 binding;RNA binding 0.63 0.32 -0.33
75 AT4G34310 alpha/beta-Hydrolases superfamily protein 0.63 0.3 -0.31
76 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.63 0.32 -0.31
77 AT4G36140 disease resistance protein (TIR-NBS-LRR class), putative 0.63 0.32 -0.29
78 AT5G23450 long-chain base (LCB) kinase 1 long-chain base (LCB) kinase 1,
long-chain base (LCB) kinase 1		 0.63 0.3 -0.29
79 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.63 0.31 -0.3
80 AT3G20910 nuclear factor Y, subunit A9 nuclear factor Y, subunit A9 0.63 0.34 -0.3
81 AT3G21640 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 ATFKBP42, FK506-BINDING PROTEIN
42, TWISTED DWARF 1, ULTRACURVATA
2		 -0.62 0.33 -0.29
82 AT2G45540 WD-40 repeat family protein / beige-related 0.62 0.31 -0.3
83 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 0.62 0.33 -0.31
84 AT2G18915 LOV KELCH protein 2 ADAGIO 2, LOV KELCH protein 2 0.62 0.3 -0.33
85 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein 0.62 0.32 -0.28
86 AT4G25580 CAP160 protein 0.62 0.32 -0.34
87 AT5G24710 Transducin/WD40 repeat-like superfamily protein 0.62 0.31 -0.32
88 AT1G62560 flavin-monooxygenase glucosinolate S-oxygenase 3 flavin-monooxygenase glucosinolate
S-oxygenase 3		 -0.62 0.32 -0.3
89 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 0.62 0.29 -0.35
90 AT3G15430 Regulator of chromosome condensation (RCC1) family protein 0.62 0.3 -0.31
91 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.62 0.32 -0.33
92 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.62 0.33 -0.3
93 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.62 0.29 -0.32
94 AT3G43300 HOPM interactor 7 HOPM interactor 7, BFA-VISUALIZED
ENDOCYTIC TRAFFICKING DEFECTIVE1		 0.62 0.29 -0.3
95 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 -0.61 0.32 -0.31
96 AT1G75600 Histone superfamily protein -0.6 0.29 -0.29
97 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.6 0.31 -0.32
98 AT1G13470 Protein of unknown function (DUF1262) -0.59 0.32 -0.34
99 AT5G47440 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.59 0.31 -0.32
100 AT3G19540 Protein of unknown function (DUF620) -0.59 0.32 -0.33
101 AT4G23730 Galactose mutarotase-like superfamily protein -0.58 0.32 -0.3
102 AT5G03970 F-box associated ubiquitination effector family protein -0.58 0.31 -0.32
103 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.31 -0.3
104 AT5G41400 RING/U-box superfamily protein -0.58 0.31 -0.31
105 AT1G75890 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.31 -0.3
106 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family -0.56 0.33 -0.31
107 AT2G20805 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT1G11510.1); Has 47 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.3 -0.32
108 AT5G08170 porphyromonas-type peptidyl-arginine deiminase family
protein		 AGMATINE IMINOHYDROLASE, EMBRYO
DEFECTIVE 1873		 -0.56 0.31 -0.3
109 AT4G17980 NAC domain containing protein 71 NAC domain containing protein 71,
NAC domain containing protein 71		 -0.56 0.3 -0.34
110 AT4G35620 Cyclin B2;2 Cyclin B2;2 -0.56 0.34 -0.32
111 AT2G20625 Protein of unknown function (DUF626) -0.56 0.32 -0.32
112 AT5G48550 F-box associated ubiquitination effector family protein -0.56 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0074 Cystine L-Cystine L-Cystine protein precursor 0.76 0.46 -0.45 C0074
114 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.71 0.45 -0.48 C0252