AT5G19030 : -
Query Information
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AGICode AT5G19030
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G19030 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.34 -0.32
2 AT3G51780 BCL-2-associated athanogene 4 BCL-2-associated athanogene 4,
BCL-2-associated athanogene 4		 0.82 0.31 -0.33
3 AT4G10790 UBX domain-containing protein 0.78 0.3 -0.31
4 AT1G74640 alpha/beta-Hydrolases superfamily protein 0.77 0.33 -0.32
5 AT3G53000 phloem protein 2-A15 phloem protein 2-A15, phloem
protein 2-A15		 0.76 0.35 -0.33
6 AT1G63100 GRAS family transcription factor -0.76 0.31 -0.3
7 AT1G04030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits
to 1511 proteins in 238 species: Archae - 7; Bacteria -
164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses -
22; Other Eukaryotes - 943 (source: NCBI BLink).		 -0.75 0.32 -0.32
8 AT1G02750 Drought-responsive family protein 0.75 0.31 -0.31
9 AT4G21160 Calcium-dependent ARF-type GTPase activating protein family ARF-GAP domain 12, ZAC 0.75 0.32 -0.3
10 AT3G22790 Kinase interacting (KIP1-like) family protein -0.75 0.33 -0.32
11 AT5G58020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF602 (InterPro:IPR006735); Has 385 Blast
hits to 385 proteins in 189 species: Archae - 0; Bacteria -
0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0;
Other Eukaryotes - 65 (source: NCBI BLink).		 0.75 0.31 -0.31
12 AT2G23530 Zinc-finger domain of monoamine-oxidase A repressor R1 -0.74 0.34 -0.31
13 AT5G08190 nuclear factor Y, subunit B12 nuclear factor Y, subunit B12 0.74 0.32 -0.3
14 AT1G15860 Domain of unknown function (DUF298) 0.74 0.32 -0.31
15 AT2G33220 GRIM-19 protein 0.74 0.29 -0.34
16 AT5G23170 Protein kinase superfamily protein -0.74 0.3 -0.31
17 AT2G26180 IQ-domain 6 IQ-domain 6 -0.73 0.31 -0.3
18 AT5G01960 RING/U-box superfamily protein 0.73 0.31 -0.32
19 AT4G25240 SKU5 similar 1 SKU5 similar 1 -0.73 0.31 -0.33
20 AT5G03340 ATPase, AAA-type, CDC48 protein 0.72 0.31 -0.31
21 AT1G68070 Zinc finger, C3HC4 type (RING finger) family protein 0.72 0.32 -0.33
22 AT4G25880 pumilio 6 pumilio 6, pumilio 6 -0.72 0.32 -0.29
23 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 0.72 0.33 -0.3
24 AT3G54220 GRAS family transcription factor SCARECROW, SHOOT GRAVITROPISM 1 -0.72 0.31 -0.31
25 AT4G34120 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 2,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 1, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 1		 0.72 0.29 -0.33
26 AT1G01230 ORMDL family protein 0.71 0.32 -0.32
27 AT3G12950 Trypsin family protein -0.71 0.31 -0.33
28 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 -0.71 0.33 -0.3
29 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.71 0.32 -0.3
30 AT1G72460 Leucine-rich repeat protein kinase family protein 0.71 0.31 -0.3
31 AT4G11130 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2,
SILENCING MOVEMENT DEFICIENT 1		 -0.71 0.31 -0.33
32 AT1G19120 Small nuclear ribonucleoprotein family protein 0.71 0.31 -0.33
33 AT5G43860 chlorophyllase 2 ARABIDOPSIS THALIANA
CHLOROPHYLLASE 2, chlorophyllase 2		 0.71 0.3 -0.32
34 AT5G61210 soluble N-ethylmaleimide-sensitive factor adaptor protein
33		 ATSNAP33, ATSNAP33B, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 33, SNP33		 0.71 0.3 -0.32
35 AT4G07790 transposable element gene 0.71 0.31 -0.3
36 AT3G17360 phragmoplast orienting kinesin 1 phragmoplast orienting kinesin 1 -0.7 0.32 -0.32
37 AT1G28250 unknown protein; Has 22 Blast hits to 22 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.29 -0.31
38 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.7 0.31 -0.32
39 AT4G31910 HXXXD-type acyl-transferase family protein -0.7 0.33 -0.31
40 AT1G03970 G-box binding factor 4 G-box binding factor 4 0.69 0.31 -0.33
41 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 -0.69 0.35 -0.28
42 AT5G05850 plant intracellular ras group-related LRR 1 plant intracellular ras
group-related LRR 1		 0.69 0.29 -0.31
43 AT4G10330 glycine-rich protein 0.69 0.32 -0.31
44 AT2G36680 Modifier of rudimentary (Mod(r)) protein 0.69 0.29 -0.3
45 AT1G77680 Ribonuclease II/R family protein -0.69 0.3 -0.32
46 AT1G64820 MATE efflux family protein 0.69 0.31 -0.33
47 AT3G07540 Actin-binding FH2 (formin homology 2) family protein -0.69 0.3 -0.33
48 AT2G25820 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 2 0.69 0.33 -0.32
49 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.68 0.32 -0.31
50 AT1G21090 Cupredoxin superfamily protein -0.68 0.33 -0.29
51 AT5G62910 RING/U-box superfamily protein 0.68 0.32 -0.31
52 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.68 0.34 -0.32
53 AT1G28540 unknown protein; Has 25 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.31 -0.3
54 AT5G63220 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0363
(InterPro:IPR007317); Has 304 Blast hits to 301 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi
- 121; Plants - 35; Viruses - 0; Other Eukaryotes - 38
(source: NCBI BLink).		 0.68 0.35 -0.33
55 AT4G39910 ubiquitin-specific protease 3 ubiquitin-specific protease 3,
ubiquitin-specific protease 3		 0.68 0.3 -0.33
56 AT3G53240 receptor like protein 45 receptor like protein 45, receptor
like protein 45		 -0.67 0.32 -0.31
57 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 0.67 0.33 -0.32
58 AT3G53690 RING/U-box superfamily protein 0.67 0.31 -0.31
59 AT1G55200 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.67 0.31 -0.33
60 AT2G45980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ATG8-interacting protein 1 0.67 0.29 -0.29
61 AT1G67710 response regulator 11 response regulator 11 -0.67 0.3 -0.33
62 AT4G22950 AGAMOUS-like 19 AGAMOUS-like 19, GL19 -0.67 0.32 -0.31
63 AT3G48070 RING/U-box superfamily protein 0.67 0.32 -0.31
64 AT5G11740 arabinogalactan protein 15 arabinogalactan protein 15,
ATAGP15		 0.67 0.32 -0.31
65 AT2G33390 unknown protein; Has 34 Blast hits to 34 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.67 0.31 -0.32
66 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.67 0.32 -0.31
67 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 0.67 0.31 -0.31
68 AT3G13662 Disease resistance-responsive (dirigent-like protein)
family protein		 0.67 0.3 -0.31
69 AT4G32780 phosphoinositide binding -0.67 0.32 -0.32
70 AT3G28480 Oxoglutarate/iron-dependent oxygenase 0.67 0.31 -0.31
71 AT3G25710 basic helix-loop-helix 32 ATAIG1, basic helix-loop-helix 32,
TARGET OF MONOPTEROS 5		 -0.67 0.31 -0.32
72 AT5G09950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.33 -0.31
73 AT1G28030 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.66 0.31 -0.32
74 AT4G00340 receptor-like protein kinase 4 receptor-like protein kinase 4 -0.66 0.32 -0.3
75 AT2G35700 ERF family protein 38 ERF FAMILY PROTEIN 38, ERF family
protein 38		 0.66 0.31 -0.31
76 AT2G10970 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.66 0.3 -0.31
77 AT3G29200 chorismate mutase 1 ARABIDOPSIS THALIANA CHORISMATE
MUTASE 1, chorismate mutase 1		 0.66 0.3 -0.31
78 AT4G16500 Cystatin/monellin superfamily protein 0.66 0.31 -0.32
79 AT5G49550 Putative homolog of mammalian BLOC-1 Subunit 2. Protein -
protein interaction with BLOS1.		 BLOC subunit 2 0.66 0.3 -0.29
80 AT2G41410 Calcium-binding EF-hand family protein 0.66 0.31 -0.33
81 AT1G02270 Calcium-binding endonuclease/exonuclease/phosphatase family 0.66 0.3 -0.31
82 AT4G32950 Protein phosphatase 2C family protein 0.66 0.3 -0.29
83 AT5G51260 HAD superfamily, subfamily IIIB acid phosphatase 0.66 0.33 -0.3
84 AT5G03870 Glutaredoxin family protein -0.66 0.32 -0.32
85 AT3G11520 CYCLIN B1;3 CYCLIN 2, CYCLIN B1;3 -0.66 0.32 -0.3
86 AT4G37740 growth-regulating factor 2 growth-regulating factor 2,
growth-regulating factor 2		 -0.65 0.33 -0.31
87 AT5G55820 CONTAINS InterPro DOMAIN/s: Inner centromere protein,
ARK-binding region (InterPro:IPR005635); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 WYRD -0.65 0.29 -0.32
88 AT5G60690 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 INTERFASCICULAR FIBERLESS,
INTERFASCICULAR FIBERLESS 1,
REVOLUTA		 -0.65 0.35 -0.31
89 AT2G35160 SU(VAR)3-9 homolog 5 SET DOMAIN-CONTAINING PROTEIN 9,
SU(VAR)3-9 homolog 5		 -0.65 0.33 -0.31
90 AT3G16060 ATP binding microtubule motor family protein -0.65 0.29 -0.31
91 AT1G28110 serine carboxypeptidase-like 45 serine carboxypeptidase-like 45 -0.65 0.33 -0.33
92 AT4G02290 glycosyl hydrolase 9B13 glycosyl hydrolase 9B13, glycosyl
hydrolase 9B13		 -0.65 0.32 -0.33
93 AT1G74110 cytochrome P450, family 78, subfamily A, polypeptide 10 cytochrome P450, family 78,
subfamily A, polypeptide 10		 -0.64 0.31 -0.31
94 AT3G03370 BEST Arabidopsis thaliana protein match is: DegP protease 7
(TAIR:AT3G03380.1); Has 55 Blast hits to 55 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.34 -0.31
95 AT1G18610 Galactose oxidase/kelch repeat superfamily protein -0.64 0.31 -0.33
96 AT5G54670 kinesin 3 kinesin 3, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA C		 -0.64 0.31 -0.32
97 AT2G33310 auxin-induced protein 13 auxin-induced protein 13 -0.63 0.31 -0.32
98 AT5G19870 Family of unknown function (DUF716) -0.63 0.32 -0.33
99 AT1G72290 Kunitz family trypsin and protease inhibitor protein -0.63 0.31 -0.31
100 AT2G21050 like AUXIN RESISTANT 2 like AUXIN RESISTANT 2 -0.63 0.3 -0.29
101 AT2G26360 Mitochondrial substrate carrier family protein -0.63 0.32 -0.29
102 AT3G57950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, petal differentiation
and expansion stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast
hits to 81 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.34 -0.31
103 AT2G18120 SHI-related sequence 4 SHI-related sequence 4 -0.63 0.32 -0.33
104 AT1G48670 auxin-responsive GH3 family protein -0.62 0.34 -0.33
105 AT3G27330 zinc finger (C3HC4-type RING finger) family protein -0.62 0.3 -0.31
106 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 -0.62 0.32 -0.32
107 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 -0.62 0.32 -0.3
108 AT4G20390 Uncharacterised protein family (UPF0497) -0.61 0.33 -0.34
109 AT2G44830 Protein kinase superfamily protein -0.61 0.31 -0.33
110 AT1G57590 Pectinacetylesterase family protein -0.61 0.32 -0.33
111 AT5G38950 RmlC-like cupins superfamily protein -0.61 0.3 -0.3
112 AT4G26870 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.61 0.31 -0.33
113 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.61 0.32 -0.31
114 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 -0.61 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		-0.72 0.42 -0.43 C0063
116 C0103 Glutaric acid - - - -0.67 0.42 -0.41