AGICode | AT5G18440 |
Description | CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G18440 | CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental retardation-interacting protein 1, conserved region (InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339; Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes - 619 (source: NCBI BLink). |
AtNUFIP, nuclear FMRP-interacting protein |
1 | 0.3 | -0.3 | ||
2 | AT2G31360 | 16:0delta9 desaturase 2 | 16:0delta9 desaturase 2, 16:0delta9 desaturase 2 |
0.83 | 0.32 | -0.34 | ||
3 | AT3G04470 | Ankyrin repeat family protein | 0.83 | 0.32 | -0.31 | |||
4 | AT3G49990 | unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source: NCBI BLink). |
0.82 | 0.31 | -0.32 | |||
5 | AT3G13570 | SC35-like splicing factor 30A | SC35-like splicing factor 30A, SC35-like splicing factor 30A |
0.81 | 0.3 | -0.3 | ||
6 | AT1G13030 | sphere organelles protein-related | 0.81 | 0.33 | -0.31 | |||
7 | AT3G11964 | RNA binding;RNA binding | 0.81 | 0.32 | -0.3 | |||
8 | AT4G10760 | mRNAadenosine methylase | EMBRYO DEFECTIVE 1706, mRNAadenosine methylase |
0.8 | 0.32 | -0.33 | ||
9 | AT3G15460 | Ribosomal RNA processing Brix domain protein | 0.8 | 0.32 | -0.32 | |||
10 | AT1G32440 | plastidial pyruvate kinase 3 | plastidial pyruvate kinase 3 | 0.79 | 0.31 | -0.31 | ||
11 | AT4G27720 | Major facilitator superfamily protein | 0.79 | 0.31 | -0.3 | |||
12 | AT3G55510 | Noc2p family | REBELOTE | 0.79 | 0.33 | -0.33 | ||
13 | AT2G04940 | scramblase-related | -0.79 | 0.33 | -0.33 | |||
14 | AT1G03530 | nuclear assembly factor 1 | ATNAF1, nuclear assembly factor 1 | 0.78 | 0.33 | -0.31 | ||
15 | AT2G40430 | CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 709 Blast hits to 643 proteins in 201 species: Archae - 0; Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). |
0.78 | 0.3 | -0.32 | |||
16 | AT1G36310 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.78 | 0.31 | -0.31 | |||
17 | AT1G10490 | Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) |
0.78 | 0.31 | -0.33 | |||
18 | AT1G54380 | spliceosome protein-related | 0.78 | 0.35 | -0.32 | |||
19 | AT3G53500 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
arginine/serine-rich zinc knuckle-containing protein 32, arginine/serine-rich zinc knuckle-containing protein 32, arginine/serine-rich zinc knuckle-containing protein 32 |
0.78 | 0.32 | -0.31 | ||
20 | AT1G53035 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.3 | -0.32 | |||
21 | AT5G05210 | Surfeit locus protein 6 | 0.76 | 0.31 | -0.32 | |||
22 | AT5G09250 | ssDNA-binding transcriptional regulator | KIWI | 0.76 | 0.32 | -0.32 | ||
23 | AT2G31650 | homologue of trithorax | homologue of trithorax, SET DOMAIN PROTEIN 27 |
0.76 | 0.31 | -0.31 | ||
24 | AT5G65760 | Serine carboxypeptidase S28 family protein | -0.75 | 0.3 | -0.33 | |||
25 | AT5G12200 | pyrimidine 2 | pyrimidine 2 | -0.75 | 0.32 | -0.32 | ||
26 | AT1G69950 | transposable element gene | 0.75 | 0.32 | -0.31 | |||
27 | AT3G44110 | DNAJ homologue 3 | ATJ, DNAJ homologue 3, J3 | 0.75 | 0.32 | -0.32 | ||
28 | AT1G11240 | CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink). |
0.75 | 0.34 | -0.3 | |||
29 | AT2G28720 | Histone superfamily protein | 0.75 | 0.3 | -0.31 | |||
30 | AT1G48580 | unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.75 | 0.29 | -0.33 | |||
31 | AT2G02880 | mucin-related | 0.75 | 0.31 | -0.32 | |||
32 | AT5G50315 | transposable element gene | 0.74 | 0.32 | -0.29 | |||
33 | AT1G75990 | PAM domain (PCI/PINT associated module) protein | 0.74 | 0.3 | -0.32 | |||
34 | AT5G18850 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.74 | 0.31 | -0.32 | |||
35 | AT4G20890 | tubulin beta-9 chain | tubulin beta-9 chain | 0.74 | 0.31 | -0.32 | ||
36 | AT3G49240 | Pentatricopeptide repeat (PPR) superfamily protein | embryo defective 1796 | 0.74 | 0.31 | -0.33 | ||
37 | AT5G41060 | DHHC-type zinc finger family protein | 0.74 | 0.32 | -0.32 | |||
38 | AT1G53560 | Ribosomal protein L18ae family | -0.74 | 0.32 | -0.31 | |||
39 | AT5G66540 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: cytosol, nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U3 small nucleolar ribonucleoprotein complex, subunit Mpp10p (InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.73 | 0.31 | -0.3 | |||
40 | AT5G18250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.73 | 0.31 | -0.31 | |||
41 | AT1G51610 | Cation efflux family protein | 0.73 | 0.31 | -0.33 | |||
42 | AT5G56740 | histone acetyltransferase of the GNAT family 2 | HAC07, HAC7, HAG02, histone acetyltransferase of the GNAT family 2 |
0.73 | 0.33 | -0.32 | ||
43 | AT5G28150 | Plant protein of unknown function (DUF868) | 0.73 | 0.3 | -0.31 | |||
44 | AT3G62650 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.31 | -0.32 | |||
45 | AT5G26600 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
-0.72 | 0.32 | -0.31 | |||
46 | AT1G77030 | hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases |
0.72 | 0.32 | -0.31 | |||
47 | AT4G35310 | calmodulin-domain protein kinase 5 | ATCPK5, calmodulin-domain protein kinase 5 |
0.71 | 0.32 | -0.3 | ||
48 | AT4G28480 | DNAJ heat shock family protein | 0.71 | 0.32 | -0.3 | |||
49 | AT1G55850 | cellulose synthase like E1 | ATCSLE1, cellulose synthase like E1 |
-0.71 | 0.32 | -0.3 | ||
50 | AT1G80180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.71 | 0.31 | -0.3 | |||
51 | AT1G55020 | lipoxygenase 1 | ARABIDOPSIS LIPOXYGENASE 1, lipoxygenase 1 |
-0.71 | 0.31 | -0.35 | ||
52 | AT4G37210 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.71 | 0.32 | -0.33 | |||
53 | AT3G53180 | glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases |
nodulin/glutamine synthase-like protein |
-0.71 | 0.31 | -0.3 | ||
54 | AT1G48430 | Dihydroxyacetone kinase | -0.7 | 0.33 | -0.31 | |||
55 | AT3G05660 | receptor like protein 33 | receptor like protein 33, receptor like protein 33 |
0.7 | 0.29 | -0.33 | ||
56 | AT3G48250 | Pentatricopeptide repeat (PPR) superfamily protein | Buthionine sulfoximine-insensitive roots 6 |
0.7 | 0.32 | -0.34 | ||
57 | AT1G09350 | galactinol synthase 3 | galactinol synthase 3, galactinol synthase 3 |
0.7 | 0.29 | -0.33 | ||
58 | AT1G17130 | Family of unknown function (DUF572) | 0.7 | 0.33 | -0.31 | |||
59 | AT3G17830 | Molecular chaperone Hsp40/DnaJ family protein | 0.7 | 0.32 | -0.31 | |||
60 | AT1G77420 | alpha/beta-Hydrolases superfamily protein | -0.7 | 0.31 | -0.34 | |||
61 | AT5G42420 | Nucleotide-sugar transporter family protein | 0.7 | 0.34 | -0.31 | |||
62 | AT4G39260 | cold, circadian rhythm, and RNA binding 1 | GLYCINE-RICH PROTEIN 8, cold, circadian rhythm, and RNA binding 1, glycine-rich RNA-binding protein 8, GRP8 |
0.7 | 0.33 | -0.33 | ||
63 | AT2G31010 | Protein kinase superfamily protein | 0.69 | 0.33 | -0.3 | |||
64 | AT3G01360 | Family of unknown function (DUF716) | -0.69 | 0.33 | -0.31 | |||
65 | AT3G14790 | rhamnose biosynthesis 3 | ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 3, rhamnose biosynthesis 3 |
0.69 | 0.32 | -0.34 | ||
66 | AT1G04440 | casein kinase like 13 | casein kinase like 13 | -0.69 | 0.32 | -0.34 | ||
67 | AT3G16230 | Predicted eukaryotic LigT | -0.69 | 0.32 | -0.32 | |||
68 | AT3G06910 | UB-like protease 1A | AtULP1a, ESD4-LIKE SUMO PROTEASE 1, UB-like protease 1A |
0.69 | 0.32 | -0.31 | ||
69 | AT5G18170 | glutamate dehydrogenase 1 | glutamate dehydrogenase 1 | -0.69 | 0.33 | -0.3 | ||
70 | AT3G28050 | nodulin MtN21 /EamA-like transporter family protein | -0.69 | 0.31 | -0.32 | |||
71 | AT3G23200 | Uncharacterised protein family (UPF0497) | -0.69 | 0.3 | -0.31 | |||
72 | AT1G56700 | Peptidase C15, pyroglutamyl peptidase I-like | -0.69 | 0.3 | -0.32 | |||
73 | AT1G07360 | CCCH-type zinc fingerfamily protein with RNA-binding domain | MOS4-associated complex subunit 5A | 0.69 | 0.31 | -0.32 | ||
74 | AT5G63630 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.69 | 0.32 | -0.33 | |||
75 | AT2G39000 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | -0.69 | 0.31 | -0.33 | |||
76 | AT1G18330 | Homeodomain-like superfamily protein | EARLY-PHYTOCHROME-RESPONSIVE1, REVEILLE 7 |
0.69 | 0.31 | -0.31 | ||
77 | AT3G28270 | Protein of unknown function (DUF677) | -0.68 | 0.3 | -0.32 | |||
78 | AT1G09415 | NIM1-interacting 3 | NIM1-interacting 3 | -0.68 | 0.33 | -0.31 | ||
79 | AT2G23780 | RING/U-box superfamily protein | -0.68 | 0.32 | -0.3 | |||
80 | AT3G16857 | response regulator 1 | response regulator 1, response regulator 1 |
-0.68 | 0.31 | -0.31 | ||
81 | AT2G25350 | Phox (PX) domain-containing protein | -0.68 | 0.32 | -0.32 | |||
82 | AT5G28020 | cysteine synthase D2 | CYSTEINE SYNTHASE D2, cysteine synthase D2 |
-0.67 | 0.31 | -0.35 | ||
83 | AT3G13672 | TRAF-like superfamily protein | -0.67 | 0.32 | -0.31 | |||
84 | AT5G48810 | cytochrome B5 isoform D | ATB5-B, ARABIDOPSIS CYTOCHROME B5 ISOFORM D, B5 #3, cytochrome B5 isoform D |
-0.66 | 0.31 | -0.32 | ||
85 | AT5G47720 | Thiolase family protein | -0.66 | 0.31 | -0.33 | |||
86 | AT2G25280 | CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). |
-0.66 | 0.31 | -0.31 | |||
87 | AT4G26980 | RNI-like superfamily protein | -0.65 | 0.31 | -0.31 | |||
88 | AT2G30500 | Kinase interacting (KIP1-like) family protein | -0.65 | 0.28 | -0.31 | |||
89 | AT4G29820 | homolog of CFIM-25 | ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25, homolog of CFIM-25 |
-0.63 | 0.31 | -0.33 | ||
90 | AT5G07860 | HXXXD-type acyl-transferase family protein | -0.63 | 0.32 | -0.33 | |||
91 | AT3G44280 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.32 | -0.3 | |||
92 | AT1G70290 | trehalose-6-phosphatase synthase S8 | ATTPS8, ATTPSC, trehalose-6-phosphatase synthase S8 |
-0.63 | 0.28 | -0.29 | ||
93 | AT1G49740 | PLC-like phosphodiesterases superfamily protein | -0.62 | 0.33 | -0.33 | |||
94 | AT5G26980 | syntaxin of plants 41 | ATSYP41, ATTLG2A, syntaxin of plants 41 |
-0.62 | 0.33 | -0.31 | ||
95 | AT5G25900 | GA requiring 3 | ARABIDOPSIS THALIANA ENT-KAURENE OXIDASE 1, CYTOCHROME P450 701 A3, GA requiring 3 |
-0.62 | 0.32 | -0.32 | ||
96 | AT1G28580 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.62 | 0.31 | -0.32 | |||
97 | AT4G37790 | Homeobox-leucine zipper protein family | HAT22 | -0.62 | 0.33 | -0.33 | ||
98 | AT1G60260 | beta glucosidase 5 | beta glucosidase 5 | -0.62 | 0.33 | -0.32 | ||
99 | AT4G14615 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.32 | -0.32 | |||
100 | AT5G47560 | tonoplast dicarboxylate transporter | ATSDAT, TONOPLAST DICARBOXYLATE TRANSPORTER, tonoplast dicarboxylate transporter |
-0.61 | 0.28 | -0.32 | ||
101 | AT2G35795 | Chaperone DnaJ-domain superfamily protein | -0.61 | 0.33 | -0.32 | |||
102 | AT5G65110 | acyl-CoA oxidase 2 | acyl-CoA oxidase 2, ATACX2 | -0.61 | 0.32 | -0.3 | ||
103 | AT3G54480 | SKP1/ASK-interacting protein 5 | SKP1/ASK-interacting protein 5, SKP5 |
-0.61 | 0.29 | -0.32 | ||
104 | AT4G09340 | SPla/RYanodine receptor (SPRY) domain-containing protein | -0.61 | 0.33 | -0.32 |