AT5G18475 : -
Query Information
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AGICode AT5G18475
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 1 0.32 -0.31
2 AT1G35570 transposable element gene 0.75 0.29 -0.31
3 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.74 0.32 -0.31
4 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.73 0.31 -0.32
5 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.73 0.3 -0.33
6 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.72 0.34 -0.33
7 AT1G63730 Disease resistance protein (TIR-NBS-LRR class) family 0.71 0.33 -0.32
8 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.71 0.34 -0.3
9 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 0.71 0.33 -0.32
10 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.71 0.31 -0.31
11 AT3G63180 TIC-like TICKLE, TIC-like 0.7 0.29 -0.29
12 AT4G33210 F-box family protein SLOW MOTION 0.7 0.3 -0.3
13 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.7 0.32 -0.33
14 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 0.7 0.32 -0.32
15 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.29
16 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.7 0.31 -0.32
17 AT5G41330 BTB/POZ domain with WD40/YVTN repeat-like protein 0.69 0.3 -0.31
18 AT5G24740 Protein of unknown function (DUF1162) 0.69 0.31 -0.31
19 AT4G14600 Target SNARE coiled-coil domain protein -0.68 0.32 -0.32
20 AT3G42700 transposable element gene 0.68 0.32 -0.29
21 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.68 0.3 -0.32
22 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.68 0.33 -0.31
23 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.68 0.34 -0.33
24 AT4G34040 RING/U-box superfamily protein 0.68 0.33 -0.3
25 AT3G26560 ATP-dependent RNA helicase, putative 0.67 0.31 -0.31
26 AT1G02020 nitroreductase family protein 0.67 0.32 -0.33
27 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.67 0.3 -0.33
28 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.67 0.3 -0.32
29 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.67 0.3 -0.33
30 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.67 0.33 -0.34
31 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 0.67 0.33 -0.32
32 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.66 0.32 -0.32
33 AT1G02360 Chitinase family protein -0.66 0.31 -0.3
34 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4		 -0.66 0.32 -0.3
35 AT4G25970 phosphatidylserine decarboxylase 3 phosphatidylserine decarboxylase 3 0.66 0.31 -0.31
36 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.65 0.34 -0.32
37 AT3G15980 Coatomer, beta' subunit 0.65 0.29 -0.34
38 ATCG00800 structural constituent of ribosome 0.65 0.31 -0.32
39 AT3G09850 D111/G-patch domain-containing protein 0.65 0.31 -0.29
40 AT2G14570 transposable element gene 0.65 0.32 -0.31
41 AT1G71820 SEC6 SEC6 0.65 0.31 -0.29
42 AT5G18190 Protein kinase family protein 0.64 0.33 -0.32
43 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 0.64 0.34 -0.33
44 AT3G07274 unknown pseudogene 0.64 0.3 -0.32
45 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE 0.64 0.32 -0.3
46 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.64 0.32 -0.32
47 AT5G43310 COP1-interacting protein-related 0.64 0.33 -0.31
48 AT1G17070 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 0.63 0.3 -0.33
49 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.63 0.3 -0.3
50 AT2G07360 SH3 domain-containing protein 0.63 0.32 -0.32
51 AT2G29190 pumilio 2 pumilio 2, pumilio 2 0.63 0.31 -0.31
52 AT5G51840 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.3 -0.3
53 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.33
54 AT1G45160 Protein kinase superfamily protein 0.63 0.33 -0.33
55 AT3G24790 Protein kinase superfamily protein 0.63 0.32 -0.32
56 AT2G45620 Nucleotidyltransferase family protein 0.63 0.32 -0.34
57 AT4G32640 Sec23/Sec24 protein transport family protein 0.62 0.32 -0.33
58 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 0.62 0.32 -0.32
59 AT2G43600 Chitinase family protein -0.62 0.33 -0.3
60 AT5G43340 phosphate transporter 1;6 phosphate transporter 1;6,
PHOSPHATE TRANSPORTER 6		 0.62 0.31 -0.31
61 AT5G20840 Phosphoinositide phosphatase family protein 0.62 0.32 -0.33
62 AT4G36630 Vacuolar sorting protein 39 EMBRYO DEFECTIVE 2754 0.62 0.34 -0.31
63 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 -0.62 0.31 -0.33
64 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.62 0.3 -0.3
65 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.62 0.31 -0.34
66 AT2G33790 arabinogalactan protein 30 arabinogalactan protein 30,
ATAGP30		 -0.62 0.32 -0.32
67 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.62 0.29 -0.32
68 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.62 0.3 -0.32
69 AT4G13960 F-box/RNI-like superfamily protein -0.61 0.33 -0.3
70 AT1G14040 EXS (ERD1/XPR1/SYG1) family protein -0.61 0.31 -0.3
71 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.61 0.29 -0.3
72 AT3G55780 Glycosyl hydrolase superfamily protein 0.61 0.29 -0.34
73 AT5G07050 nodulin MtN21 /EamA-like transporter family protein 0.61 0.32 -0.33
74 AT1G34770 CONTAINS InterPro DOMAIN/s: MAGE protein
(InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins
in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104;
Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76
(source: NCBI BLink).		 -0.61 0.31 -0.3
75 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.61 0.32 -0.33
76 AT1G76860 Small nuclear ribonucleoprotein family protein -0.61 0.33 -0.3
77 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.61 0.3 -0.32
78 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.61 0.3 -0.32
79 AT1G53680 glutathione S-transferase TAU 28 glutathione S-transferase TAU 28,
glutathione S-transferase TAU 28		 -0.6 0.32 -0.31
80 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.6 0.31 -0.29
81 AT4G34215 Domain of unknown function (DUF303) -0.6 0.3 -0.3
82 AT4G34840 Phosphorylase superfamily protein ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 2, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
2, METHYLTHIOADENOSINE
NUCLEOSIDASE 2,
methylthioadenosine nucleosidase 2		 -0.6 0.31 -0.32
83 ATCG01020 ribosomal protein L32 ribosomal protein L32 0.6 0.33 -0.31
84 AT2G33540 C-terminal domain phosphatase-like 3 ATCPL3, C-terminal domain
phosphatase-like 3		 0.6 0.33 -0.32
85 AT5G10430 arabinogalactan protein 4 arabinogalactan protein 4, ATAGP4 -0.6 0.34 -0.31
86 AT2G32415 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.6 0.34 -0.31
87 AT1G21650 Preprotein translocase SecA family protein SECA2 0.6 0.34 -0.33
88 AT3G59910 Ankyrin repeat family protein 0.59 0.34 -0.32
89 AT4G05250 Ubiquitin-like superfamily protein -0.59 0.32 -0.32
90 AT2G01130 DEA(D/H)-box RNA helicase family protein 0.59 0.32 -0.32
91 AT3G12660 FASCICLIN-like arabinogalactan protein 14 precursor FASCICLIN-like arabinogalactan
protein 14 precursor		 0.59 0.28 -0.31
92 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.59 0.31 -0.31
93 AT5G07040 RING/U-box superfamily protein -0.59 0.32 -0.32
94 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.32
95 AT2G25660 embryo defective 2410 embryo defective 2410 0.59 0.32 -0.32
96 AT1G50720 Stigma-specific Stig1 family protein -0.59 0.29 -0.31
97 AT5G40750 FBD / Leucine Rich Repeat domains containing protein 0.59 0.33 -0.29
98 AT5G46190 RNA-binding KH domain-containing protein 0.59 0.33 -0.31
99 AT1G13920 Remorin family protein 0.59 0.33 -0.32
100 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.59 0.32 -0.31
101 ATCG00040 maturase K maturase K 0.59 0.32 -0.31
102 AT4G18593 dual specificity protein phosphatase-related -0.58 0.32 -0.32
103 AT5G40250 RING/U-box superfamily protein -0.58 0.32 -0.3
104 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 -0.58 0.31 -0.32
105 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.58 0.32 -0.31
106 AT5G11540 D-arabinono-1,4-lactone oxidase family protein -0.57 0.3 -0.3
107 AT4G25410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.57 0.32 -0.34
108 AT4G13130 Cysteine/Histidine-rich C1 domain family protein -0.57 0.31 -0.32
109 AT1G54850 HSP20-like chaperones superfamily protein -0.57 0.31 -0.32
110 AT3G48370 transposable element gene -0.57 0.32 -0.33
111 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.57 0.3 -0.29
112 AT3G09700 Chaperone DnaJ-domain superfamily protein -0.57 0.32 -0.33
113 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 -0.57 0.32 -0.32
114 AT2G44180 methionine aminopeptidase 2A methionine aminopeptidase 2A -0.56 0.3 -0.33
115 AT1G33540 serine carboxypeptidase-like 18 serine carboxypeptidase-like 18 -0.56 0.3 -0.3
116 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.56 0.33 -0.31
117 AT2G36410 Family of unknown function (DUF662) -0.56 0.31 -0.32
118 AT4G03610 Metallo-hydrolase/oxidoreductase superfamily protein -0.56 0.3 -0.31
119 AT3G07340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.56 0.32 -0.32
120 AT5G15180 Peroxidase superfamily protein -0.56 0.31 -0.32
121 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.56 0.31 -0.31
122 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.56 0.33 -0.32
123 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 -0.55 0.33 -0.31
124 AT5G62165 AGAMOUS-like 42 AGAMOUS-like 42, FOREVER YOUNG
FLOWER		 -0.55 0.33 -0.31
125 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.55 0.33 -0.31
126 AT4G31320 SAUR-like auxin-responsive protein family -0.55 0.32 -0.32
127 AT4G02810 Protein of unknown function (DUF3049) FANTASTIC FOUR 1 -0.55 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
128 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.72 0.46 -0.47
129 C0089 Fortunellin - - - 0.62 0.46 -0.44