AT5G18180 : -
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AGICode AT5G18180
Description H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 1 0.33 -0.33
2 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12
0.82 0.32 -0.29
3 AT1G50760 Aminotransferase-like, plant mobile domain family protein 0.8 0.32 -0.3
4 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6
-0.77 0.33 -0.31
5 AT2G44260 Plant protein of unknown function (DUF946) -0.75 0.29 -0.3
6 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 -0.75 0.33 -0.32
7 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein
EMBRYO DEFECTIVE 2597, NO VEIN 0.73 0.32 -0.33
8 AT5G65510 AINTEGUMENTA-like 7 AINTEGUMENTA-like 7, PLETHORA 7 0.73 0.33 -0.32
9 AT5G51690 1-amino-cyclopropane-1-carboxylate synthase 12 1-amino-cyclopropane-1-carboxylate
synthase 12
0.73 0.32 -0.31
10 AT2G42060 Cysteine/Histidine-rich C1 domain family protein 0.73 0.31 -0.31
11 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein 0.73 0.32 -0.3
12 AT2G16210 Transcriptional factor B3 family protein 0.73 0.32 -0.32
13 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2
-0.73 0.3 -0.33
14 AT4G29285 low-molecular-weight cysteine-rich 24 low-molecular-weight cysteine-rich
24
0.73 0.34 -0.31
15 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3
0.72 0.32 -0.32
16 AT2G23360 Plant protein of unknown function (DUF869) 0.72 0.31 -0.31
17 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 0.72 0.3 -0.34
18 AT4G33450 myb domain protein 69 MYB DOMAIN PROTEIN 69, myb domain
protein 69
0.72 0.29 -0.33
19 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
0.71 0.29 -0.3
20 AT2G11360 transposable element gene 0.71 0.3 -0.32
21 AT2G05200 transposable element gene 0.71 0.32 -0.33
22 AT2G05000 transposable element gene 0.71 0.33 -0.29
23 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.71 0.31 -0.32
24 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 0.71 0.3 -0.3
25 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family 0.71 0.32 -0.34
26 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 0.71 0.31 -0.31
27 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 0.71 0.32 -0.33
28 AT1G43570 transposable element gene 0.71 0.34 -0.3
29 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.71 0.32 -0.33
30 AT1G65020 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endoplasmic
reticulum, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast
hits to 69 proteins in 27 species: Archae - 0; Bacteria -
18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).
-0.7 0.32 -0.33
31 AT1G74820 RmlC-like cupins superfamily protein 0.7 0.31 -0.31
32 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39
0.7 0.33 -0.28
33 AT1G55410 pseudogene, CHP-rich zinc finger protein, putative, similar
to putative CHP-rich zinc finger protein GB:CAB77744
GI:7268217 from (Arabidopsis thaliana)
0.7 0.31 -0.33
34 AT1G53790 F-box and associated interaction domains-containing protein 0.7 0.32 -0.31
35 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 0.7 0.33 -0.32
36 AT1G30710 FAD-binding Berberine family protein -0.7 0.32 -0.32
37 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED -0.69 0.32 -0.32
38 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
-0.69 0.32 -0.31
39 AT1G17410 Nucleoside diphosphate kinase family protein -0.69 0.31 -0.29
40 AT5G39785 Protein of unknown function (DUF1666) 0.69 0.29 -0.29
41 AT2G43250 unknown protein; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.69 0.32 -0.31
42 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 -0.69 0.33 -0.31
43 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.68 0.31 -0.3
44 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein 0.68 0.34 -0.32
45 AT1G79780 Uncharacterised protein family (UPF0497) 0.68 0.3 -0.33
46 AT5G13670 nodulin MtN21 /EamA-like transporter family protein 0.68 0.32 -0.31
47 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 0.68 0.32 -0.31
48 AT5G20090 Uncharacterised protein family (UPF0041) -0.68 0.32 -0.32
49 AT5G13380 Auxin-responsive GH3 family protein 0.68 0.31 -0.33
50 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 0.68 0.31 -0.33
51 AT5G02740 Ribosomal protein S24e family protein -0.68 0.33 -0.29
52 AT2G21600 endoplasmatic reticulum retrieval protein 1B endoplasmatic reticulum retrieval
protein 1B, endoplasmatic
reticulum retrieval protein 1B
-0.68 0.33 -0.3
53 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.67 0.32 -0.31
54 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).
-0.67 0.31 -0.32
55 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein -0.67 0.32 -0.31
56 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.66 0.31 -0.35
57 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7
-0.66 0.31 -0.34
58 AT5G01860 C2H2 and C2HC zinc fingers superfamily protein 0.66 0.31 -0.34
59 AT5G28590 DNA-binding family protein 0.66 0.3 -0.32
60 AT1G05550 Protein of unknown function (DUF295) 0.66 0.3 -0.29
61 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein
-0.66 0.31 -0.31
62 AT2G16260 pseudogene of glycine-rich RNA-binding protein glycine-rich RNA-binding protein 1 0.65 0.33 -0.31
63 AT2G10760 transposable element gene 0.65 0.31 -0.31
64 AT4G34330 Protein of unknown function (DUF677) 0.65 0.3 -0.31
65 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 0.65 0.32 -0.33
66 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2
-0.65 0.3 -0.29
67 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.65 0.32 -0.34
68 AT3G49162 pseudogene of glycoside hydrolase family 28 protein -0.65 0.31 -0.29
69 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 -0.65 0.33 -0.31
70 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE
-0.65 0.3 -0.31
71 AT1G54110 Membrane fusion protein Use1 -0.65 0.31 -0.32
72 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)
0.65 0.31 -0.31
73 AT1G26300 BSD domain-containing protein -0.65 0.31 -0.3
74 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2
-0.65 0.3 -0.32
75 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.65 0.33 -0.3
76 AT5G50910 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.64 0.33 -0.32
77 AT5G42170 SGNH hydrolase-type esterase superfamily protein 0.64 0.34 -0.33
78 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 -0.64 0.31 -0.32
79 AT2G05810 ARM repeat superfamily protein 0.64 0.32 -0.32
80 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1
0.64 0.33 -0.3
81 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A
-0.64 0.28 -0.3
82 AT1G31760 SWIB/MDM2 domain superfamily protein -0.64 0.3 -0.33
83 AT1G20850 xylem cysteine peptidase 2 xylem cysteine peptidase 2 -0.64 0.31 -0.29
84 AT4G03690 transposable element gene 0.64 0.31 -0.31
85 AT5G59910 Histone superfamily protein HTB4 -0.64 0.34 -0.32
86 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
0.64 0.31 -0.31
87 AT3G31920 transposable element gene 0.64 0.3 -0.31
88 AT4G22650 CONTAINS InterPro DOMAIN/s: Plant lipid transfer
protein/seed storage/trypsin-alpha amylase inhibitor
(InterPro:IPR003612); BEST Arabidopsis thaliana protein
match is: Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein
(TAIR:AT4G22640.1); Has 25 Blast hits to 25 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.64 0.33 -0.34
89 AT1G31030 transposable element gene 0.63 0.33 -0.33
90 AT2G23940 Protein of unknown function (DUF788) -0.63 0.33 -0.31
91 AT3G08890 Protein of unknown function, DUF538 -0.63 0.33 -0.3
92 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 -0.63 0.3 -0.3
93 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B -0.63 0.32 -0.32
94 AT1G75430 BEL1-like homeodomain 11 BEL1-like homeodomain 11 0.63 0.33 -0.31
95 AT3G26870 Plant self-incompatibility protein S1 family 0.63 0.32 -0.32
96 AT4G10260 pfkB-like carbohydrate kinase family protein 0.63 0.33 -0.33
97 AT2G47680 zinc finger (CCCH type) helicase family protein 0.62 0.3 -0.31
98 AT5G27940 WPP domain protein 3 WPP domain protein 3 0.62 0.31 -0.3
99 AT1G30010 Intron maturase, type II family protein 0.62 0.31 -0.3
100 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1
-0.62 0.33 -0.31
101 AT1G47680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast
hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.62 0.32 -0.32
102 AT1G69010 BES1-interacting Myc-like protein 2 BES1-interacting Myc-like protein
2
-0.62 0.33 -0.34
103 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
-0.62 0.33 -0.31
104 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1
0.62 0.31 -0.3
105 AT2G27390 proline-rich family protein 0.62 0.33 -0.32
106 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases
-0.62 0.33 -0.32
107 AT2G24255 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to
121 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.62 0.34 -0.34
108 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD
-0.62 0.29 -0.31
109 AT4G32930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF866, eukaryotic (InterPro:IPR008584);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).
-0.62 0.33 -0.33
110 AT5G38910 RmlC-like cupins superfamily protein 0.62 0.32 -0.3
111 AT4G37780 myb domain protein 87 ATMYB87, myb domain protein 87 -0.62 0.32 -0.32
112 AT3G07440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits
to 37 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).
-0.61 0.32 -0.3
113 AT2G36410 Family of unknown function (DUF662) -0.61 0.31 -0.32
114 AT4G35335 Nucleotide-sugar transporter family protein -0.61 0.31 -0.34
115 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.61 0.31 -0.31
116 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.61 0.34 -0.31
117 AT5G39860 basic helix-loop-helix (bHLH) DNA-binding family protein BASIC HELIX-LOOP-HELIX PROTEIN
136, BANQUO 1, PACLOBUTRAZOL
RESISTANCE1
-0.61 0.32 -0.31
118 AT3G62020 germin-like protein 10 germin-like protein 10 -0.61 0.32 -0.31
119 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein
-0.61 0.32 -0.31
120 AT3G11945 homogentisate prenyltransferase homogentisate prenyltransferase,
homogentisate prenyltransferase,
PHYTOENE DESATURATION 2
-0.6 0.3 -0.32
121 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2
-0.6 0.32 -0.32
122 AT5G51700 protein binding;zinc ion binding ATRAR1, PPHB SUSCEPTIBLE 2,
Required for Mla12 resistance 1,
RPR2
-0.6 0.31 -0.31
123 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 -0.6 0.3 -0.31
124 AT5G28050 Cytidine/deoxycytidylate deaminase family protein -0.6 0.33 -0.31
125 AT4G15200 formin 3 formin 3, formin 3 -0.6 0.31 -0.33
126 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3
-0.6 0.33 -0.3
127 AT5G26210 alfin-like 4 alfin-like 4 -0.59 0.32 -0.3
128 AT2G25720 unknown protein; Has 38 Blast hits to 38 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.59 0.31 -0.32
129 AT5G59050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
-0.59 0.33 -0.32
130 AT1G26820 ribonuclease 3 ribonuclease 3 -0.59 0.31 -0.32
131 AT5G62880 RAC-like 10 RAC-like 10, ARABIDOPSIS THALIANA
RAC-LIKE 10, RHO-RELATED PROTEIN
FROM PLANTS 11, RAC-like 10,
RHO-related protein from plants 11
-0.59 0.32 -0.31
132 AT1G25460 NAD(P)-binding Rossmann-fold superfamily protein -0.59 0.31 -0.31
133 AT5G54750 Transport protein particle (TRAPP) component -0.59 0.33 -0.3
134 AT3G21865 peroxin 22 peroxin 22 -0.58 0.33 -0.3
135 AT5G57400 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.58 0.34 -0.34
136 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.58 0.31 -0.33
137 AT5G51400 PLAC8 family protein -0.58 0.31 -0.32
138 AT5G17070 CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core
regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.58 0.3 -0.32
139 AT5G54855 Pollen Ole e 1 allergen and extensin family protein -0.57 0.29 -0.32
140 AT3G08880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits
to 175 proteins in 60 species: Archae - 4; Bacteria - 33;
Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other
Eukaryotes - 52 (source: NCBI BLink).
-0.57 0.33 -0.31
141 AT1G59670 glutathione S-transferase TAU 15 glutathione S-transferase TAU 15,
glutathione S-transferase TAU 15
-0.57 0.3 -0.31
142 AT1G79990 structural molecules -0.57 0.3 -0.31
143 AT2G26810 Putative methyltransferase family protein -0.57 0.29 -0.32
144 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 -0.57 0.29 -0.3
145 AT3G30846 transposable element gene -0.57 0.29 -0.33