AT5G18170 : glutamate dehydrogenase 1
Query Information
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AGICode AT5G18170
Description glutamate dehydrogenase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 1 0.3 -0.31
2 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 -0.82 0.33 -0.35
3 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 0.78 0.32 -0.29
4 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 -0.77 0.32 -0.33
5 AT2G36630 Sulfite exporter TauE/SafE family protein -0.76 0.31 -0.32
6 AT5G49910 chloroplast heat shock protein 70-2 chloroplast heat shock protein
70-2, HEAT SHOCK PROTEIN 70-7		 -0.76 0.31 -0.31
7 AT3G54090 fructokinase-like 1 fructokinase-like 1 -0.75 0.3 -0.31
8 AT1G06950 translocon at the inner envelope membrane of chloroplasts
110		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE INNER ENVELOPE MEMBRANE OF
CHLOROPLASTS 110, translocon at
the inner envelope membrane of
chloroplasts 110		 -0.75 0.31 -0.31
9 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 -0.75 0.33 -0.32
10 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 -0.75 0.32 -0.3
11 AT2G45270 glycoprotease 1 glycoprotease 1 -0.74 0.3 -0.32
12 AT1G19450 Major facilitator superfamily protein -0.74 0.31 -0.32
13 AT1G10510 RNI-like superfamily protein embryo defective 2004 -0.74 0.31 -0.31
14 AT2G01860 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 975 -0.74 0.35 -0.32
15 AT2G40400 Protein of unknown function (DUF399 and DUF3411) -0.73 0.3 -0.31
16 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 -0.73 0.32 -0.34
17 AT2G15230 lipase 1 lipase 1, lipase 1 0.73 0.32 -0.36
18 AT2G22125 binding cellulose synthase-interactive
protein 1, POM-POM 2		 -0.73 0.32 -0.29
19 AT5G12860 dicarboxylate transporter 1 dicarboxylate transporter 1 -0.72 0.3 -0.32
20 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 -0.72 0.3 -0.32
21 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 -0.72 0.31 -0.32
22 AT3G12080 GTP-binding family protein embryo defective 2738 -0.72 0.31 -0.33
23 AT2G22870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 embryo defective 2001 -0.72 0.31 -0.32
24 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein -0.72 0.33 -0.3
25 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 -0.71 0.32 -0.32
26 AT5G15740 O-fucosyltransferase family protein -0.71 0.32 -0.3
27 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 -0.71 0.35 -0.32
28 AT3G51870 Mitochondrial substrate carrier family protein -0.7 0.31 -0.31
29 AT5G46290 3-ketoacyl-acyl carrier protein synthase I KETOACYL-ACP SYNTHASE 1,
3-ketoacyl-acyl carrier protein
synthase I		 -0.7 0.31 -0.29
30 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 -0.7 0.34 -0.31
31 AT3G22200 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 GAMMA-AMINOBUTYRATE TRANSAMINASE,
HEXENAL RESPONSE1, POLLEN-PISTIL
INCOMPATIBILITY 2		 0.7 0.29 -0.31
32 AT5G11790 N-MYC downregulated-like 2 N-MYC downregulated-like 2 -0.7 0.35 -0.33
33 AT4G09730 RH39 RH39 -0.7 0.31 -0.32
34 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 -0.7 0.31 -0.32
35 AT3G58510 DEA(D/H)-box RNA helicase family protein -0.7 0.32 -0.33
36 AT1G64530 Plant regulator RWP-RK family protein -0.7 0.31 -0.31
37 AT5G55280 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 ARABIDOPSIS THALIANA HOMOLOG OF
BACTERIAL CYTOKINESIS Z-RING
PROTEIN FTSZ 1-1, CHLOROPLAST
FTSZ, homolog of bacterial
cytokinesis Z-ring protein FTSZ
1-1		 -0.7 0.32 -0.31
38 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA -0.69 0.3 -0.3
39 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 -0.69 0.32 -0.32
40 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 -0.69 0.31 -0.31
41 AT3G16630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATKINESIN-13A, KINESIN-13A -0.69 0.35 -0.31
42 AT3G49650 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.32 -0.3
43 AT4G32915 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of translational fidelity; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glu-tRNAGln amidotransferase, C subunit
(InterPro:IPR003837); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.69 0.32 -0.29
44 AT4G34620 small subunit ribosomal protein 16 small subunit ribosomal protein 16 -0.69 0.32 -0.29
45 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.69 0.31 -0.3
46 AT1G74800 Galactosyltransferase family protein -0.69 0.31 -0.31
47 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 -0.69 0.33 -0.32
48 AT1G33810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.69 0.29 -0.32
49 AT1G66520 formyltransferase, putative pigment defective 194 -0.69 0.33 -0.32
50 AT3G25470 bacterial hemolysin-related -0.69 0.32 -0.33
51 AT2G35860 FASCICLIN-like arabinogalactan protein 16 precursor FASCICLIN-like arabinogalactan
protein 16 precursor		 -0.69 0.35 -0.3
52 AT3G48500 Nucleic acid-binding, OB-fold-like protein PIGMENT DEFECTIVE 312, PLASTID
TRANSCRIPTIONALLY ACTIVE 10		 -0.69 0.29 -0.32
53 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein -0.68 0.3 -0.29
54 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.68 0.3 -0.3
55 AT3G07430 YGGT family protein ATYLMG1-1, embryo defective 1990,
YLMG1-1		 -0.68 0.31 -0.29
56 AT4G36390 Methylthiotransferase -0.68 0.3 -0.32
57 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 -0.68 0.29 -0.32
58 AT2G02740 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 3, PLASTID
TRANSCRIPTIONALLY ACTIVE11, WHIRLY
3		 -0.68 0.31 -0.32
59 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.68 0.3 -0.32
60 AT1G13030 sphere organelles protein-related -0.68 0.3 -0.3
61 AT1G48570 zinc finger (Ran-binding) family protein -0.68 0.31 -0.3
62 AT5G64740 cellulose synthase 6 cellulose synthase 6, E112,
ISOXABEN RESISTANT 2, PROCUSTE 1		 -0.68 0.3 -0.31
63 AT1G18440 Peptidyl-tRNA hydrolase family protein -0.68 0.3 -0.32
64 AT5G64960 cyclin dependent kinase group C2 cyclin dependent kinase group C2,
Cyclin-dependent kinase C;2		 -0.67 0.32 -0.29
65 AT3G57610 adenylosuccinate synthase adenylosuccinate synthase -0.67 0.31 -0.33
66 AT5G19820 ARM repeat superfamily protein embryo defective 2734 -0.67 0.32 -0.31
67 AT4G19610 nucleotide binding;nucleic acid binding;RNA binding -0.67 0.3 -0.29
68 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.67 0.31 -0.32
69 AT3G59870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43945.1); Has 292 Blast
hits to 292 proteins in 84 species: Archae - 0; Bacteria -
122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0;
Other Eukaryotes - 124 (source: NCBI BLink).		 -0.67 0.29 -0.33
70 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 -0.67 0.35 -0.31
71 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 -0.67 0.31 -0.3
72 AT4G33760 tRNA synthetase class II (D, K and N) family protein -0.67 0.29 -0.32
73 AT4G25750 ABC-2 type transporter family protein ATP-binding cassette G4 -0.67 0.33 -0.33
74 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 -0.67 0.32 -0.34
75 AT1G06190 Rho termination factor -0.66 0.32 -0.31
76 AT2G17800 Arabidopsis RAC-like 1 Arabidopsis RAC-like 1, ATGP2,
ATRAC1, ATROP3, RHO-RELATED
GTPASES FROM PLANTS 3		 -0.66 0.28 -0.31
77 AT3G08740 elongation factor P (EF-P) family protein -0.66 0.29 -0.34
78 AT3G01060 unknown protein; Has 640 Blast hits to 638 proteins in 201
species: Archae - 0; Bacteria - 293; Metazoa - 0; Fungi -
71; Plants - 72; Viruses - 0; Other Eukaryotes - 204
(source: NCBI BLink).		 -0.66 0.32 -0.33
79 AT3G47520 malate dehydrogenase malate dehydrogenase, plastidic
NAD-dependent malate dehydrogenase		 -0.66 0.31 -0.32
80 AT1G53510 mitogen-activated protein kinase 18 ARABIDOPSIS THALIANA MAP KINASE
18, mitogen-activated protein
kinase 18		 -0.66 0.3 -0.31
81 AT2G03050 Mitochondrial transcription termination factor family
protein		 EMBRYO DEFECTIVE 93, SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 10		 -0.66 0.31 -0.3
82 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein -0.66 0.33 -0.31
83 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.66 0.3 -0.32
84 AT5G13650 elongation factor family protein SUPPRESSOR OF VARIEGATION 3 -0.66 0.32 -0.34
85 AT5G42670 Agenet domain-containing protein -0.66 0.32 -0.31
86 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 0.66 0.34 -0.33
87 AT5G08650 Small GTP-binding protein -0.66 0.32 -0.31
88 AT5G55580 Mitochondrial transcription termination factor family
protein		 -0.66 0.29 -0.32
89 AT5G07370 inositol polyphosphate kinase 2 alpha INOSITOL POLYPHOSPHATE KINASE 2
ALPHA, inositol polyphosphate
kinase 2 alpha		 -0.66 0.32 -0.34
90 AT2G42950 Magnesium transporter CorA-like family protein 0.65 0.3 -0.32
91 AT4G22610 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.29 -0.31
92 AT3G61990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 O-MTase family 3 protein 0.65 0.3 -0.33
93 AT5G18900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.64 0.34 -0.32
94 AT2G43540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 27
Blast hits to 27 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.29
95 AT5G59700 Protein kinase superfamily protein 0.63 0.33 -0.32
96 AT5G53990 UDP-Glycosyltransferase superfamily protein 0.63 0.32 -0.31
97 AT1G12200 Flavin-binding monooxygenase family protein flavin monooxygenase 0.62 0.33 -0.32
98 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.32 -0.31
99 AT1G54990 alpha/beta-Hydrolases superfamily protein AUXIN RESISTANT 4, REDUCED ROOT
GRAVITROPISM, REDUCED ROOT
GRAVITROPISM 1		 0.61 0.32 -0.33
100 AT4G38740 rotamase CYP 1 rotamase CYP 1 0.61 0.31 -0.31
101 AT5G65660 hydroxyproline-rich glycoprotein family protein 0.6 0.31 -0.32
102 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 0.6 0.31 -0.32
103 AT1G80440 Galactose oxidase/kelch repeat superfamily protein 0.6 0.32 -0.3
104 AT2G43580 Chitinase family protein 0.59 0.32 -0.32
105 AT5G02100 Oxysterol-binding family protein OSBP(OXYSTEROL BINDING
PROTEIN)-RELATED PROTEIN 3A,
UNFERTILIZED EMBRYO SAC 18		 0.59 0.3 -0.32
106 AT2G43570 chitinase, putative chitinase, putative 0.59 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II 0.69 0.43 -0.48 C0146
108 C0045 7-Methylthio-n-heptylglucosinolate - 7-Methylthioheptyl glucosinolate glucosinolate biosynthesis from pentahomomethionine -0.69 0.3 -0.32 C0045
109 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine -0.68 0.46 -0.47 C0031
110 C0143 Maltitol - - starch degradation II 0.63 0.47 -0.43