AT5G17790 : VARIEGATED 3
Query Information
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AGICode AT5G17790
Description zinc finger (Ran-binding) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G17790 zinc finger (Ran-binding) family protein VARIEGATED 3 1 0.3 -0.29
2 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 0.8 0.32 -0.32
3 AT1G80640 Protein kinase superfamily protein 0.79 0.3 -0.33
4 AT3G53700 Pentatricopeptide repeat (PPR) superfamily protein maternal effect embryo arrest 40 0.78 0.3 -0.32
5 AT5G28500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in
49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.77 0.32 -0.32
6 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 0.76 0.33 -0.32
7 AT5G40830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.75 0.33 -0.3
8 AT1G65060 4-coumarate:CoA ligase 3 4-coumarate:CoA ligase 3 0.75 0.31 -0.3
9 AT5G24300 Glycogen/starch synthases, ADP-glucose type STARCH SYNTHASE 1, starch synthase
1		 0.75 0.32 -0.32
10 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.75 0.31 -0.34
11 AT1G62640 3-ketoacyl-acyl carrier protein synthase III 3-ketoacyl-acyl carrier protein
synthase III		 0.73 0.31 -0.3
12 AT4G02790 GTP-binding family protein EMBRYO DEFECTIVE 3129 0.72 0.33 -0.34
13 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 0.71 0.31 -0.34
14 AT1G51720 Amino acid dehydrogenase family protein 0.7 0.31 -0.32
15 AT5G27620 cyclin H;1 cyclin H;1 0.7 0.3 -0.32
16 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 0.69 0.3 -0.35
17 AT5G60780 nitrate transporter 2.3 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 2.3, nitrate
transporter 2.3		 0.69 0.32 -0.31
18 AT2G40110 Yippee family putative zinc-binding protein -0.68 0.32 -0.31
19 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.68 0.32 -0.32
20 AT5G05170 Cellulose synthase family protein ATCESA3, ATH-B, CELLULOSE SYNTHASE
3, CONSTITUTIVE EXPRESSION OF VSP
1, ISOXABEN RESISTANT 1		 0.68 0.3 -0.31
21 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.31 -0.31
22 AT1G62085 Mitochondrial transcription termination factor family
protein		 0.67 0.32 -0.31
23 AT3G48810 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.32 -0.33
24 AT1G51805 Leucine-rich repeat protein kinase family protein 0.66 0.3 -0.32
25 AT1G57770 FAD/NAD(P)-binding oxidoreductase family protein 0.66 0.32 -0.32
26 AT4G11360 RING-H2 finger A1B RING-H2 finger A1B -0.66 0.3 -0.31
27 AT1G79070 SNARE-associated protein-related 0.66 0.32 -0.34
28 AT1G32700 PLATZ transcription factor family protein -0.64 0.32 -0.3
29 AT3G60640 Ubiquitin-like superfamily protein AUTOPHAGY 8G -0.63 0.31 -0.33
30 AT1G20160 Subtilisin-like serine endopeptidase family protein ATSBT5.2 -0.61 0.32 -0.32
31 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 -0.59 0.34 -0.29
32 AT3G03470 cytochrome P450, family 87, subfamily A, polypeptide 9 cytochrome P450, family 87,
subfamily A, polypeptide 9		 -0.58 0.32 -0.3
33 AT3G12120 fatty acid desaturase 2 fatty acid desaturase 2 -0.57 0.3 -0.31
34 AT5G14390 alpha/beta-Hydrolases superfamily protein -0.56 0.3 -0.31
35 AT2G14100 cytochrome P450, family 705, subfamily A, polypeptide 13 cytochrome P450, family 705,
subfamily A, polypeptide 13		 -0.56 0.32 -0.31
36 AT3G61060 phloem protein 2-A13 phloem protein 2-A13, phloem
protein 2-A13		 -0.56 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
37 C0183 MST_3033.1 - - - 0.78 0.46 -0.45