AT5G17960 : -
Query Information
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AGICode AT5G17960
Description Cysteine/Histidine-rich C1 domain family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G17960 Cysteine/Histidine-rich C1 domain family protein 1 0.32 -0.28
2 AT2G15310 ADP-ribosylation factor B1A ADP-ribosylation factor B1A,
ADP-ribosylation factor B1A		 -0.75 0.32 -0.32
3 AT4G14390 Ankyrin repeat family protein 0.71 0.32 -0.29
4 AT2G27140 HSP20-like chaperones superfamily protein -0.71 0.33 -0.31
5 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4		 0.71 0.32 -0.3
6 AT2G19200 unknown protein 0.69 0.32 -0.32
7 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.69 0.32 -0.32
8 AT2G28250 Protein kinase superfamily protein NCRK 0.68 0.31 -0.33
9 AT4G11980 nudix hydrolase homolog 14 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 14, nudix
hydrolase homolog 14, nudix
hydrolase homolog 14		 -0.68 0.32 -0.29
10 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 -0.68 0.32 -0.31
11 AT4G39540 shikimate kinase 2 ATSK2, shikimate kinase 2 -0.68 0.33 -0.31
12 AT3G53940 Mitochondrial substrate carrier family protein 0.68 0.33 -0.3
13 AT5G41350 RING/U-box superfamily protein -0.68 0.31 -0.31
14 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 0.68 0.32 -0.32
15 AT2G27750 Surfeit locus protein 6 0.68 0.29 -0.3
16 AT3G02520 general regulatory factor 7 GF14 NU, general regulatory factor
7		 -0.68 0.32 -0.32
17 AT4G22130 STRUBBELIG-receptor family 8 STRUBBELIG-receptor family 8 0.68 0.33 -0.33
18 AT1G49970 CLP protease proteolytic subunit 1 CLP protease proteolytic subunit
1, NUCLEAR CLPP 5, SUPPRESSOR OF
VARIEGATION 2		 -0.68 0.31 -0.33
19 AT2G10950 BSD domain-containing protein -0.67 0.33 -0.32
20 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B -0.66 0.31 -0.3
21 AT4G29160 SNF7 family protein SNF7.1 -0.66 0.31 -0.3
22 AT4G31470 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.66 0.34 -0.33
23 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.35 -0.31
24 AT5G46730 glycine-rich protein -0.66 0.32 -0.33
25 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.31 -0.32
26 AT1G63480 AT hook motif DNA-binding family protein 0.66 0.32 -0.32
27 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 -0.66 0.32 -0.32
28 AT3G22260 Cysteine proteinases superfamily protein -0.66 0.33 -0.33
29 AT1G16940 F-box/RNI-like/FBD-like domains-containing protein 0.65 0.31 -0.33
30 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.3 -0.32
31 AT2G12320 transposable element gene 0.65 0.31 -0.33
32 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 -0.65 0.32 -0.29
33 AT2G35160 SU(VAR)3-9 homolog 5 SET DOMAIN-CONTAINING PROTEIN 9,
SU(VAR)3-9 homolog 5		 0.65 0.32 -0.34
34 AT1G29040 unknown protein; LOCATED IN: chloroplast, vacuole;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Conserved
hypothetical protein CHP02058 (InterPro:IPR011719); Has 344
Blast hits to 344 proteins in 122 species: Archae - 2;
Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32;
Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).		 -0.65 0.33 -0.29
35 AT4G29560 CONTAINS InterPro DOMAIN/s: Fanconi Anaemia group E
protein, C-terminal (InterPro:IPR021025); Has 41 Blast hits
to 41 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 27; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.65 0.31 -0.3
36 AT4G00280 BEST Arabidopsis thaliana protein match is: Leucine-rich
repeat transmembrane protein kinase protein
(TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.34 -0.31
37 AT5G09230 sirtuin 2 SIRTUIN 2, sirtuin 2 -0.65 0.32 -0.32
38 AT1G49030 PLAC8 family protein 0.65 0.31 -0.32
39 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 0.64 0.32 -0.31
40 AT2G04730 pseudogene, F-box protein-related, contains TIGRFAM
TIGR01640 : F-box protein interaction domain; similar to
F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana)		 0.64 0.32 -0.3
41 AT1G61610 S-locus lectin protein kinase family protein -0.64 0.33 -0.29
42 AT3G44600 cyclophilin71 AtCYP71, cyclophilin 71 0.64 0.31 -0.3
43 AT2G30120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits
to 241 proteins in 42 species: Archae - 4; Bacteria - 15;
Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink).		 -0.64 0.3 -0.31
44 AT3G53550 FBD-like domain family protein 0.64 0.34 -0.31
45 AT5G27680 RECQ helicase SIM RECQ helicase SIM 0.64 0.34 -0.31
46 AT5G49870 Mannose-binding lectin superfamily protein 0.64 0.32 -0.33
47 AT2G25010 Aminotransferase-like, plant mobile domain family protein -0.64 0.31 -0.3
48 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.64 0.32 -0.31
49 AT2G20710 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.32 -0.32
50 AT5G67180 target of early activation tagged (EAT) 3 target of early activation tagged
(EAT) 3		 -0.64 0.33 -0.29
51 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases -0.63 0.33 -0.33
52 AT5G07270 XB3 ortholog 3 in Arabidopsis thaliana XB3 ortholog 3 in Arabidopsis
thaliana		 -0.63 0.32 -0.33
53 AT1G42960 expressed protein localized to the inner membrane of the
chloroplast.		 -0.63 0.29 -0.34
54 AT2G04500 Cysteine/Histidine-rich C1 domain family protein 0.63 0.33 -0.32
55 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 -0.63 0.3 -0.31
56 AT5G54940 Translation initiation factor SUI1 family protein -0.63 0.3 -0.31
57 AT5G08139 RING/U-box superfamily protein -0.63 0.3 -0.35
58 AT5G27220 Frigida-like protein 0.63 0.3 -0.32
59 AT2G20350 Integrase-type DNA-binding superfamily protein -0.63 0.29 -0.34
60 AT3G14370 Protein kinase superfamily protein WAG2 0.62 0.3 -0.29
61 AT3G19160 ATP/ADP isopentenyltransferases ATP/ADP isopentenyltransferases,
ATP/ADP isopentenyltransferases,
isopentenyltransferase 8, PGA22		 -0.62 0.32 -0.31
62 AT1G18910 zinc ion binding;zinc ion binding 0.62 0.31 -0.33
63 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 -0.62 0.3 -0.34
64 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.62 0.33 -0.3
65 AT1G62280 SLAC1 homologue 1 SLAC1 homologue 1 0.62 0.3 -0.31
66 AT5G22950 SNF7 family protein VPS24.1 -0.62 0.34 -0.31
67 AT5G51670 Protein of unknown function (DUF668) 0.61 0.32 -0.32
68 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.31 -0.31
69 AT3G17110 pseudogene, glycine-rich protein -0.61 0.3 -0.33
70 AT1G25580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 8, SUPPRESSOR OF GAMMA
RADIATION 1		 0.61 0.32 -0.3
71 AT5G53070 Ribosomal protein L9/RNase H1 0.61 0.31 -0.3
72 AT5G14420 RING domain ligase2 RING domain ligase2 -0.61 0.3 -0.31
73 AT5G23660 homolog of Medicago truncatula MTN3 AtSWEET12, homolog of Medicago
truncatula MTN3, SWEET12		 -0.61 0.31 -0.31
74 AT5G40550 SGF29 tudor-like domain AtSGF29b, SaGa associated Factor
29 b		 -0.61 0.3 -0.32
75 AT1G39430 transposable element gene 0.61 0.34 -0.31
76 AT5G49550 Putative homolog of mammalian BLOC-1 Subunit 2. Protein -
protein interaction with BLOS1.		 BLOC subunit 2 -0.61 0.31 -0.32
77 AT5G08550 GC-rich sequence DNA-binding factor-like protein increased level of polyploidy1-1D 0.61 0.33 -0.31
78 AT5G17530 phosphoglucosamine mutase family protein -0.61 0.31 -0.32
79 AT3G46710 NB-ARC domain-containing disease resistance protein 0.61 0.33 -0.29
80 AT5G06830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF773 (InterPro:IPR008491); Has 365 Blast
hits to 359 proteins in 109 species: Archae - 9; Bacteria -
13; Metazoa - 209; Fungi - 7; Plants - 47; Viruses - 0;
Other Eukaryotes - 80 (source: NCBI BLink).		 -0.61 0.3 -0.32
81 AT5G28700 transposable element gene 0.61 0.31 -0.34
82 AT3G42800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54200.1); Has 853 Blast hits
to 340 proteins in 98 species: Archae - 0; Bacteria - 94;
Metazoa - 145; Fungi - 62; Plants - 95; Viruses - 0; Other
Eukaryotes - 457 (source: NCBI BLink).		 0.6 0.33 -0.33
83 AT3G44510 alpha/beta-Hydrolases superfamily protein 0.6 0.31 -0.31
84 AT4G03330 syntaxin of plants 123 ATSYP123, syntaxin of plants 123 0.6 0.31 -0.33
85 AT2G29220 Concanavalin A-like lectin protein kinase family protein 0.6 0.31 -0.32
86 AT5G08090 unknown protein; Has 13 Blast hits to 13 proteins in 8
species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.3 -0.32
87 AT4G25040 Uncharacterised protein family (UPF0497) 0.59 0.31 -0.31
88 AT1G03620 ELMO/CED-12 family protein 0.59 0.32 -0.31
89 AT1G19900 glyoxal oxidase-related protein 0.59 0.31 -0.32
90 AT4G11450 Protein of unknown function (DUF3527) 0.58 0.33 -0.31
91 AT1G10300 Nucleolar GTP-binding protein 0.58 0.31 -0.34
92 AT1G07560 Leucine-rich repeat protein kinase family protein 0.58 0.3 -0.34
93 AT2G05870 transposable element gene 0.58 0.3 -0.34
94 AT2G28260 cyclic nucleotide-gated channel 15 cyclic nucleotide-gated channel
15, cyclic nucleotide-gated
channel 15		 0.58 0.32 -0.33
95 AT3G61160 Protein kinase superfamily protein 0.58 0.3 -0.3
96 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 0.58 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.73 0.43 -0.43 C0018