AT5G17230 : PHYTOENE SYNTHASE
Query Information
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AGICode AT5G17230
Description PHYTOENE SYNTHASE
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G17230 PHYTOENE SYNTHASE PHYTOENE SYNTHASE 1 0.31 -0.3
2 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.89 0.32 -0.32
3 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 0.89 0.3 -0.3
4 AT4G10300 RmlC-like cupins superfamily protein 0.89 0.31 -0.33
5 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.88 0.34 -0.31
6 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.87 0.3 -0.31
7 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.87 0.33 -0.33
8 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.87 0.32 -0.29
9 AT2G32765 small ubiquitinrelated modifier 5 ATSUMO5, SUMO 5, small
ubiquitinrelated modifier 5		 0.86 0.32 -0.31
10 AT1G23360 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 MENG 0.86 0.3 -0.33
11 AT1G44000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits
to 212 proteins in 76 species: Archae - 0; Bacteria - 96;
Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.86 0.31 -0.31
12 AT1G60550 enoyl-CoA hydratase/isomerase D DHNS, enoyl-CoA
hydratase/isomerase D		 0.85 0.31 -0.3
13 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.85 0.33 -0.31
14 AT3G12780 phosphoglycerate kinase 1 phosphoglycerate kinase 1 0.85 0.31 -0.31
15 AT2G29360 NAD(P)-binding Rossmann-fold superfamily protein 0.85 0.33 -0.32
16 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR
region		 protein containing PDZ domain, a
K-box domain, and a TPR region		 0.85 0.31 -0.34
17 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.85 0.31 -0.31
18 AT5G44520 NagB/RpiA/CoA transferase-like superfamily protein 0.84 0.31 -0.33
19 AT3G17040 high chlorophyll fluorescent 107 high chlorophyll fluorescent 107 0.84 0.31 -0.31
20 AT4G12970 stomagen EPFL9, STOMAGEN 0.84 0.32 -0.32
21 AT2G41720 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2654 0.83 0.32 -0.3
22 AT3G58140 phenylalanyl-tRNA synthetase class IIc family protein 0.83 0.32 -0.3
23 AT1G24020 MLP-like protein 423 MLP-like protein 423 0.83 0.34 -0.32
24 AT1G43670 Inositol monophosphatase family protein Arabidopsis thaliana cytosolic
fructose-1,6-bisphosphatase,
fructose-1,6-bisphosphatase,
FRUCTOSE INSENSITIVE 1		 0.83 0.31 -0.31
25 AT1G30520 acyl-activating enzyme 14 acyl-activating enzyme 14 0.83 0.32 -0.3
26 AT5G47840 adenosine monophosphate kinase adenosine monophosphate kinase 0.83 0.33 -0.31
27 AT1G21350 Thioredoxin superfamily protein 0.82 0.31 -0.33
28 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.82 0.32 -0.31
29 AT5G16710 dehydroascorbate reductase 1 dehydroascorbate reductase 1 0.82 0.31 -0.31
30 AT2G15820 endonucleases ORGANELLE TRANSCRIPT PROCESSING 51 0.82 0.32 -0.32
31 AT1G68780 RNI-like superfamily protein 0.82 0.35 -0.3
32 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.82 0.32 -0.34
33 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 0.82 0.33 -0.32
34 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.82 0.31 -0.3
35 AT4G38950 ATP binding microtubule motor family protein 0.82 0.34 -0.3
36 AT4G12800 photosystem I subunit l photosystem I subunit l 0.82 0.31 -0.34
37 AT1G32080 membrane protein, putative AtLrgB, LrgB 0.82 0.3 -0.29
38 AT1G32160 Protein of unknown function (DUF760) 0.81 0.32 -0.32
39 AT4G24700 unknown protein; Has 20 Blast hits to 20 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.81 0.3 -0.31
40 AT1G60000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.81 0.31 -0.32
41 AT1G79040 photosystem II subunit R photosystem II subunit R 0.81 0.3 -0.33
42 AT4G09900 methyl esterase 12 ARABIDOPSIS THALIANA METHYL
ESTERASE 12, methyl esterase 12		 0.81 0.31 -0.33
43 AT4G33000 calcineurin B-like protein 10 ATCBL10, calcineurin B-like
protein 10, SOS3-LIKE CALCIUM
BINDING PROTEIN 8		 0.81 0.32 -0.33
44 AT2G38330 MATE efflux family protein 0.8 0.32 -0.32
45 AT2G47400 CP12 domain-containing protein 1 CP12 DOMAIN-CONTAINING PROTEIN 1,
CP12 domain-containing protein 1		 0.8 0.34 -0.32
46 AT2G05620 proton gradient regulation 5 proton gradient regulation 5 0.8 0.32 -0.3
47 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.8 0.33 -0.32
48 AT3G44020 thylakoid lumenal P17.1 protein 0.8 0.31 -0.32
49 AT1G56190 Phosphoglycerate kinase family protein 0.8 0.32 -0.3
50 AT1G23400 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ARABIDOPSIS THALIANA HOMOLOG OF
MAIZE CAF2, CAF2		 0.8 0.33 -0.32
51 AT1G23740 Oxidoreductase, zinc-binding dehydrogenase family protein alkenal/one oxidoreductase 0.8 0.32 -0.3
52 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 -0.78 0.3 -0.31
53 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 -0.74 0.31 -0.3
54 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.72 0.32 -0.31
55 AT5G20830 sucrose synthase 1 ASUS1, atsus1, sucrose synthase 1 -0.71 0.3 -0.33
56 AT3G26440 Protein of unknown function (DUF707) -0.71 0.32 -0.32
57 AT5G38030 MATE efflux family protein -0.69 0.32 -0.33
58 AT5G03240 polyubiquitin 3 polyubiquitin 3 -0.69 0.33 -0.32
59 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 -0.69 0.3 -0.32
60 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 -0.68 0.33 -0.28
61 AT3G57010 Calcium-dependent phosphotriesterase superfamily protein -0.67 0.32 -0.32
62 AT1G09770 cell division cycle 5 ARABIDOPSIS THALIANA CELL DIVISION
CYCLE 5, ARABIDOPSIS THALIANA MYB
DOMAIN CELL DIVISION CYCLE 5, cell
division cycle 5		 -0.67 0.32 -0.33
63 AT5G10540 Zincin-like metalloproteases family protein -0.66 0.31 -0.32
64 AT3G22600 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.34 -0.32
65 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 -0.65 0.32 -0.31
66 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 -0.64 0.32 -0.32
67 AT4G28410 Tyrosine transaminase family protein -0.64 0.31 -0.34
68 AT3G50970 dehydrin family protein LOW TEMPERATURE-INDUCED 30, XERO2 -0.64 0.3 -0.31
69 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.64 0.3 -0.31
70 AT5G66700 homeobox 53 ARABIDOPSIS THALIANA HOMEOBOX 53,
HOMEOBOX-8, homeobox 53		 -0.63 0.34 -0.28
71 AT5G01870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.32 -0.31
72 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.63 0.31 -0.32
73 AT3G13380 BRI1-like 3 BRI1-like 3 -0.63 0.32 -0.32
74 AT4G37940 AGAMOUS-like 21 AGAMOUS-like 21 -0.63 0.31 -0.32
75 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 -0.63 0.32 -0.31
76 AT2G25520 Drug/metabolite transporter superfamily protein -0.63 0.3 -0.32
77 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 -0.63 0.3 -0.29
78 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 -0.63 0.31 -0.33
79 AT2G28790 Pathogenesis-related thaumatin superfamily protein -0.62 0.32 -0.31
80 AT2G46920 Protein phosphatase 2C family protein poltergeist -0.62 0.32 -0.33
81 AT5G23220 nicotinamidase 3 nicotinamidase 3 -0.62 0.32 -0.32
82 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.62 0.34 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.91 0.46 -0.49 C0133
84 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.87 0.48 -0.52 C0241