AT5G14250 : CONSTITUTIVE PHOTOMORPHOGENIC 13
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G14250
Description Proteasome component (PCI) domain protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 1 0.33 -0.28
2 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.84 0.31 -0.33
3 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.84 0.3 -0.32
4 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.83 0.34 -0.33
5 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 0.83 0.31 -0.29
6 AT2G46230 PIN domain-like family protein 0.81 0.3 -0.34
7 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.81 0.33 -0.33
8 AT3G04830 Protein prenylyltransferase superfamily protein 0.78 0.32 -0.33
9 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.78 0.32 -0.31
10 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.78 0.32 -0.32
11 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.78 0.32 -0.3
12 AT2G30050 transducin family protein / WD-40 repeat family protein 0.77 0.34 -0.31
13 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 0.77 0.29 -0.32
14 AT4G26210 Mitochondrial ATP synthase subunit G protein 0.77 0.3 -0.3
15 AT1G77750 Ribosomal protein S13/S18 family 0.77 0.32 -0.32
16 AT1G22270 Trm112p-like protein 0.77 0.28 -0.3
17 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.76 0.34 -0.33
18 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 0.76 0.3 -0.3
19 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.31 -0.31
20 AT5G63400 adenylate kinase 1 adenylate kinase 1 0.76 0.29 -0.32
21 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.76 0.32 -0.33
22 AT5G58030 Transport protein particle (TRAPP) component 0.76 0.32 -0.29
23 AT5G64650 Ribosomal protein L17 family protein 0.75 0.31 -0.33
24 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.75 0.31 -0.33
25 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.75 0.31 -0.32
26 AT1G03150 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.75 0.31 -0.33
27 AT3G47980 Integral membrane HPP family protein 0.75 0.3 -0.3
28 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 0.74 0.34 -0.32
29 AT5G65430 general regulatory factor 8 14-3-3 PROTEIN G-BOX FACTOR14
KAPPA, GF14 KAPPA, general
regulatory factor 8		 0.74 0.34 -0.33
30 AT1G70350 unknown protein; Has 98 Blast hits to 98 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.32 -0.31
31 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 0.74 0.32 -0.33
32 AT5G19760 Mitochondrial substrate carrier family protein 0.74 0.31 -0.32
33 AT5G14790 ARM repeat superfamily protein 0.74 0.33 -0.31
34 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.74 0.3 -0.34
35 AT4G16143 importin alpha isoform 2 importin alpha isoform 2 0.74 0.3 -0.31
36 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 0.74 0.3 -0.31
37 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.74 0.31 -0.33
38 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 0.73 0.29 -0.34
39 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.73 0.31 -0.3
40 AT5G67220 FMN-linked oxidoreductases superfamily protein 0.73 0.32 -0.33
41 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 0.73 0.29 -0.31
42 AT1G23320 tryptophan aminotransferase related 1 tryptophan aminotransferase
related 1		 0.73 0.31 -0.32
43 AT2G46170 Reticulon family protein 0.73 0.28 -0.3
44 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.73 0.32 -0.32
45 AT5G52280 Myosin heavy chain-related protein -0.73 0.32 -0.3
46 AT3G48140 B12D protein 0.73 0.33 -0.34
47 AT1G07210 Ribosomal protein S18 0.73 0.32 -0.31
48 AT3G14600 Ribosomal protein L18ae/LX family protein 0.72 0.33 -0.33
49 AT5G58160 actin binding -0.72 0.32 -0.31
50 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.72 0.3 -0.33
51 AT3G18940 clast3-related 0.72 0.31 -0.3
52 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.72 0.31 -0.31
53 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.72 0.32 -0.3
54 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 0.72 0.31 -0.31
55 AT5G56280 COP9 signalosome subunit 6A COP9 signalosome subunit 6A 0.72 0.32 -0.31
56 AT5G17770 NADH:cytochrome B5 reductase 1 NADH:cytochrome B5 reductase 1,
NADH:cytochrome B5 reductase 1,
NADH:CYTOCHROME B5 REDUCTASE 1		 0.72 0.32 -0.3
57 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.72 0.31 -0.32
58 AT1G71840 transducin family protein / WD-40 repeat family protein 0.71 0.32 -0.33
59 AT1G63000 nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose
synthase/epimerase-reductase,
UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E
PIMERASE-4-REDUCTASE 1		 0.71 0.31 -0.32
60 AT4G29430 ribosomal protein S15A E ribosomal protein S15A E 0.71 0.33 -0.35
61 AT5G27820 Ribosomal L18p/L5e family protein 0.71 0.32 -0.31
62 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 0.71 0.32 -0.31
63 AT4G36420 Ribosomal protein L12 family protein 0.71 0.33 -0.31
64 AT2G21160 Translocon-associated protein (TRAP), alpha subunit 0.71 0.3 -0.33
65 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 0.71 0.3 -0.33
66 AT3G28200 Peroxidase superfamily protein 0.71 0.33 -0.34
67 AT1G02360 Chitinase family protein 0.71 0.31 -0.29
68 AT5G44450 methyltransferases 0.71 0.3 -0.33
69 AT3G19760 eukaryotic initiation factor 4A-III eukaryotic initiation factor
4A-III		 0.71 0.31 -0.33
70 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 0.71 0.33 -0.32
71 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.71 0.31 -0.31
72 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.71 0.3 -0.33
73 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.71 0.3 -0.31
74 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.31 -0.31
75 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.7 0.32 -0.31
76 AT5G62490 HVA22 homologue B ARABIDOPSIS THALIANA HVA22
HOMOLOGUE B, HVA22 homologue B		 -0.69 0.32 -0.34
77 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.69 0.31 -0.33
78 AT5G51350 Leucine-rich repeat transmembrane protein kinase family
protein		 MORE LATERAL GROWTH1 -0.68 0.3 -0.32
79 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.68 0.32 -0.31
80 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1		 -0.67 0.3 -0.34
81 AT4G32620 Enhancer of polycomb-like transcription factor protein -0.67 0.32 -0.3
82 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.67 0.33 -0.32
83 AT2G20460 transposable element gene -0.67 0.31 -0.31
84 AT1G16030 heat shock protein 70B heat shock protein 70B -0.67 0.31 -0.3
85 AT1G72650 TRF-like 6 TRF-like 6 -0.67 0.3 -0.33
86 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.66 0.3 -0.3
87 AT4G12020 protein kinase family protein ATWRKY19, MITOGEN-ACTIVATED
PROTEIN KINASE KINASE KINASE 11,
MAPK/ERK KINASE KINASE 4, WRKY19		 -0.66 0.3 -0.31
88 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.65 0.3 -0.32
89 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 -0.65 0.32 -0.29
90 AT1G33070 MADS-box family protein -0.65 0.3 -0.33
91 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.65 0.3 -0.33
92 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.64 0.3 -0.32
93 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.64 0.34 -0.3
94 AT2G17975 zinc finger (Ran-binding) family protein -0.64 0.32 -0.31
95 AT3G43220 Phosphoinositide phosphatase family protein -0.63 0.32 -0.32
96 AT3G42460 transposable element gene -0.63 0.32 -0.32
97 AT5G53710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.31 -0.34
98 AT5G20840 Phosphoinositide phosphatase family protein -0.63 0.31 -0.34
99 AT1G53100 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.63 0.31 -0.31
100 AT4G34040 RING/U-box superfamily protein -0.63 0.33 -0.3
101 AT1G48090 calcium-dependent lipid-binding family protein -0.63 0.32 -0.32
102 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.62 0.32 -0.31
103 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 -0.62 0.3 -0.32
104 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.62 0.32 -0.3
105 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 -0.62 0.34 -0.32
106 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 -0.62 0.3 -0.3
107 AT1G06490 glucan synthase-like 7 Arabidopsis thaliana glucan
synthase-like 7, atgsl7, callose
synthase 7, gsl07, glucan
synthase-like 7, glucan
synthase-like 7		 -0.61 0.32 -0.3
108 AT1G63280 Serine protease inhibitor (SERPIN) family protein -0.61 0.32 -0.32
109 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B -0.61 0.32 -0.33
110 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.61 0.31 -0.32
111 ATCG00760 ribosomal protein L36 ribosomal protein L36 -0.61 0.31 -0.32
112 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 -0.61 0.33 -0.29
113 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.6 0.35 -0.34
114 AT5G66300 NAC domain containing protein 105 Arabidopsis NAC domain containing
protein 105, NAC domain containing
protein 105, VASCULAR-RELATED
NAC-DOMAIN 3		 -0.6 0.29 -0.31
115 AT2G46180 golgin candidate 4 golgin candidate 4 -0.6 0.31 -0.33
116 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.6 0.32 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.66 0.43 -0.42 C0234