AGICode | AT5G13960 |
Description | SU(VAR)3-9 homolog 4 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G13960 | SU(VAR)3-9 homolog 4 | KRYPTONITE, SET DOMAIN PROTEIN 33, SU(VAR)3-9 homolog 4 |
1 | 0.33 | -0.32 | ||
2 | AT3G02790 | zinc finger (C2H2 type) family protein | 0.75 | 0.31 | -0.3 | |||
3 | AT4G03410 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | -0.7 | 0.3 | -0.31 | |||
4 | AT3G16650 | Transducin/WD40 repeat-like superfamily protein | 0.69 | 0.32 | -0.34 | |||
5 | AT3G50070 | CYCLIN D3;3 | CYCLIN D3;3 | 0.69 | 0.35 | -0.29 | ||
6 | AT5G55140 | ribosomal protein L30 family protein | 0.69 | 0.3 | -0.33 | |||
7 | AT3G51250 | Senescence/dehydration-associated protein-related | -0.68 | 0.32 | -0.31 | |||
8 | AT1G34260 | FORMS APLOID AND BINUCLEATE CELLS 1A | FORMS APLOID AND BINUCLEATE CELLS 1A |
-0.68 | 0.33 | -0.33 | ||
9 | AT1G64580 | Pentatricopeptide repeat (PPR) superfamily protein | 0.68 | 0.31 | -0.31 | |||
10 | AT5G14610 | DEAD box RNA helicase family protein | 0.67 | 0.3 | -0.33 | |||
11 | AT2G24860 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | -0.67 | 0.3 | -0.3 | |||
12 | AT5G65880 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.67 | 0.32 | -0.31 | |||
13 | AT2G43850 | Integrin-linked protein kinase family | -0.66 | 0.31 | -0.36 | |||
14 | AT1G04590 | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.66 | 0.3 | -0.33 | |||
15 | AT5G66750 | chromatin remodeling 1 | ATDDM1, CHA1, CHROMATIN REMODELING 1, chromatin remodeling 1, DECREASED DNA METHYLATION 1, SOMNIFEROUS 1, SOM4 |
0.65 | 0.32 | -0.32 | ||
16 | AT5G13640 | phospholipid:diacylglycerol acyltransferase | ARABIDOPSIS THALIANA PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE, phospholipid:diacylglycerol acyltransferase, PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 |
-0.65 | 0.3 | -0.32 | ||
17 | AT3G59480 | pfkB-like carbohydrate kinase family protein | 0.65 | 0.3 | -0.34 | |||
18 | AT4G01290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1744 Blast hits to 1308 proteins in 219 species: Archae - 0; Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink). |
-0.65 | 0.32 | -0.31 | |||
19 | AT3G22090 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71470.2); Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.32 | -0.33 | |||
20 | AT2G38640 | Protein of unknown function (DUF567) | -0.64 | 0.34 | -0.34 | |||
21 | AT4G10970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.64 | 0.31 | -0.31 | |||
22 | AT3G55130 | white-brown complex homolog 19 | ATP-binding cassette G19, white-brown complex homolog 19, white-brown complex homolog 19 |
-0.64 | 0.3 | -0.33 | ||
23 | AT1G79260 | CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.64 | 0.32 | -0.34 | |||
24 | AT4G40060 | homeobox protein 16 | ATHB-16, homeobox protein 16, homeobox protein 16 |
0.63 | 0.32 | -0.33 | ||
25 | AT5G58670 | phospholipase C1 | ARABIDOPSIS THALIANA PHOSPHOLIPASE C, phospholipase C1, phospholipase C 1, phospholipase C1 |
-0.63 | 0.3 | -0.32 | ||
26 | AT5G43520 | Cysteine/Histidine-rich C1 domain family protein | 0.63 | 0.32 | -0.31 | |||
27 | AT1G59820 | aminophospholipid ATPase 3 | aminophospholipid ATPase 3 | -0.63 | 0.33 | -0.32 | ||
28 | AT2G38740 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.63 | 0.31 | -0.31 | |||
29 | AT2G28660 | Chloroplast-targeted copper chaperone protein | 0.62 | 0.31 | -0.31 | |||
30 | AT5G17450 | Heavy metal transport/detoxification superfamily protein | heavy metal associated isoprenylated plant protein 21 |
-0.62 | 0.31 | -0.3 | ||
31 | AT3G17800 | Protein of unknown function (DUF760) | -0.62 | 0.31 | -0.3 | |||
32 | AT3G29370 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39240.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
P1R3 | 0.62 | 0.32 | -0.29 | ||
33 | AT5G67160 | HXXXD-type acyl-transferase family protein | ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 |
-0.62 | 0.32 | -0.31 | ||
34 | AT5G48720 | x-ray induced transcript 1 | X-RAY INDUCED TRANSCRIPT, X-RAY INDUCED TRANSCRIPT 1 |
0.62 | 0.32 | -0.32 | ||
35 | AT3G43700 | BTB-POZ and MATH domain 6 | BTB-POZ AND MATH DOMAIN 6, BTB-POZ and MATH domain 6 |
0.62 | 0.3 | -0.29 | ||
36 | AT1G10750 | Protein of Unknown Function (DUF239) | 0.61 | 0.33 | -0.33 | |||
37 | AT4G05210 | Trimeric LpxA-like enzymes superfamily protein | AtLpxD1, lipid X D1 | 0.61 | 0.32 | -0.31 | ||
38 | AT4G01010 | cyclic nucleotide-gated channel 13 | CYCLIC NUCLEOTIDE-GATED CHANNEL 13, cyclic nucleotide-gated channel 13 |
-0.61 | 0.33 | -0.31 | ||
39 | AT1G32730 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF702 (InterPro:IPR007818); Has 120 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 8; Metazoa - 63; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). |
0.61 | 0.31 | -0.33 | |||
40 | AT5G54310 | ARF-GAP domain 5 | ARF-GAP domain 5, NEVERSHED | -0.6 | 0.31 | -0.32 | ||
41 | AT3G32190 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G32590.1); Has 4211 Blast hits to 3490 proteins in 479 species: Archae - 79; Bacteria - 478; Metazoa - 1994; Fungi - 436; Plants - 174; Viruses - 22; Other Eukaryotes - 1028 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
42 | AT1G05805 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.6 | 0.33 | -0.32 | |||
43 | AT5G67580 | Homeodomain-like/winged-helix DNA-binding family protein | ATTBP3, TELOMERE REPEAT BINDING FACTOR 2, TELOMERE-BINDING PROTEIN 3, TRB2 |
-0.6 | 0.32 | -0.31 | ||
44 | AT3G09920 | phosphatidyl inositol monophosphate 5 kinase | phosphatidyl inositol monophosphate 5 kinase |
-0.6 | 0.33 | -0.33 | ||
45 | AT2G37330 | aluminum sensitive 3 | ALUMINUM SENSITIVE 3 | -0.6 | 0.3 | -0.33 | ||
46 | AT4G17370 | Oxidoreductase family protein | -0.6 | 0.28 | -0.32 | |||
47 | AT1G68120 | basic pentacysteine 3 | ATBPC3, basic pentacysteine 3 | 0.6 | 0.32 | -0.32 | ||
48 | AT1G63480 | AT hook motif DNA-binding family protein | 0.6 | 0.33 | -0.31 | |||
49 | AT4G18790 | NRAMP metal ion transporter family protein | ATNRAMP5, NRAMP5 | -0.6 | 0.35 | -0.3 | ||
50 | AT5G50120 | Transducin/WD40 repeat-like superfamily protein | 0.59 | 0.31 | -0.29 | |||
51 | AT1G62010 | Mitochondrial transcription termination factor family protein |
0.59 | 0.32 | -0.31 | |||
52 | AT2G25710 | holocarboxylase synthase 1 | holocarboxylase synthase 1 | 0.59 | 0.31 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
53 | C0014 | O-Acetylserine | O-Acetyl-L-serine | O-Acetyl-L-serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
-0.67 | 0.3 | -0.31 | ||
54 | C0233 | Sinapinic acid | - | cis-Sinapinate; Sinapate | ferulate and sinapate biosynthesis, sinapate ester biosynthesis, free phenylpropanoid acid biosynthesis |
-0.65 | 0.44 | -0.44 |