AGICode | AT5G12990 |
Description | CLAVATA3/ESR-RELATED 40 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G12990 | CLAVATA3/ESR-RELATED 40 | CLAVATA3/ESR-RELATED 40 | 1 | 0.32 | -0.31 | ||
2 | AT3G58060 | Cation efflux family protein | 0.69 | 0.29 | -0.32 | |||
3 | AT1G76670 | Nucleotide-sugar transporter family protein | 0.66 | 0.33 | -0.33 | |||
4 | AT5G37380 | Chaperone DnaJ-domain superfamily protein | 0.66 | 0.31 | -0.32 | |||
5 | AT3G07450 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.64 | 0.31 | -0.32 | |||
6 | AT3G62170 | VANGUARD 1 homolog 2 | VANGUARD 1 homolog 2 | -0.64 | 0.31 | -0.33 | ||
7 | AT1G04670 | unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.3 | -0.31 | |||
8 | AT5G67470 | formin homolog 6 | ARABIDOPSIS FORMIN HOMOLOG 6, formin homolog 6 |
0.61 | 0.33 | -0.32 | ||
9 | AT1G63970 | isoprenoid F | isoprenoid F, 2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE |
0.61 | 0.3 | -0.31 | ||
10 | AT3G46750 | unknown protein; Has 2631 Blast hits to 1984 proteins in 271 species: Archae - 6; Bacteria - 163; Metazoa - 1232; Fungi - 253; Plants - 141; Viruses - 8; Other Eukaryotes - 828 (source: NCBI BLink). |
0.61 | 0.3 | -0.33 | |||
11 | AT3G05180 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.6 | 0.32 | -0.31 | |||
12 | AT3G05800 | AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 |
AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 |
0.6 | 0.3 | -0.32 | ||
13 | AT3G59260 | pirin, putative | 0.59 | 0.32 | -0.29 | |||
14 | AT1G74110 | cytochrome P450, family 78, subfamily A, polypeptide 10 | cytochrome P450, family 78, subfamily A, polypeptide 10 |
-0.59 | 0.33 | -0.32 | ||
15 | AT3G32040 | Terpenoid synthases superfamily protein | -0.58 | 0.31 | -0.32 | |||
16 | AT3G33064 | transposable element gene | 0.58 | 0.31 | -0.31 | |||
17 | AT5G02460 | Dof-type zinc finger DNA-binding family protein | 0.58 | 0.33 | -0.32 | |||
18 | AT1G78160 | pumilio 7 | pumilio 7, pumilio 7 | 0.56 | 0.33 | -0.31 | ||
19 | AT4G01190 | phosphatidylinositol phosphate kinase 10 | phosphatidylinositol phosphate kinase 10, phosphatidylinositol phosphate kinase 10 |
-0.56 | 0.3 | -0.31 | ||
20 | AT5G47440 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
-0.56 | 0.31 | -0.3 | |||
21 | AT5G02650 | BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2); Has 20 Blast hits to 20 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.31 | -0.32 | |||
22 | AT5G60310 | Concanavalin A-like lectin protein kinase family protein | -0.55 | 0.31 | -0.31 | |||
23 | AT3G26400 | eukaryotic translation initiation factor 4B1 | eukaryotic translation initiation factor 4B1 |
0.55 | 0.31 | -0.32 | ||
24 | AT2G44420 | protein N-terminal asparagine amidohydrolase family protein | -0.54 | 0.31 | -0.32 | |||
25 | AT4G36870 | BEL1-like homeodomain 2 | BEL1-like homeodomain 2, SAWTOOTH 1 |
0.54 | 0.3 | -0.32 | ||
26 | AT1G18310 | glycosyl hydrolase family 81 protein | -0.54 | 0.32 | -0.3 | |||
27 | AT3G14650 | cytochrome P450, family 72, subfamily A, polypeptide 11 | cytochrome P450, family 72, subfamily A, polypeptide 11 |
0.54 | 0.33 | -0.31 | ||
28 | AT3G06870 | proline-rich family protein | 0.54 | 0.33 | -0.31 | |||
29 | AT3G25090 | F-box associated ubiquitination effector family protein | 0.53 | 0.31 | -0.3 | |||
30 | AT5G35090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.53 | 0.33 | -0.32 | |||
31 | AT5G59170 | Proline-rich extensin-like family protein | 0.52 | 0.3 | -0.33 | |||
32 | AT1G29710 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.52 | 0.29 | -0.3 | |||
33 | AT5G58820 | Subtilisin-like serine endopeptidase family protein | -0.52 | 0.31 | -0.32 | |||
34 | AT4G34660 | SH3 domain-containing protein | 0.52 | 0.33 | -0.31 | |||
35 | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.52 | 0.3 | -0.31 | |||
36 | AT1G73280 | serine carboxypeptidase-like 3 | serine carboxypeptidase-like 3 | -0.51 | 0.32 | -0.3 | ||
37 | AT5G37090 | transposable element gene | -0.51 | 0.31 | -0.35 | |||
38 | AT4G38070 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.51 | 0.3 | -0.31 | |||
39 | AT3G30350 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 4 | -0.5 | 0.36 | -0.31 | ||
40 | AT1G33770 | Protein kinase superfamily protein | -0.48 | 0.29 | -0.32 | |||
41 | AT1G37020 | Cysteine proteinases superfamily protein | -0.46 | 0.34 | -0.32 | |||
42 | AT5G64610 | histone acetyltransferase of the MYST family 1 | histone acetyltransferase of the MYST family 1 |
-0.46 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
43 | C0214 | PR_MST_2412.1 | - | - | - | 0.77 | 0.42 | -0.44 | ||
44 | C0001 | α-Linolenic acid | - | (9,12,15)-Linolenate | traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, poly-hydroxy fatty acids biosynthesis, jasmonic acid biosynthesis |
0.74 | 0.44 | -0.43 | ||
45 | C0215 | PR_MST_2527.1 | - | - | - | 0.73 | 0.46 | -0.44 | ||
46 | C0012 | n-Eicosanoic acid | - | Arachidate | fatty acid activation, fatty acid ω-oxidation, sporopollenin precursor biosynthesis, acyl-ACP thioesterase pathway, ceramide degradation, fatty acid α-oxidation, fatty acid ω-oxidation, phospholipases, triacylglycerol degradation |
0.72 | 0.43 | -0.44 | ||
47 | C0086 | Disinapylspermidine | - | - | - | 0.68 | 0.43 | -0.44 | ||
48 | C0213 | PR_MST_2410.2 | - | - | - | 0.68 | 0.44 | -0.45 | ||
49 | C0195 | Phenylpyruvic acid | - | Phenylpyruvate | phenylalanine degradation III | -0.61 | 0.46 | -0.42 | ||
50 | C0139 | Linoleic acid | n-cis,cis-9,12-Octadecadienoic acid | Linoleate | poly-hydroxy fatty acids biosynthesis, traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, crepenynic acid biosynthesis |
0.54 | 0.33 | -0.31 |