AT5G13270 : REQUIRED FOR ACCD RNA EDITING 1
Query Information
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AGICode AT5G13270
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 1 0.33 -0.3
2 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.79 0.31 -0.31
3 AT1G04860 ubiquitin-specific protease 2 ATUBP2, ubiquitin-specific
protease 2		 0.77 0.33 -0.32
4 AT3G57890 Tubulin binding cofactor C domain-containing protein 0.77 0.32 -0.31
5 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.77 0.33 -0.31
6 AT3G54400 Eukaryotic aspartyl protease family protein 0.76 0.32 -0.3
7 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.76 0.31 -0.32
8 AT5G24570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.76 0.31 -0.32
9 AT1G26850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.74 0.29 -0.33
10 AT1G22730 MA3 domain-containing protein 0.73 0.31 -0.3
11 AT4G33650 dynamin-related protein 3A ARABIDOPSIS DYNAMIN-LIKE 2,
ABERRANT PEROXISOME MORPHOLOGY 1,
dynamin-related protein 3A		 0.73 0.32 -0.32
12 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.73 0.31 -0.3
13 AT3G15000 cobalt ion binding 0.73 0.31 -0.32
14 AT3G17830 Molecular chaperone Hsp40/DnaJ family protein 0.73 0.33 -0.29
15 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.3 -0.32
16 AT5G10840 Endomembrane protein 70 protein family 0.73 0.3 -0.32
17 AT2G22125 binding cellulose synthase-interactive
protein 1, POM-POM 2		 0.73 0.32 -0.31
18 AT4G32410 cellulose synthase 1 CELLULOSE SYNTHASE 1, cellulose
synthase 1, RADIALLY SWOLLEN 1		 0.72 0.32 -0.3
19 AT1G78930 Mitochondrial transcription termination factor family
protein		 0.72 0.33 -0.3
20 AT4G18520 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.3 -0.31
21 AT2G42520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.32 -0.32
22 AT1G53500 NAD-dependent epimerase/dehydratase family protein ARABIDOPSIS THALIANA
MUCILAGE-MODIFIED 4, ARABIDOPSIS
THALIANA RHAMNOSE BIOSYNTHESIS 2,
MUCILAGE-MODIFIED 4, RHAMNOSE
BIOSYNTHESIS 2		 0.72 0.32 -0.34
23 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.32 -0.31
24 AT3G23820 UDP-D-glucuronate 4-epimerase 6 UDP-D-glucuronate 4-epimerase 6 0.72 0.35 -0.3
25 AT5G46920 Intron maturase, type II family protein 0.72 0.29 -0.32
26 AT3G27550 RNA-binding CRS1 / YhbY (CRM) domain protein 0.71 0.32 -0.32
27 AT3G30843 transposable element gene 0.71 0.3 -0.31
28 AT5G49500 Signal recognition particle, SRP54 subunit protein -0.71 0.31 -0.32
29 AT2G41960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast
hits to 7260 proteins in 458 species: Archae - 17; Bacteria
- 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses
- 38; Other Eukaryotes - 4487 (source: NCBI BLink).		 0.71 0.3 -0.31
30 AT1G28060 Pre-mRNA-splicing factor 3 0.71 0.31 -0.33
31 AT3G51550 Malectin/receptor-like protein kinase family protein FERONIA 0.71 0.32 -0.31
32 AT1G20920 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.34 -0.32
33 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.71 0.29 -0.31
34 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 -0.71 0.33 -0.3
35 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 0.71 0.29 -0.32
36 AT5G05820 Nucleotide-sugar transporter family protein 0.7 0.32 -0.32
37 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.32 -0.31
38 AT3G27390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40640.1); Has 101 Blast
hits to 99 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.32
39 AT1G06530 Tropomyosin-related peroxisomal and mitochondrial
division factor 2		 0.69 0.31 -0.31
40 AT3G58060 Cation efflux family protein 0.69 0.32 -0.32
41 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.69 0.3 -0.31
42 AT5G67060 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 HECATE 1 0.69 0.32 -0.32
43 AT3G05800 AtBS1(activation-tagged BRI1 suppressor 1)-interacting
factor 1		 AtBS1(activation-tagged BRI1
suppressor 1)-interacting factor 1		 0.69 0.31 -0.3
44 AT3G08620 RNA-binding KH domain-containing protein 0.68 0.32 -0.31
45 AT3G47520 malate dehydrogenase malate dehydrogenase, plastidic
NAD-dependent malate dehydrogenase		 0.68 0.31 -0.3
46 AT5G09320 Vacuolar sorting protein 9 (VPS9) domain VPS9B 0.68 0.31 -0.32
47 AT5G47720 Thiolase family protein -0.68 0.32 -0.31
48 AT5G14310 carboxyesterase 16 carboxyesterase 16,
carboxyesterase 16		 0.68 0.32 -0.3
49 AT4G38880 GLN phosphoribosyl pyrophosphate amidotransferase 3 GLN phosphoribosyl pyrophosphate
amidotransferase 3, GLN
phosphoribosyl pyrophosphate
amidotransferase 3		 0.67 0.33 -0.29
50 AT5G66200 armadillo repeat only 2 armadillo repeat only 2 0.67 0.32 -0.31
51 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.32 -0.31
52 AT5G58130 RNA-binding (RRM/RBD/RNP motifs) family protein REPRESSOR OF SILENCING 3 0.66 0.3 -0.32
53 AT1G70630 Nucleotide-diphospho-sugar transferase family protein 0.66 0.31 -0.3
54 AT1G60620 RNA polymerase I subunit 43 RNA polymerase I subunit 43, RNA
polymerase I subunit 43		 0.66 0.32 -0.32
55 AT5G16220 Octicosapeptide/Phox/Bem1p family protein 0.66 0.32 -0.32
56 AT5G21040 F-box protein 2 F-box protein 2 0.66 0.31 -0.31
57 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.66 0.3 -0.3
58 AT3G03580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.31 -0.32
59 AT1G77010 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.32 -0.3
60 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 0.66 0.3 -0.31
61 AT4G09570 calcium-dependent protein kinase 4 ATCPK4, calcium-dependent protein
kinase 4		 0.66 0.32 -0.32
62 AT3G09320 DHHC-type zinc finger family protein 0.65 0.28 -0.3
63 AT5G62030 diphthamide synthesis DPH2 family protein 0.65 0.32 -0.31
64 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.65 0.32 -0.3
65 AT1G74260 purine biosynthesis 4 purine biosynthesis 4 0.65 0.32 -0.32
66 AT1G06450 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.65 0.32 -0.31
67 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 0.65 0.3 -0.32
68 AT3G06200 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.32 -0.31
69 AT3G12140 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML1, EMSY-like 1 0.64 0.31 -0.31
70 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein 0.64 0.29 -0.3
71 AT2G35530 basic region/leucine zipper transcription factor 16 AtbZIP16, basic region/leucine
zipper transcription factor 16		 0.64 0.34 -0.32
72 AT3G03320 RNA-binding ASCH domain protein -0.63 0.3 -0.3
73 AT4G19670 RING/U-box superfamily protein -0.63 0.33 -0.31
74 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.62 0.31 -0.31
75 AT2G15440 Protein of unknown function (DUF579) -0.62 0.32 -0.3
76 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.62 0.3 -0.3
77 AT2G47120 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.31 -0.31
78 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein -0.61 0.29 -0.33
79 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.6 0.33 -0.29
80 AT3G09410 Pectinacetylesterase family protein -0.6 0.28 -0.32
81 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.6 0.3 -0.33
82 AT1G78950 Terpenoid cyclases family protein -0.6 0.32 -0.31
83 AT1G47410 unknown protein; Has 26 Blast hits to 26 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.29
84 AT1G16460 rhodanese homologue 2 ARABIDOPSIS THALIANA
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
MERCAPTOPYRUVATE SULFURTRANSFERASE
2, rhodanese homologue 2,
SULFURTRANSFERASE 2,
SULFURTRANSFERASE 2		 -0.59 0.29 -0.29
85 AT1G23340 Protein of Unknown Function (DUF239) -0.59 0.31 -0.33
86 AT3G63480 ATP binding microtubule motor family protein -0.59 0.32 -0.33
87 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 -0.58 0.3 -0.31
88 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.58 0.31 -0.31
89 AT4G20420 Tapetum specific protein TAP35/TAP44 -0.56 0.29 -0.31
90 AT2G15640 F-box family protein -0.55 0.31 -0.3
91 AT4G17790 SNARE associated Golgi protein family -0.55 0.32 -0.32
92 AT4G02160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G61710.1); Has 35 Blast hits
to 35 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.31
93 AT5G40020 Pathogenesis-related thaumatin superfamily protein -0.54 0.35 -0.36
94 ATMG00140 hypothetical protein ORF167 -0.54 0.32 -0.34
95 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.53 0.31 -0.32
96 AT2G45040 Matrixin family protein -0.53 0.3 -0.32
97 AT3G30710 transposable element gene -0.53 0.3 -0.3
98 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.53 0.31 -0.3
99 AT1G34240 transposable element gene -0.53 0.33 -0.32
100 AT2G05820 transposable element gene -0.53 0.33 -0.33
101 AT5G01360 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 3 -0.52 0.31 -0.3
102 AT5G10180 slufate transporter 2;1 ARABIDOPSIS SULFATE TRANSPORTER
68, sulfate transporter 2;1		 -0.52 0.31 -0.33
103 AT2G44000 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.52 0.33 -0.3
104 AT1G07380 Neutral/alkaline non-lysosomal ceramidase -0.52 0.31 -0.33
105 AT1G17240 receptor like protein 2 receptor like protein 2, receptor
like protein 2		 -0.51 0.33 -0.35
106 AT3G32040 Terpenoid synthases superfamily protein -0.51 0.33 -0.3
107 AT5G47635 Pollen Ole e 1 allergen and extensin family protein -0.51 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0215 PR_MST_2527.1 - - - 0.78 0.44 -0.44
109 C0126 Isorhamnetin-dirhamnoside - - - 0.72 0.45 -0.41
110 C0173 MST_2301.7 - - - 0.72 0.46 -0.42
111 C0214 PR_MST_2412.1 - - - 0.65 0.44 -0.44