AT5G12190 : -
Query Information
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AGICode AT5G12190
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.32 -0.33
2 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.83 0.31 -0.32
3 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.79 0.31 -0.32
4 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.79 0.32 -0.32
5 AT5G53560 cytochrome B5 isoform E ATB5-A, ARABIDOPSIS CYTOCHROME B5
ISOFORM E, B5 #2, cytochrome B5
isoform E		 0.78 0.32 -0.33
6 AT1G79390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.34 -0.34
7 AT1G05180 NAD(P)-binding Rossmann-fold superfamily protein AUXIN RESISTANT 1 0.75 0.33 -0.34
8 AT5G66510 gamma carbonic anhydrase 3 gamma carbonic anhydrase 3 0.75 0.34 -0.3
9 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.33 -0.34
10 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.74 0.3 -0.3
11 AT5G47570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.74 0.31 -0.31
12 AT4G00585 unknown protein; Has 47 Blast hits to 47 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7;
Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.74 0.31 -0.31
13 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase		 0.74 0.3 -0.31
14 AT1G04690 potassium channel beta subunit 1 potassium channel beta subunit 1,
KV-BETA1		 0.74 0.32 -0.32
15 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 0.73 0.29 -0.34
16 AT5G09450 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.3 -0.3
17 AT5G17280 CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal
(InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.73 0.3 -0.3
18 AT5G50870 ubiquitin-conjugating enzyme 27 ubiquitin-conjugating enzyme 27 0.73 0.32 -0.32
19 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.72 0.31 -0.31
20 AT1G15120 Ubiquinol-cytochrome C reductase hinge protein 0.72 0.32 -0.31
21 AT4G39520 GTP-binding protein-related 0.72 0.32 -0.31
22 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 0.71 0.29 -0.32
23 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 caffeoyl coenzyme A
O-methyltransferase 1		 0.71 0.3 -0.32
24 AT2G33040 gamma subunit of Mt ATP synthase gamma subunit of Mt ATP synthase 0.71 0.32 -0.29
25 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.71 0.3 -0.35
26 AT1G15470 Transducin/WD40 repeat-like superfamily protein 0.71 0.3 -0.3
27 AT2G34520 mitochondrial ribosomal protein S14 mitochondrial ribosomal protein
S14		 0.7 0.32 -0.33
28 AT4G14420 HR-like lesion-inducing protein-related 0.7 0.33 -0.31
29 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.69 0.29 -0.32
30 AT1G27450 adenine phosphoribosyl transferase 1 adenine phosphoribosyl transferase
1, ARABIDOPSIS THALIANA ADENINE
PHOSPHORIBOSYLTRANSFERASE 1		 0.69 0.33 -0.32
31 AT1G25520 Uncharacterized protein family (UPF0016) 0.69 0.32 -0.35
32 AT5G53470 acyl-CoA binding protein 1 ACYL-COA BINDING PROTEIN, acyl-CoA
binding protein 1		 0.69 0.31 -0.32
33 AT2G22360 DNAJ heat shock family protein 0.68 0.32 -0.32
34 AT3G57870 sumo conjugation enzyme 1 AHUS5, SUMO CONJUGATION ENZYME 1,
EMBRYO DEFECTIVE 1637, sumo
conjugation enzyme 1, SUMO
CONJUGATING ENZYME 1A		 0.68 0.32 -0.31
35 AT1G04260 CAMV movement protein interacting protein 7 CAMV movement protein interacting
protein 7, CAMV MOVEMENT PROTEIN
INTERACTING PROTEIN 7, PRENYLATED
RAB ACCEPTOR 1.D		 0.68 0.32 -0.31
36 AT3G21140 Pyridoxamine 5'-phosphate oxidase family protein 0.68 0.31 -0.32
37 AT4G30010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39
proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.32 -0.32
38 AT1G19130 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold
(InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins
in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19;
Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink).		 0.68 0.32 -0.3
39 AT1G24030 Protein kinase superfamily protein -0.68 0.32 -0.32
40 AT5G67530 plant U-box 49 PLANT U-BOX 49, plant U-box 49 0.67 0.31 -0.3
41 AT5G38480 general regulatory factor 3 general regulatory factor 3, RCI1 0.67 0.31 -0.32
42 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3		 0.67 0.31 -0.32
43 AT5G13070 MSF1-like family protein 0.67 0.31 -0.29
44 AT2G02050 NADH-ubiquinone oxidoreductase B18 subunit, putative 0.66 0.3 -0.29
45 AT3G21280 ubiquitin-specific protease 7 ubiquitin-specific protease 7 0.66 0.32 -0.32
46 AT3G20330 PYRIMIDINE B PYRIMIDINE B 0.66 0.3 -0.31
47 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like 0.66 0.31 -0.31
48 AT1G80230 Rubredoxin-like superfamily protein 0.66 0.3 -0.33
49 AT1G31940 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.31 -0.33
50 AT1G75510 Transcription initiation factor IIF, beta subunit 0.66 0.31 -0.31
51 AT4G35290 glutamate receptor 2 ATGLR3.2, ATGLUR2, GLUTAMATE
RECEPTOR 3.2, glutamate receptor 2		 -0.65 0.32 -0.32
52 AT2G45240 methionine aminopeptidase 1A methionine aminopeptidase 1A 0.65 0.32 -0.32
53 AT1G69960 serine/threonine protein phosphatase 2A serine/threonine protein
phosphatase 2A		 0.65 0.31 -0.32
54 AT3G44370 Membrane insertion protein, OxaA/YidC with
tetratricopeptide repeat domain		 0.65 0.31 -0.31
55 AT5G50370 Adenylate kinase family protein 0.65 0.3 -0.31
56 AT1G80040 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system
component Cue (InterPro:IPR003892); BEST Arabidopsis
thaliana protein match is: Ubiquitin system component Cue
protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.33 -0.3
57 AT4G17270 Mo25 family protein 0.64 0.32 -0.31
58 AT3G50780 BEST Arabidopsis thaliana protein match is: BTB/POZ
domain-containing protein (TAIR:AT1G63850.1); Has 298 Blast
hits to 298 proteins in 22 species: Archae - 0; Bacteria -
0; Metazoa - 10; Fungi - 0; Plants - 287; Viruses - 0;
Other Eukaryotes - 1 (source: NCBI BLink).		 -0.64 0.32 -0.31
59 AT4G24830 arginosuccinate synthase family 0.64 0.32 -0.29
60 AT1G19835 Plant protein of unknown function (DUF869) -0.64 0.33 -0.34
61 AT3G61440 cysteine synthase C1 BETA-SUBSTITUTED ALA SYNTHASE 3;1,
CYSTEINE SYNTHASE C1, cysteine
synthase C1		 0.64 0.33 -0.3
62 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.64 0.32 -0.32
63 AT5G43140 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.63 0.31 -0.32
64 AT4G36550 ARM repeat superfamily protein -0.63 0.31 -0.32
65 AT4G30940 BTB/POZ domain with WD40/YVTN repeat-like protein -0.63 0.31 -0.31
66 AT1G77570 Winged helix-turn-helix transcription repressor DNA-binding 0.63 0.33 -0.34
67 AT5G40930 translocase of outer membrane 20-4 translocase of outer membrane 20-4 0.63 0.32 -0.31
68 AT5G09890 Protein kinase family protein 0.63 0.31 -0.31
69 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 -0.63 0.31 -0.32
70 AT1G17510 unknown protein; Has 11 Blast hits to 11 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.31 -0.32
71 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.3 -0.32
72 AT1G07485 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex,
embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis,
D bilateral stage; Has 5 Blast hits to 5 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.31 -0.28
73 AT1G77310 BEST Arabidopsis thaliana protein match is:
wound-responsive family protein (TAIR:AT1G21610.1); Has 493
Blast hits to 482 proteins in 163 species: Archae - 0;
Bacteria - 100; Metazoa - 172; Fungi - 66; Plants - 65;
Viruses - 7; Other Eukaryotes - 83 (source: NCBI BLink).		 -0.62 0.34 -0.28
74 AT2G30560 glycine-rich protein -0.61 0.28 -0.31
75 AT5G27800 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.6 0.31 -0.31
76 AT5G39910 Pectin lyase-like superfamily protein -0.6 0.32 -0.35
77 AT3G20150 Kinesin motor family protein -0.6 0.33 -0.32
78 AT1G44780 CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ
(InterPro:IPR019098); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G08310.1); Has 18105
Blast hits to 11200 proteins in 808 species: Archae - 37;
Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants -
674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI
BLink).		 -0.58 0.3 -0.33
79 AT2G16410 transposable element gene -0.58 0.31 -0.32
80 AT5G14880 Potassium transporter family protein -0.58 0.35 -0.31
81 AT3G45680 Major facilitator superfamily protein -0.57 0.3 -0.3
82 AT5G18370 Disease resistance protein (TIR-NBS-LRR class) family -0.57 0.31 -0.32
83 AT4G37230 Photosystem II manganese-stabilising protein (PsbO) family -0.56 0.31 -0.33
84 AT2G42290 Leucine-rich repeat protein kinase family protein -0.56 0.32 -0.35
85 AT5G28930 transposable element gene -0.55 0.31 -0.3
86 AT2G27740 Family of unknown function (DUF662) -0.55 0.31 -0.32
87 AT4G15460 glycine-rich protein -0.55 0.3 -0.31
88 AT3G07520 glutamate receptor 1.4 ATGLR1.4, glutamate receptor 1.4 -0.55 0.31 -0.32
89 AT5G57670 Protein kinase superfamily protein -0.55 0.32 -0.31
90 AT3G24715 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.54 0.33 -0.32
91 AT5G10970 C2H2 and C2HC zinc fingers superfamily protein -0.54 0.32 -0.31
92 AT3G29630 UDP-Glycosyltransferase superfamily protein -0.54 0.31 -0.32
93 AT3G30396 transposable element gene -0.54 0.32 -0.31
94 AT1G35617 unknown protein; Has 262 Blast hits to 207 proteins in 54
species: Archae - 0; Bacteria - 28; Metazoa - 70; Fungi -
8; Plants - 93; Viruses - 20; Other Eukaryotes - 43
(source: NCBI BLink).		 -0.54 0.32 -0.33
95 AT4G26540 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.54 0.3 -0.34
96 AT5G18610 Protein kinase superfamily protein -0.53 0.32 -0.32
97 AT1G27190 Leucine-rich repeat protein kinase family protein -0.53 0.3 -0.31
98 AT2G32000 DNA topoisomerase, type IA, core -0.53 0.33 -0.33
99 AT3G27350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G40700.1); Has 230 Blast
hits to 202 proteins in 35 species: Archae - 0; Bacteria -
3; Metazoa - 77; Fungi - 4; Plants - 130; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 -0.53 0.33 -0.3
100 AT4G28130 diacylglycerol kinase 6 ATDGK6, diacylglycerol kinase 6 -0.53 0.31 -0.31
101 AT3G08550 elongation defective 1 protein / ELD1 protein ABA INSENSITIVE 8, ELONGATION
DEFECTIVE 1, KOBITO		 -0.52 0.31 -0.32
102 AT2G02750 Pentatricopeptide repeat (PPR) superfamily protein -0.52 0.32 -0.3
103 AT1G65350 ubiquitin 13 ubiquitin 13 -0.52 0.3 -0.32
104 AT4G10710 global transcription factor C global transcription factor C -0.51 0.3 -0.33
105 AT2G28330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G08035.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.35 -0.32
106 AT4G36600 Late embryogenesis abundant (LEA) protein -0.51 0.31 -0.33
107 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.51 0.3 -0.32
108 AT3G44070 Glycosyl hydrolase family 35 protein -0.5 0.32 -0.29
109 AT5G11180 glutamate receptor 2.6 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.6, glutamate receptor
2.6		 -0.5 0.33 -0.32
110 AT1G30440 Phototropic-responsive NPH3 family protein -0.5 0.31 -0.34
111 AT2G34290 Protein kinase superfamily protein -0.5 0.31 -0.3
112 AT4G09880 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.31 -0.32
113 AT1G80140 Pectin lyase-like superfamily protein -0.5 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.81 0.47 -0.45 C0266
115 C0181 MST_2904.3 - - - -0.6 0.44 -0.43
116 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis -0.6 0.47 -0.45 C0240
117 C0238 Sitosterol 3-O-β-D-glucoside - 3-O-β-D-Glucosyl-β-sitosterol sphingolipid biosynthesis -0.54 0.31 -0.35 C0238
118 C0064 Campesterol 3-O-β-D-glucoside - - - -0.53 0.35 -0.34