AT5G10940 : ALTERED SEED GERMINATION 2
Query Information
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AGICode AT5G10940
Description transducin family protein / WD-40 repeat family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 1 0.3 -0.34
2 AT1G12070 Immunoglobulin E-set superfamily protein -0.82 0.33 -0.33
3 AT1G05210 Transmembrane protein 97, predicted -0.81 0.31 -0.31
4 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 0.78 0.3 -0.31
5 AT3G52940 Ergosterol biosynthesis ERG4/ERG24 family EXTRA-LONG-LIFESPAN 1, FACKEL,
HYD2		 -0.77 0.32 -0.31
6 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.77 0.33 -0.32
7 AT3G03220 expansin A13 EXPANSIN 13, expansin A13, ATHEXP
ALPHA 1.22, EXP13, expansin A13		 -0.77 0.32 -0.31
8 AT3G01100 hypothetical protein 1 ARABIDOPSIS THALIANA HYPOTHETICAL
PROTEIN 1, hypothetical protein 1		 0.77 0.31 -0.33
9 AT3G51310 VPS35 homolog C VPS35 homolog C 0.77 0.29 -0.32
10 AT5G01620 TRICHOME BIREFRINGENCE-LIKE 35 TRICHOME BIREFRINGENCE-LIKE 35 -0.77 0.3 -0.31
11 AT4G01110 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits
to 272 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.32 -0.32
12 AT5G58420 Ribosomal protein S4 (RPS4A) family protein -0.76 0.3 -0.31
13 AT3G12610 Leucine-rich repeat (LRR) family protein DNA-DAMAGE REPAIR/TOLERATION 100 -0.76 0.32 -0.3
14 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 0.76 0.33 -0.32
15 AT5G64650 Ribosomal protein L17 family protein -0.75 0.32 -0.29
16 AT3G27260 global transcription factor group E8 global transcription factor group
E8		 0.75 0.31 -0.33
17 AT1G11545 xyloglucan endotransglucosylase/hydrolase 8 xyloglucan
endotransglucosylase/hydrolase 8		 -0.75 0.32 -0.31
18 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.75 0.3 -0.31
19 AT5G65810 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 cotton Golgi-related 3 -0.74 0.32 -0.31
20 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 0.74 0.33 -0.33
21 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule 0.74 0.3 -0.31
22 AT3G26000 Ribonuclease inhibitor 0.74 0.31 -0.33
23 AT1G20010 tubulin beta-5 chain tubulin beta-5 chain -0.74 0.31 -0.31
24 AT3G50350 Protein of unknown function (DUF1685) -0.74 0.3 -0.32
25 AT1G18160 Protein kinase superfamily protein 0.74 0.34 -0.33
26 AT4G28050 tetraspanin7 tetraspanin7 -0.73 0.3 -0.33
27 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein -0.73 0.32 -0.3
28 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 0.73 0.32 -0.35
29 AT3G13674 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast
hits to 76 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.31 -0.3
30 AT5G66920 SKU5 similar 17 SKU5 similar 17 -0.73 0.31 -0.31
31 AT3G58120 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP61, BZIP61 -0.73 0.34 -0.31
32 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 -0.73 0.32 -0.33
33 AT3G20460 Major facilitator superfamily protein -0.73 0.3 -0.32
34 AT2G19750 Ribosomal protein S30 family protein -0.72 0.34 -0.33
35 AT1G75780 tubulin beta-1 chain tubulin beta-1 chain -0.72 0.31 -0.33
36 AT4G14320 Zinc-binding ribosomal protein family protein -0.72 0.31 -0.33
37 AT1G10550 xyloglucan:xyloglucosyl transferase 33 XYLOGLUCAN:XYLOGLUCOSYL
TRANSFERASE 33,
xyloglucan:xyloglucosyl
transferase 33		 -0.72 0.3 -0.32
38 AT3G28200 Peroxidase superfamily protein -0.72 0.31 -0.32
39 AT4G14960 Tubulin/FtsZ family protein TUA6 -0.72 0.31 -0.32
40 AT1G72260 thionin 2.1 thionin 2.1, THI2.1.1 0.72 0.33 -0.3
41 AT3G26910 hydroxyproline-rich glycoprotein family protein 0.72 0.29 -0.32
42 AT2G25740 ATP-dependent protease La (LON) domain protein 0.72 0.33 -0.3
43 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 -0.71 0.32 -0.32
44 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.71 0.31 -0.33
45 AT3G01320 SIN3-like 1 SIN3-like 1 0.71 0.31 -0.33
46 AT3G22300 ribosomal protein S10 ribosomal protein S10 -0.71 0.3 -0.31
47 AT1G35620 PDI-like 5-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 8, PDI-like
5-2, PROTEIN DISULFIDE ISOMERASE
8, PDI-like 5-2		 -0.71 0.31 -0.32
48 AT2G25210 Ribosomal protein L39 family protein -0.71 0.31 -0.33
49 AT4G23980 auxin response factor 9 auxin response factor 9 0.71 0.31 -0.31
50 AT1G53100 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.71 0.31 -0.33
51 AT3G10550 Myotubularin-like phosphatases II superfamily Arabidopsis thaliana myotubularin
1, myotubularin 1		 0.71 0.32 -0.31
52 AT1G23030 ARM repeat superfamily protein -0.71 0.32 -0.33
53 AT3G50110 PTEN 3 Arabidopsis thaliana phosphatase
and TENsin homolog deleted on
chromosome ten 3, PTEN 3,
phosphatase and TENsin homolog
deleted on chromosome ten 2B		 -0.7 0.32 -0.32
54 AT1G69480 EXS (ERD1/XPR1/SYG1) family protein 0.7 0.33 -0.3
55 AT1G32740 SBP (S-ribonuclease binding protein) family protein 0.7 0.31 -0.3
56 AT2G17975 zinc finger (Ran-binding) family protein 0.7 0.33 -0.32
57 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.7 0.33 -0.31
58 AT1G50410 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.7 0.3 -0.31
59 AT5G55310 DNA topoisomerase 1 beta TOPOISOMERASE 1, DNA topoisomerase
1 beta		 0.7 0.32 -0.33
60 AT4G01990 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.3 -0.29
61 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.7 0.32 -0.29
62 AT5G10260 RAB GTPase homolog H1E RAB GTPase homolog H1E, RAB GTPase
homolog H1E		 -0.7 0.29 -0.32
63 AT4G34140 D111/G-patch domain-containing protein 0.7 0.33 -0.31
64 AT1G64640 early nodulin-like protein 8 AtENODL8, early nodulin-like
protein 8		 -0.7 0.34 -0.32
65 AT4G30130 Protein of unknown function (DUF630 and DUF632) -0.69 0.32 -0.31
66 AT3G16940 calmodulin binding;transcription regulators 0.69 0.34 -0.34
67 AT3G25180 cytochrome P450, family 82, subfamily G, polypeptide 1 cytochrome P450, family 82,
subfamily G, polypeptide 1		 0.69 0.3 -0.32
68 AT2G43460 Ribosomal L38e protein family -0.69 0.34 -0.3
69 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.33 -0.31
70 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 0.69 0.32 -0.34
71 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1		 0.69 0.33 -0.32
72 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 0.69 0.32 -0.31
73 AT1G47200 WPP domain protein 2 WPP domain protein 2 -0.69 0.33 -0.31
74 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 0.69 0.31 -0.33
75 AT5G64670 Ribosomal protein L18e/L15 superfamily protein -0.69 0.33 -0.31
76 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 -0.69 0.3 -0.35
77 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a -0.69 0.33 -0.32
78 AT1G77750 Ribosomal protein S13/S18 family -0.69 0.32 -0.3
79 AT3G56230 BTB/POZ domain-containing protein -0.68 0.31 -0.32
80 AT4G18030 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.32 -0.33
81 AT5G64060 NAC domain containing protein 103 NAC domain containing protein 103,
NAC domain containing protein 103		 -0.68 0.3 -0.33
82 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.68 0.31 -0.3
83 AT2G30050 transducin family protein / WD-40 repeat family protein -0.68 0.31 -0.31
84 AT2G01450 MAP kinase 17 MAP kinase 17, MAP kinase 17 0.68 0.34 -0.3
85 AT3G27110 Peptidase family M48 family protein 0.68 0.31 -0.31
86 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 0.68 0.31 -0.32
87 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.68 0.32 -0.33
88 AT1G24330 ARM repeat superfamily protein 0.68 0.3 -0.32
89 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.68 0.29 -0.29
90 AT1G33270 Acyl transferase/acyl hydrolase/lysophospholipase
superfamily protein		 0.68 0.32 -0.29
91 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 -0.68 0.31 -0.34
92 AT5G11000 Plant protein of unknown function (DUF868) -0.68 0.33 -0.31
93 AT2G41840 Ribosomal protein S5 family protein -0.68 0.31 -0.31
94 AT2G37650 GRAS family transcription factor 0.68 0.33 -0.29
95 AT5G35180 Protein of unknown function (DUF1336) 0.68 0.3 -0.32
96 AT1G05100 mitogen-activated protein kinase kinase kinase 18 mitogen-activated protein kinase
kinase kinase 18		 0.68 0.34 -0.3
97 AT4G02120 CTP synthase family protein 0.67 0.33 -0.31
98 AT4G12760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.67 0.33 -0.29
99 AT1G09800 Pseudouridine synthase family protein -0.67 0.31 -0.31
100 AT1G11680 CYTOCHROME P450 51G1 CYTOCHROME P450 51, CYTOCHROME
P450 51A2, CYTOCHROME P450 51G1,
embryo defective 1738		 -0.67 0.3 -0.32
101 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.3 -0.31
102 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.67 0.3 -0.33
103 AT1G63220 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.67 0.31 -0.32
104 AT2G20520 FASCICLIN-like arabinogalactan 6 FASCICLIN-like arabinogalactan 6 -0.67 0.32 -0.31
105 AT2G31510 IBR domain-containing protein ARIADNE 7, ARABIDOPSIS ARIADNE 7 0.67 0.31 -0.31
106 AT1G55160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.31
107 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.67 0.32 -0.31
108 AT3G05100 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.67 0.3 -0.32
109 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 -0.67 0.31 -0.31
110 AT2G21200 SAUR-like auxin-responsive protein family -0.67 0.3 -0.3
111 AT1G70310 spermidine synthase 2 spermidine synthase 2 -0.67 0.31 -0.3
112 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein -0.67 0.32 -0.31
113 AT4G13210 Pectin lyase-like superfamily protein -0.67 0.33 -0.3
114 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 -0.66 0.31 -0.33
115 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.3 -0.29
116 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.66 0.32 -0.32
117 AT2G43200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.31 -0.34
118 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog 0.66 0.35 -0.31
119 AT5G13870 xyloglucan endotransglucosylase/hydrolase 5 endoxyloglucan transferase A4,
xyloglucan
endotransglucosylase/hydrolase 5		 -0.66 0.31 -0.34
120 AT5G26610 D111/G-patch domain-containing protein 0.66 0.3 -0.31
121 AT2G23980 cyclic nucleotide-gated channel 6 cyclic nucleotide-gated channel 6,
CYCLIC NUCLEOTIDE GATED CHANNEL 6,
cyclic nucleotide-gated channel 6		 0.66 0.32 -0.32
122 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.32 -0.31
123 AT2G26410 IQ-domain 4 IQ-domain 4 -0.66 0.31 -0.32
124 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 0.66 0.31 -0.3
125 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.33 -0.3
126 AT5G24380 YELLOW STRIPE like 2 YELLOW STRIPE LIKE 2, YELLOW
STRIPE like 2		 0.65 0.33 -0.31
127 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.33
128 AT4G35820 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.34 -0.31
129 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.65 0.3 -0.32
130 AT4G17370 Oxidoreductase family protein 0.65 0.31 -0.31
131 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.65 0.31 -0.3
132 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 0.65 0.33 -0.3
133 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.31 -0.3
134 AT2G38800 Plant calmodulin-binding protein-related 0.65 0.31 -0.29
135 AT5G43930 Transducin family protein / WD-40 repeat family protein 0.64 0.31 -0.3
136 AT1G14660 Na+/H+ exchanger 8 Na+/H+ exchanger 8, Na+/H+
exchanger 8, SODIUM HYDROGEN
EXCHANGER 8		 0.64 0.33 -0.32
137 AT3G21670 Major facilitator superfamily protein 0.64 0.32 -0.3
138 AT4G15475 F-box/RNI-like superfamily protein 0.64 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
139 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.72 0.51 -0.51 C0151