AT5G11010 : -
Query Information
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AGICode AT5G11010
Description Pre-mRNA cleavage complex II protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G11010 Pre-mRNA cleavage complex II protein family 1 0.34 -0.3
2 AT4G31130 Protein of unknown function (DUF1218) 0.82 0.29 -0.31
3 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 0.81 0.31 -0.31
4 AT3G28200 Peroxidase superfamily protein 0.8 0.31 -0.33
5 AT5G20570 RING-box 1 RING-BOX 1, HRT1, RING-box 1,
REGULATOR OF CULLINS-1		 0.8 0.32 -0.3
6 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.79 0.29 -0.31
7 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.79 0.31 -0.34
8 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.79 0.32 -0.32
9 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.79 0.35 -0.31
10 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.79 0.31 -0.31
11 AT1G75950 S phase kinase-associated protein 1 ARABIDOPSIS SKP1 HOMOLOGUE 1,
ATSKP1, S phase kinase-associated
protein 1, SKP1A, UFO INTERACTING
PROTEIN 1		 0.78 0.32 -0.32
12 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA 0.78 0.32 -0.31
13 AT2G43770 Transducin/WD40 repeat-like superfamily protein 0.78 0.31 -0.32
14 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.78 0.33 -0.32
15 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit 0.78 0.31 -0.3
16 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.77 0.29 -0.3
17 AT1G71900 Protein of unknown function (DUF803) 0.77 0.32 -0.3
18 AT4G29390 Ribosomal protein S30 family protein 0.77 0.31 -0.31
19 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.77 0.32 -0.3
20 AT3G29360 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 2 0.77 0.3 -0.33
21 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.77 0.29 -0.34
22 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.76 0.3 -0.32
23 AT2G37020 Translin family protein 0.76 0.32 -0.32
24 AT1G01910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.32 -0.32
25 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 0.76 0.31 -0.33
26 AT2G30050 transducin family protein / WD-40 repeat family protein 0.75 0.31 -0.32
27 AT1G25490 ARM repeat superfamily protein ATB BETA BETA, ENHANCED ETHYLENE
RESPONSE 1, ROOTS CURL IN NPA,
REGA		 0.75 0.31 -0.33
28 AT5G18520 Lung seven transmembrane receptor family protein 0.75 0.34 -0.32
29 AT3G47980 Integral membrane HPP family protein 0.75 0.28 -0.3
30 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 0.75 0.33 -0.32
31 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.75 0.35 -0.31
32 AT3G04830 Protein prenylyltransferase superfamily protein 0.74 0.33 -0.33
33 AT1G22530 PATELLIN 2 PATELLIN 2 0.74 0.33 -0.31
34 AT1G65650 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 UCH2 0.74 0.3 -0.32
35 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.74 0.34 -0.28
36 AT5G65430 general regulatory factor 8 14-3-3 PROTEIN G-BOX FACTOR14
KAPPA, GF14 KAPPA, general
regulatory factor 8		 0.74 0.32 -0.31
37 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.74 0.33 -0.31
38 AT3G57610 adenylosuccinate synthase adenylosuccinate synthase 0.74 0.31 -0.29
39 AT1G05850 Chitinase family protein ATCTL1, CHITINASE-LIKE PROTEIN 1,
ECTOPIC DEPOSITION OF LIGNIN IN
PITH, ECTOPIC DEPOSITION OF LIGNIN
IN PITH 1, ECTOPIC ROOT HAIR 2,
SENSITIVE TO HOT TEMPERATURES 2,
POM-POM1		 0.74 0.3 -0.33
40 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 0.74 0.3 -0.3
41 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2		 0.73 0.32 -0.32
42 AT3G12720 myb domain protein 67 myb domain protein 67, ATY53,
MYB67, myb domain protein 67		 -0.73 0.33 -0.31
43 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.73 0.34 -0.31
44 AT1G45688 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast
hits to 242 proteins in 39 species: Archae - 0; Bacteria -
11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17;
Other Eukaryotes - 8 (source: NCBI BLink).		 0.73 0.32 -0.3
45 AT4G12730 FASCICLIN-like arabinogalactan 2 FASCICLIN-like arabinogalactan 2 0.73 0.34 -0.31
46 AT5G06660 Protein of unknown function DUF106, transmembrane 0.73 0.29 -0.31
47 AT2G47170 Ras-related small GTP-binding family protein ARF1A1C 0.73 0.3 -0.32
48 AT5G49820 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 6 0.73 0.31 -0.34
49 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.73 0.33 -0.32
50 AT5G57460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to
166 proteins in 41 species: Archae - 0; Bacteria - 0;
Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.72 0.31 -0.33
51 AT3G07300 NagB/RpiA/CoA transferase-like superfamily protein 0.72 0.32 -0.31
52 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 0.72 0.35 -0.32
53 AT5G05820 Nucleotide-sugar transporter family protein 0.72 0.31 -0.29
54 AT3G25545 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 38
Blast hits to 38 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.31 -0.31
55 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.72 0.29 -0.32
56 AT1G29150 non-ATPase subunit 9 non-ATPase subunit 9, REGULATORY
PARTICLE NON-ATPASE 6		 0.72 0.32 -0.33
57 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.72 0.32 -0.32
58 AT2G44610 Ras-related small GTP-binding family protein ATRAB6A, ATRABH1B, RAB6, RAB6A 0.72 0.32 -0.31
59 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.72 0.32 -0.3
60 AT3G52930 Aldolase superfamily protein 0.71 0.3 -0.33
61 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 0.71 0.32 -0.31
62 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 -0.71 0.32 -0.34
63 AT5G20500 Glutaredoxin family protein 0.71 0.3 -0.33
64 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 0.71 0.33 -0.32
65 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.71 0.31 -0.28
66 AT5G47030 ATPase, F1 complex, delta/epsilon subunit 0.71 0.31 -0.31
67 AT2G25690 Protein of unknown function (DUF581) -0.7 0.35 -0.32
68 AT2G21160 Translocon-associated protein (TRAP), alpha subunit 0.7 0.32 -0.32
69 AT3G04780 Protein of unknown function (DUF1000) 0.7 0.31 -0.33
70 AT3G24790 Protein kinase superfamily protein -0.7 0.31 -0.3
71 AT4G31080 Protein of unknown function (DUF2296) 0.69 0.32 -0.34
72 AT1G48900 Signal recognition particle, SRP54 subunit protein 0.69 0.31 -0.32
73 AT1G76670 Nucleotide-sugar transporter family protein 0.69 0.31 -0.33
74 AT1G16030 heat shock protein 70B heat shock protein 70B -0.69 0.33 -0.33
75 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.69 0.33 -0.32
76 AT2G19550 alpha/beta-Hydrolases superfamily protein -0.69 0.3 -0.34
77 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.35 -0.29
78 AT3G08910 DNAJ heat shock family protein 0.69 0.32 -0.33
79 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.69 0.31 -0.32
80 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 -0.69 0.33 -0.32
81 AT1G52730 Transducin/WD40 repeat-like superfamily protein 0.69 0.29 -0.32
82 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.69 0.33 -0.31
83 AT3G05280 Integral membrane Yip1 family protein 0.69 0.32 -0.32
84 AT1G24170 Nucleotide-diphospho-sugar transferases superfamily protein GALACTURONOSYLTRANSFERASE-LIKE 8,
LGT9		 0.69 0.31 -0.3
85 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 -0.66 0.33 -0.31
86 AT1G24600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits
to 18 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.32
87 AT3G57980 DNA-binding bromodomain-containing protein -0.65 0.32 -0.33
88 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.65 0.32 -0.31
89 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.65 0.31 -0.3
90 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 -0.64 0.32 -0.32
91 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 -0.64 0.29 -0.31
92 AT4G04150 transposable element gene -0.63 0.31 -0.32
93 AT4G09360 NB-ARC domain-containing disease resistance protein -0.63 0.33 -0.32
94 AT5G55010 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.34 -0.33
95 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 -0.62 0.32 -0.31
96 AT1G63560 Receptor-like protein kinase-related family protein -0.62 0.32 -0.32
97 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.62 0.31 -0.32
98 AT4G20490 transposable element gene -0.62 0.31 -0.32
99 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.61 0.29 -0.33
100 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.61 0.32 -0.34
101 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.61 0.32 -0.3
102 AT5G52390 PAR1 protein -0.61 0.31 -0.3
103 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.3 -0.32
104 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 -0.6 0.31 -0.31
105 AT2G10050 transposable element gene -0.58 0.3 -0.31
106 AT5G55950 Nucleotide/sugar transporter family protein -0.58 0.3 -0.31
107 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 -0.58 0.32 -0.29
108 AT5G49290 receptor like protein 56 receptor like protein 56, receptor
like protein 56		 -0.57 0.32 -0.29
109 AT4G25800 Calmodulin-binding protein -0.57 0.32 -0.3
110 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.34 -0.29
111 AT2G41690 heat shock transcription factor B3 heat shock transcription factor
B3, HEAT SHOCK TRANSCRIPTION
FACTOR B3, heat shock
transcription factor B3		 -0.57 0.33 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0216 Proline L-Proline L-Proline proline degradation II,
arginine degradation VI (arginase 2 pathway),
L-Ndelta-acetylornithine biosynthesis,
tRNA charging,
citrulline biosynthesis,
proline biosynthesis III 		-0.63 0.33 -0.34 C0216