AT5G09860 : AtHPR1
Query Information
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AGICode AT5G09860
Description nuclear matrix protein-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G09860 nuclear matrix protein-related AtHPR1, AtTHO1, HPR1, THO1 1 0.32 -0.32
2 AT4G13990 Exostosin family protein 0.78 0.33 -0.32
3 AT4G02060 Minichromosome maintenance (MCM2/3/5) family protein MCM7, PROLIFERA 0.76 0.32 -0.28
4 AT5G15760 Ribosomal protein PSRP-3/Ycf65 0.76 0.31 -0.33
5 AT5G43020 Leucine-rich repeat protein kinase family protein 0.75 0.31 -0.3
6 AT4G01610 Cysteine proteinases superfamily protein -0.74 0.3 -0.3
7 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.74 0.31 -0.32
8 AT3G11100 sequence-specific DNA binding transcription factors -0.74 0.32 -0.31
9 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.3 -0.31
10 AT5G13480 Transducin/WD40 repeat-like superfamily protein FY 0.73 0.31 -0.32
11 AT2G05630 Ubiquitin-like superfamily protein ATG8D -0.73 0.31 -0.32
12 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.73 0.3 -0.29
13 AT5G37020 auxin response factor 8 auxin response factor 8, ATARF8 0.72 0.3 -0.31
14 AT2G22690 zinc ion binding -0.72 0.28 -0.29
15 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.33 -0.31
16 AT5G58375 Methyltransferase-related protein -0.72 0.32 -0.32
17 AT4G02680 ETO1-like 1 ETO1-like 1 0.72 0.31 -0.31
18 AT5G06370 NC domain-containing protein-related -0.72 0.32 -0.32
19 AT4G38050 Xanthine/uracil permease family protein 0.72 0.33 -0.3
20 AT1G08840 DNA replication helicase, putative embryo defective 2411 0.71 0.32 -0.31
21 AT2G48090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: male gametophyte, root, flower,
carpel; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.71 0.31 -0.3
22 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 0.71 0.32 -0.32
23 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 -0.71 0.31 -0.32
24 AT5G27620 cyclin H;1 cyclin H;1 0.71 0.32 -0.32
25 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.71 0.31 -0.31
26 AT2G33150 peroxisomal 3-ketoacyl-CoA thiolase 3 3-KETOACYL-COA THIOLASE 2,
PEROXISOME DEFECTIVE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 3		 -0.71 0.3 -0.31
27 AT1G01370 Histone superfamily protein CENTROMERIC HISTONE H3, HTR12 0.7 0.33 -0.31
28 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.29 -0.33
29 AT2G16440 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 4 0.7 0.33 -0.34
30 AT1G57820 Zinc finger (C3HC4-type RING finger) family protein ORTHRUS 2, VARIANT IN METHYLATION
1		 0.7 0.33 -0.31
31 AT3G49660 Transducin/WD40 repeat-like superfamily protein AtWDR5a, human WDR5 (WD40 repeat)
homolog a		 0.7 0.32 -0.3
32 AT1G25400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G68440.1); Has 21 Blast hits
to 21 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.32 -0.32
33 AT4G34390 extra-large GTP-binding protein 2 extra-large GTP-binding protein 2 -0.69 0.32 -0.32
34 AT1G67630 DNA polymerase alpha 2 EMBRYO DEFECTIVE 2814, DNA
polymerase alpha 2		 0.69 0.33 -0.33
35 AT3G23490 cyanase cyanase -0.69 0.3 -0.29
36 AT2G40110 Yippee family putative zinc-binding protein -0.69 0.32 -0.3
37 AT4G12410 SAUR-like auxin-responsive protein family -0.69 0.32 -0.32
38 AT2G35510 similar to RCD one 1 similar to RCD one 1 0.69 0.33 -0.31
39 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 0.69 0.31 -0.28
40 AT5G44530 Subtilase family protein 0.69 0.29 -0.31
41 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.69 0.32 -0.3
42 AT4G28990 RNA-binding protein-related 0.68 0.33 -0.31
43 AT3G44600 cyclophilin71 AtCYP71, cyclophilin 71 0.68 0.31 -0.31
44 AT2G31010 Protein kinase superfamily protein 0.68 0.32 -0.32
45 AT1G18150 Protein kinase superfamily protein ATMPK8, MPK8 0.68 0.34 -0.33
46 AT3G17940 Galactose mutarotase-like superfamily protein -0.68 0.3 -0.31
47 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein -0.68 0.31 -0.32
48 AT4G14430 indole-3-butyric acid response 10 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 2,
ENOYL-COA HYDRATASE/ISOMERASE B,
DELTA(3), DELTA(2)-ENOYL COA
ISOMERASE 2, indole-3-butyric acid
response 10, PEC12		 -0.68 0.31 -0.31
49 AT5G07690 myb domain protein 29 myb domain protein 29, myb domain
protein 29, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 2		 0.68 0.32 -0.32
50 AT5G34800 transposable element gene 0.68 0.35 -0.3
51 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 0.67 0.32 -0.34
52 AT2G01540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.67 0.32 -0.31
53 AT5G34930 arogenate dehydrogenase -0.67 0.31 -0.32
54 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 -0.67 0.32 -0.29
55 AT4G29160 SNF7 family protein SNF7.1 -0.66 0.33 -0.31
56 AT3G61400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.31 -0.31
57 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1		 0.66 0.33 -0.32
58 AT4G30500 Protein of unknown function (DUF788) -0.66 0.34 -0.32
59 AT2G31650 homologue of trithorax homologue of trithorax, SET DOMAIN
PROTEIN 27		 0.66 0.34 -0.32
60 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.31 -0.32
61 AT3G05200 RING/U-box superfamily protein ATL6 -0.65 0.31 -0.32
62 AT5G60150 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.34 -0.3
63 AT3G54380 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3C, yeast Sac3 homolog C -0.65 0.29 -0.31
64 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 -0.65 0.32 -0.33
65 AT5G39960 GTP binding;GTP binding 0.65 0.32 -0.32
66 AT5G20980 methionine synthase 3 methionine synthase 3, methionine
synthase 3		 0.65 0.31 -0.31
67 AT1G09140 SERINE-ARGININE PROTEIN 30 Serine/Arginine-Rich Protein
Splicing Factor 30,
SERINE-ARGININE PROTEIN 30,
ATSRP30.1, ATSRP30.2,
Serine/Arginine-Rich Protein
Splicing Factor 30		 -0.65 0.31 -0.3
68 AT1G27880 DEAD/DEAH box RNA helicase family protein 0.65 0.31 -0.33
69 AT4G15955 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.29
70 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.65 0.32 -0.3
71 AT1G73100 SU(VAR)3-9 homolog 3 SET DOMAIN PROTEIN 19, SU(VAR)3-9
homolog 3		 0.64 0.31 -0.34
72 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.64 0.31 -0.32
73 AT1G20910 ARID/BRIGHT DNA-binding domain-containing protein 0.64 0.3 -0.31
74 AT5G65110 acyl-CoA oxidase 2 acyl-CoA oxidase 2, ATACX2 -0.64 0.31 -0.32
75 AT3G17030 Nucleic acid-binding proteins superfamily 0.64 0.3 -0.33
76 AT1G75490 Integrase-type DNA-binding superfamily protein -0.64 0.33 -0.32
77 AT3G13430 RING/U-box superfamily protein -0.64 0.3 -0.33
78 AT1G22040 Galactose oxidase/kelch repeat superfamily protein -0.64 0.3 -0.31
79 AT1G19340 Methyltransferase MT-A70 family protein 0.64 0.31 -0.31
80 AT3G15070 RING/U-box superfamily protein -0.64 0.33 -0.3
81 AT4G15430 ERD (early-responsive to dehydration stress) family protein 0.64 0.33 -0.34
82 AT1G50600 scarecrow-like 5 scarecrow-like 5 -0.64 0.31 -0.35
83 AT1G77720 putative protein kinase 1 putative protein kinase 1 0.64 0.33 -0.3
84 AT5G64190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40390.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.34 -0.31
85 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein -0.64 0.33 -0.32
86 AT1G11050 Protein kinase superfamily protein -0.64 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0164 MST_1596.8 - - - -0.75 0.46 -0.45
88 C0160 MST_1509.5 - - - -0.71 0.48 -0.45
89 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - -0.7 0.48 -0.45 C0023
90 C0165 MST_1688.6 - - - -0.69 0.46 -0.48
91 C0163 MST_1589.2 - - - -0.68 0.45 -0.44
92 C0161 MST_1566.3 - - - -0.64 0.44 -0.44