AT5G10140 : AGAMOUS-like 25
Query Information
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AGICode AT5G10140
Description K-box region and MADS-box transcription factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 1 0.29 -0.32
2 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 -0.67 0.31 -0.33
3 AT5G25070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.33 -0.34
4 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.67 0.31 -0.32
5 AT4G24390 RNI-like superfamily protein auxin signaling F-box 4 0.65 0.3 -0.3
6 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 0.65 0.3 -0.3
7 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 0.63 0.33 -0.34
8 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 0.63 0.32 -0.34
9 AT5G65470 O-fucosyltransferase family protein 0.62 0.31 -0.3
10 AT1G74320 Protein kinase superfamily protein 0.62 0.31 -0.32
11 AT4G26770 Phosphatidate cytidylyltransferase family protein -0.61 0.3 -0.33
12 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.6 0.33 -0.33
13 AT5G25380 cyclin a2;1 cyclin a2;1 0.6 0.31 -0.33
14 AT1G67880 beta-1,4-N-acetylglucosaminyltransferase family protein 0.59 0.3 -0.31
15 ATMG01370 hypothetical protein ORF111D -0.59 0.31 -0.31
16 AT5G23330 Nucleotidylyl transferase superfamily protein 0.59 0.32 -0.33
17 AT5G03200 RING/U-box superfamily protein 0.59 0.32 -0.32
18 AT4G07820 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.58 0.32 -0.3
19 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.58 0.32 -0.33
20 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.58 0.31 -0.31
21 AT2G45840 Arabidopsis thaliana protein of unknown function (DUF821) -0.57 0.29 -0.3
22 AT5G22410 root hair specific 18 root hair specific 18 -0.57 0.32 -0.31
23 AT5G50130 NAD(P)-binding Rossmann-fold superfamily protein 0.57 0.33 -0.32
24 AT1G04180 YUCCA 9 YUCCA 9 -0.57 0.31 -0.32
25 AT5G41400 RING/U-box superfamily protein 0.57 0.34 -0.31
26 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.32 -0.3
27 AT4G27050 F-box/RNI-like superfamily protein -0.57 0.31 -0.31
28 AT5G49320 Protein of unknown function (DUF1218) -0.56 0.31 -0.31
29 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 0.56 0.28 -0.32
30 AT2G30470 high-level expression of sugar-inducible gene 2 high-level expression of
sugar-inducible gene 2,
VP1/ABI3-LIKE 1		 -0.56 0.31 -0.29
31 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.56 0.29 -0.32
32 AT4G29540 bacterial transferase hexapeptide repeat-containing protein AtLpxA, LpxA 0.56 0.31 -0.33
33 AT4G07780 transposable element gene 0.56 0.3 -0.31
34 AT5G48550 F-box associated ubiquitination effector family protein 0.56 0.32 -0.32
35 AT1G51920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED
DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.32 -0.32
36 AT1G48820 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.55 0.31 -0.32
37 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.55 0.31 -0.3
38 AT4G23030 MATE efflux family protein -0.54 0.32 -0.32
39 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 0.54 0.32 -0.32
40 AT5G34460 transposable element gene 0.54 0.3 -0.31
41 AT4G35090 catalase 2 catalase 2 0.54 0.33 -0.31
42 AT1G51460 ABC-2 type transporter family protein ATP-binding cassette G13 0.54 0.33 -0.32
43 AT1G35647 transposable element gene 0.54 0.32 -0.31
44 AT4G09760 Protein kinase superfamily protein 0.54 0.31 -0.31
45 AT5G14340 myb domain protein 40 myb domain protein 40, myb domain
protein 40		 -0.54 0.32 -0.32
46 AT2G03450 purple acid phosphatase 9 PURPLE ACID PHOSPHATASE 9, purple
acid phosphatase 9		 -0.54 0.31 -0.31
47 AT3G49310 Major facilitator superfamily protein -0.53 0.32 -0.3
48 AT2G28100 alpha-L-fucosidase 1 alpha-L-fucosidase 1,
alpha-L-fucosidase 1		 -0.53 0.29 -0.35
49 AT3G27410 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.32 -0.32
50 AT5G04640 AGAMOUS-like 99 AGAMOUS-like 99 -0.52 0.31 -0.32
51 AT2G44110 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 15,
MILDEW RESISTANCE LOCUS O 15		 -0.51 0.31 -0.34
52 AT4G36890 Nucleotide-diphospho-sugar transferases superfamily protein irregular xylem 14 -0.51 0.3 -0.29
53 AT5G45230 Disease resistance protein (TIR-NBS-LRR class) family 0.51 0.31 -0.33
54 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 -0.51 0.31 -0.32
55 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 0.51 0.32 -0.3
56 AT3G21680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root, flower,
stamen; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 34 Blast hits to 34 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.51 0.31 -0.32
57 AT3G03570 Protein of unknown function (DUF3550/UPF0682) -0.51 0.3 -0.34
58 AT3G43990 Bromo-adjacent homology (BAH) domain-containing protein 0.51 0.31 -0.33
59 AT2G31160 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 3,
ORGAN BOUNDARY 1		 0.5 0.3 -0.33
60 AT5G05700 arginine-tRNA protein transferase 1 ATATE1, arginine-tRNA protein
transferase 1, DELAYED LEAF
SENESCENCE 1		 -0.5 0.31 -0.31
61 AT2G02120 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
70, PDF2.1		 0.5 0.34 -0.32
62 AT4G34640 squalene synthase 1 ERG9, squalene synthase 1 -0.5 0.32 -0.33
63 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.5 0.32 -0.34
64 AT5G22875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.5 0.31 -0.32
65 AT2G38150 alpha 1,4-glycosyltransferase family protein 0.49 0.31 -0.31
66 AT2G42860 unknown protein; Has 446 Blast hits to 326 proteins in 94
species: Archae - 0; Bacteria - 32; Metazoa - 113; Fungi -
93; Plants - 21; Viruses - 4; Other Eukaryotes - 183
(source: NCBI BLink).		 0.49 0.32 -0.29
67 AT3G18650 AGAMOUS-like 103 AGAMOUS-like 103 -0.49 0.33 -0.31
68 AT5G38195 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.49 0.29 -0.33
69 ATMG00130 hypothetical protein ORF121A -0.49 0.33 -0.3
70 AT4G10560 Cysteine/Histidine-rich C1 domain family protein maternal effect embryo arrest 53 -0.49 0.35 -0.33
71 AT5G03690 Aldolase superfamily protein -0.49 0.32 -0.31
72 AT3G02440 TRICHOME BIREFRINGENCE-LIKE 20 TRICHOME BIREFRINGENCE-LIKE 20 0.48 0.33 -0.32
73 AT3G25810 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.48 0.32 -0.31
74 AT2G18270 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.32 -0.32
75 AT2G24190 NAD(P)-binding Rossmann-fold superfamily protein short-chain
dehydrogenase/reductase 2		 0.48 0.32 -0.31
76 AT4G04440 transposable element gene 0.48 0.33 -0.32
77 AT5G45260 Disease resistance protein (TIR-NBS-LRR class) ARABIDOPSIS THALIANA WRKY DOMAIN
PROTEIN 52, RESISTANT TO RALSTONIA
SOLANACEARUM 1, SENSITIVE TO LOW
HUMIDITY 1		 -0.47 0.31 -0.29
78 AT2G38500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.47 0.31 -0.31
79 AT2G19320 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.47 0.34 -0.33
80 AT5G14560 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.47 0.32 -0.28
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.82 0.44 -0.47 C0033
82 C0117 Hydroxyproline (2S,4R)-Hydroxyproline 4-Hydroxy-L-proline protein precursor -0.59 0.46 -0.47 C0117
83 C0211 PR_MST_2158.8 - - - 0.58 0.42 -0.44
84 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		-0.55 0.31 -0.3 C0069
85 C0060 Asparagine D,L-Asparagine L-Asparagine asparagine degradation I,
asparagine biosynthesis III (tRNA-dependent),
asparagine biosynthesis I,
tRNA charging,
cyanide detoxification II 		-0.53 0.32 -0.32 C0060
86 C0112 Histidine L-Histidine L-Histidine tRNA charging,
histidine biosynthesis 		-0.51 0.32 -0.31 C0112
87 C0101 Glutamic acid D,L-Glutamic acid L-Glutamate; D-Glutamate tyrosine biosynthesis I,
serine biosynthesis,
tyrosine degradation I,
uridine-5'-phosphate biosynthesis,
proline biosynthesis III,
glutamate biosynthesis V,
glycine biosynthesis,
lysine biosynthesis VI,
leucine biosynthesis,
UDP-N-acetyl-D-glucosamine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle (plant pathway),
L-Ndelta-acetylornithine biosynthesis,
tryptophan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
4-hydroxyphenylpyruvate biosynthesis,
proline degradation II,
photorespiration,
5-aminoimidazole ribonucleotide biosynthesis I,
folate polyglutamylation,
ammonia assimilation cycle II,
arginine degradation VI (arginase 2 pathway),
asparagine biosynthesis III (tRNA-dependent),
tetrahydrofolate biosynthesis II,
glutamine biosynthesis III,
valine degradation I,
glucosinolate biosynthesis from dihomomethionine,
phenylalanine biosynthesis II,
citrulline biosynthesis,
gamma-glutamyl cycle,
indole-3-acetyl-amino acid biosynthesis,
purine nucleotides de novo biosynthesis II,
IAA biosynthesis I,
NAD biosynthesis I (from aspartate),
alanine biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
glucosinolate biosynthesis from homomethionine,
phenylalanine degradation III,
ornithine biosynthesis,
glutathione-mediated detoxification II,
pyrimidine ribonucleotides interconversion,
indole glucosinolate breakdown (active in intact plant cell),
aspartate degradation II,
glucosinolate biosynthesis from trihomomethionine,
glucosinolate biosynthesis from tetrahomomethionine,
L-glutamine biosynthesis II (tRNA-dependent),
camalexin biosynthesis,
glutathione biosynthesis,
aspartate biosynthesis,
leucine degradation I,
glutathione degradation,
pyridine nucleotide cycling (plants),
glutamate degradation I,
valine biosynthesis,
glucosinolate biosynthesis from tryptophan,
arginine biosynthesis II (acetyl cycle),
isoleucine biosynthesis I (from threonine),
arginine biosynthesis I,
arginine degradation I (arginase pathway),
glucosinolate biosynthesis from hexahomomethionine,
tetrapyrrole biosynthesis I,
alanine degradation III,
pyridoxal 5'-phosphate biosynthesis II,
glutamate biosynthesis IV,
glutamate degradation IV,
asparagine biosynthesis I,
histidine biosynthesis,
lysine degradation II,
pantothenate biosynthesis,
isoleucine degradation I,
folate polyglutamylation II,
glutamine biosynthesis I,
glucosinolate biosynthesis from phenylalanine,
tyrosine biosynthesis II,
nitrate reduction II (assimilatory),
alanine degradation II (to D-lactate) 		-0.51 0.3 -0.31 C0101