AT5G08600 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G08600
Description U3 ribonucleoprotein (Utp) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G08600 U3 ribonucleoprotein (Utp) family protein 1 0.31 -0.33
2 AT5G02610 Ribosomal L29 family protein 0.77 0.31 -0.34
3 AT2G20740 Tetraspanin family protein -0.75 0.31 -0.31
4 AT4G38010 Pentatricopeptide repeat (PPR-like) superfamily protein 0.72 0.33 -0.3
5 AT5G27280 Zim17-type zinc finger protein -0.72 0.32 -0.32
6 AT3G61100 Putative endonuclease or glycosyl hydrolase 0.7 0.31 -0.32
7 AT5G39960 GTP binding;GTP binding 0.7 0.3 -0.29
8 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.7 0.31 -0.31
9 AT1G17790 DNA-binding bromodomain-containing protein -0.7 0.33 -0.3
10 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.69 0.32 -0.3
11 AT5G27990 Pre-rRNA-processing protein TSR2, conserved region 0.69 0.32 -0.3
12 AT5G05230 RING/U-box superfamily protein -0.68 0.34 -0.32
13 AT5G26180 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.68 0.33 -0.31
14 AT2G24450 FASCICLIN-like arabinogalactan protein 3 precursor FASCICLIN-like arabinogalactan
protein 3 precursor		 0.67 0.32 -0.32
15 AT5G13640 phospholipid:diacylglycerol acyltransferase ARABIDOPSIS THALIANA
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE,
phospholipid:diacylglycerol
acyltransferase,
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE 1		 -0.67 0.32 -0.31
16 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.3
17 AT3G27530 golgin candidate 6 golgin candidate 6, MAIGO 4 -0.67 0.33 -0.32
18 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.67 0.31 -0.32
19 AT3G57800 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.66 0.31 -0.32
20 AT5G66050 Wound-responsive family protein -0.66 0.32 -0.28
21 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 -0.65 0.28 -0.3
22 AT1G16830 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.33 -0.31
23 AT5G02350 Cysteine/Histidine-rich C1 domain family protein 0.65 0.3 -0.31
24 AT3G47160 RING/U-box superfamily protein -0.65 0.34 -0.31
25 AT3G52460 hydroxyproline-rich glycoprotein family protein 0.65 0.29 -0.33
26 AT3G27000 actin related protein 2 actin related protein 2, ACTIN
RELATED PROTEIN 2, WURM		 -0.65 0.31 -0.32
27 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 -0.64 0.32 -0.3
28 AT2G30120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits
to 241 proteins in 42 species: Archae - 4; Bacteria - 15;
Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink).		 -0.64 0.31 -0.33
29 AT3G57900 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.31 -0.31
30 AT2G02760 ubiquiting-conjugating enzyme 2 ubiquiting-conjugating enzyme 2,
ubiquitin-conjugating enzyme 2,
ubiquiting-conjugating enzyme 2		 -0.64 0.32 -0.32
31 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.64 0.3 -0.32
32 AT5G65090 DNAse I-like superfamily protein BRISTLED 1, DEFORMED ROOT HAIRS 4,
MRH3		 0.63 0.33 -0.34
33 AT2G19350 Eukaryotic protein of unknown function (DUF872) -0.63 0.29 -0.3
34 AT5G07660 structural maintenance of chromosomes 6A structural maintenance of
chromosomes 6A		 -0.63 0.33 -0.33
35 AT5G49840 ATP-dependent Clp protease -0.63 0.3 -0.33
36 AT1G65720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.63 0.32 -0.3
37 AT4G10970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.32 -0.35
38 AT5G37630 ARM repeat superfamily protein EMBRYO DEFECTIVE 2656 0.63 0.31 -0.32
39 AT2G26110 Protein of unknown function (DUF761) -0.63 0.32 -0.32
40 AT5G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G19990.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.32 -0.29
41 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.63 0.32 -0.32
42 AT2G17350 unknown protein; Has 119 Blast hits to 93 proteins in 40
species: Archae - 0; Bacteria - 3; Metazoa - 18; Fungi -
12; Plants - 44; Viruses - 0; Other Eukaryotes - 42
(source: NCBI BLink).		 -0.62 0.31 -0.33
43 AT1G28375 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.62 0.29 -0.34
44 AT5G06440 BEST Arabidopsis thaliana protein match is: Polyketide
cyclase/dehydrase and lipid transport superfamily protein
(TAIR:AT3G11720.3); Has 155 Blast hits to 153 proteins in
39 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi -
6; Plants - 101; Viruses - 0; Other Eukaryotes - 39
(source: NCBI BLink).		 -0.62 0.31 -0.32
45 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 0.62 0.32 -0.33
46 AT2G40810 homolog of yeast autophagy 18C homolog of yeast autophagy 18C,
homolog of yeast autophagy 18C		 -0.61 0.3 -0.31
47 AT4G31820 Phototropic-responsive NPH3 family protein ENHANCER OF PINOID, MACCHI-BOU 4,
NAKED PINS IN YUC MUTANTS 1		 -0.61 0.31 -0.32
48 AT5G40830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.6 0.31 -0.31
49 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 -0.6 0.32 -0.3
50 AT5G03090 BEST Arabidopsis thaliana protein match is: mto 1
responding down 1 (TAIR:AT1G53480.1); Has 7 Blast hits to 7
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.59 0.34 -0.33
51 AT1G66620 Protein with RING/U-box and TRAF-like domains 0.59 0.3 -0.31
52 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 0.59 0.32 -0.34
53 AT3G52690 RNI-like superfamily protein 0.59 0.33 -0.3
54 AT1G69340 appr-1-p processing enzyme family protein -0.59 0.3 -0.32
55 AT4G04110 Toll-Interleukin-Resistance (TIR) domain family protein 0.59 0.31 -0.31
56 AT3G51250 Senescence/dehydration-associated protein-related -0.58 0.32 -0.34
57 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 -0.58 0.27 -0.34
58 AT3G56820 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.58 0.33 -0.31
59 AT5G15710 Galactose oxidase/kelch repeat superfamily protein -0.58 0.33 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
60 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.78 0.44 -0.47 C0120