AT5G07900 : -
Query Information
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AGICode AT5G07900
Description Mitochondrial transcription termination factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G07900 Mitochondrial transcription termination factor family
protein		 1 0.32 -0.32
2 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.94 0.33 -0.33
3 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.93 0.32 -0.3
4 AT1G56050 GTP-binding protein-related 0.91 0.29 -0.3
5 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.91 0.3 -0.29
6 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.91 0.32 -0.31
7 AT5G63050 embryo defective 2759 embryo defective 2759 0.91 0.31 -0.31
8 AT4G36390 Methylthiotransferase 0.9 0.32 -0.32
9 AT4G26370 antitermination NusB domain-containing protein 0.9 0.32 -0.3
10 AT3G21300 RNA methyltransferase family protein 0.9 0.33 -0.3
11 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.9 0.31 -0.31
12 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.9 0.3 -0.33
13 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.9 0.29 -0.31
14 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.89 0.32 -0.31
15 AT1G21600 plastid transcriptionally active 6 plastid transcriptionally active 6 0.89 0.3 -0.32
16 AT2G21860 violaxanthin de-epoxidase-related 0.89 0.33 -0.34
17 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.89 0.29 -0.31
18 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.89 0.32 -0.31
19 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.89 0.32 -0.33
20 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.89 0.3 -0.33
21 AT1G06190 Rho termination factor 0.88 0.3 -0.31
22 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.88 0.31 -0.29
23 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.88 0.3 -0.32
24 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.88 0.3 -0.3
25 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.88 0.34 -0.32
26 AT2G14880 SWIB/MDM2 domain superfamily protein 0.88 0.31 -0.32
27 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.88 0.3 -0.34
28 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C 0.88 0.32 -0.32
29 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.88 0.32 -0.31
30 AT4G25990 CCT motif family protein CIL 0.88 0.31 -0.31
31 AT2G39670 Radical SAM superfamily protein 0.88 0.33 -0.34
32 AT3G17170 Translation elongation factor EF1B/ribosomal protein S6
family protein		 REGULATOR OF FATTY-ACID
COMPOSITION 3		 0.87 0.31 -0.36
33 AT3G52380 chloroplast RNA-binding protein 33 chloroplast RNA-binding protein
33, PIGMENT DEFECTIVE 322		 0.87 0.3 -0.31
34 AT3G09210 plastid transcriptionally active 13 plastid transcriptionally active
13		 0.87 0.3 -0.31
35 AT5G48630 Cyclin family protein 0.87 0.29 -0.33
36 AT3G22960 Pyruvate kinase family protein PKP-ALPHA, PLASTIDIAL PYRUVATE
KINASE 1		 0.87 0.32 -0.32
37 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.87 0.32 -0.32
38 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.87 0.32 -0.32
39 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.3 -0.33
40 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.87 0.3 -0.3
41 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.87 0.32 -0.31
42 AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase 0.87 0.29 -0.31
43 AT1G15690 Inorganic H pyrophosphatase family protein ARABIDOPSIS THALIANA V-PPASE 3,
AtVHP1;1, AVP-3, AVP1, FUGU 5		 0.86 0.31 -0.29
44 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.86 0.33 -0.31
45 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.86 0.3 -0.31
46 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.3 -0.3
47 AT2G04530 Metallo-hydrolase/oxidoreductase superfamily protein CPZ, TRNASE Z 2 0.86 0.33 -0.32
48 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.86 0.31 -0.3
49 AT2G40760 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.85 0.29 -0.31
50 AT4G39120 myo-inositol monophosphatase like 2 HISTIDINE BIOSYNTHESIS 7,
myo-inositol monophosphatase like
2		 0.85 0.31 -0.32
51 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.85 0.32 -0.33
52 AT5G50280 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1006 0.85 0.32 -0.34
53 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.85 0.31 -0.33
54 AT5G45820 CBL-interacting protein kinase 20 CBL-interacting protein kinase 20,
PROTEIN KINASE 18, SNF1-RELATED
PROTEIN KINASE 3.6		 0.84 0.29 -0.33
55 AT3G61780 embryo defective 1703 embryo defective 1703 0.84 0.31 -0.31
56 AT5G09240 ssDNA-binding transcriptional regulator 0.84 0.34 -0.31
57 AT1G18090 5'-3' exonuclease family protein 0.84 0.31 -0.31
58 AT3G51870 Mitochondrial substrate carrier family protein 0.83 0.3 -0.3
59 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.83 0.32 -0.33
60 AT5G19750 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.83 0.32 -0.3
61 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 0.83 0.34 -0.33
62 AT3G28040 Leucine-rich receptor-like protein kinase family protein 0.83 0.31 -0.33
63 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.83 0.31 -0.33
64 AT4G26670 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.83 0.31 -0.31
65 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.83 0.32 -0.34
66 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.83 0.32 -0.31
67 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.83 0.32 -0.32
68 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.83 0.3 -0.31
69 AT5G23070 Thymidine kinase 0.83 0.32 -0.32
70 AT5G42480 Chaperone DnaJ-domain superfamily protein ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 6		 0.82 0.32 -0.31
71 AT5G42130 Mitochondrial substrate carrier family protein AtMfl1, MitoFerrinLike1 0.82 0.31 -0.29
72 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.82 0.32 -0.34
73 AT1G70730 Phosphoglucomutase/phosphomannomutase family protein phosphoglucomutase 2 0.82 0.33 -0.31
74 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.82 0.31 -0.32
75 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.82 0.32 -0.32
76 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.33 -0.31
77 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.82 0.31 -0.32
78 AT4G26060 Ribosomal protein L18ae family -0.81 0.3 -0.32
79 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.8 0.31 -0.31
80 AT5G42050 DCD (Development and Cell Death) domain protein -0.8 0.31 -0.32
81 AT5G03490 UDP-Glycosyltransferase superfamily protein -0.79 0.34 -0.31
82 AT2G18480 Major facilitator superfamily protein -0.79 0.32 -0.32
83 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.79 0.32 -0.33
84 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.78 0.33 -0.3
85 AT1G74410 RING/U-box superfamily protein -0.77 0.3 -0.31
86 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 -0.77 0.32 -0.31
87 AT4G31860 Protein phosphatase 2C family protein -0.77 0.32 -0.31
88 AT3G14620 cytochrome P450, family 72, subfamily A, polypeptide 8 cytochrome P450, family 72,
subfamily A, polypeptide 8		 -0.77 0.32 -0.33
89 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 -0.76 0.32 -0.3
90 AT4G22920 non-yellowing 1 NON-YELLOWING 1, NON-YELLOWING 1 -0.76 0.3 -0.33
91 AT4G33780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40
Blast hits to 40 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.33 -0.3
92 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.76 0.32 -0.31
93 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.76 0.32 -0.3
94 AT1G77920 bZIP transcription factor family protein -0.75 0.31 -0.33
95 AT3G25010 receptor like protein 41 receptor like protein 41, receptor
like protein 41		 -0.75 0.3 -0.32
96 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.75 0.3 -0.32
97 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.75 0.3 -0.32
98 AT2G02370 SNARE associated Golgi protein family -0.75 0.32 -0.3
99 AT2G40270 Protein kinase family protein -0.75 0.31 -0.31
100 AT5G66250 kinectin-related -0.74 0.33 -0.32
101 AT5G66650 Protein of unknown function (DUF607) -0.74 0.32 -0.3
102 AT2G40110 Yippee family putative zinc-binding protein -0.74 0.32 -0.31
103 AT5G47070 Protein kinase superfamily protein -0.74 0.32 -0.3
104 AT1G24440 RING/U-box superfamily protein -0.74 0.3 -0.31
105 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.73 0.29 -0.32
106 AT1G78280 transferases, transferring glycosyl groups -0.73 0.33 -0.31
107 AT4G37290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED
DURING: LP.04 four leaves visible; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.31 -0.3
108 AT4G33940 RING/U-box superfamily protein -0.72 0.34 -0.32
109 AT5G38895 RING/U-box superfamily protein -0.72 0.33 -0.32
110 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.71 0.3 -0.31
111 AT3G26600 armadillo repeat only 4 armadillo repeat only 4 -0.71 0.31 -0.3
112 AT3G11100 sequence-specific DNA binding transcription factors -0.71 0.31 -0.32
113 AT3G05290 peroxisomal adenine nucleotide carrier 1 AtPNC1, peroxisomal adenine
nucleotide carrier 1		 -0.71 0.31 -0.34
114 AT5G10730 NAD(P)-binding Rossmann-fold superfamily protein -0.71 0.31 -0.33
115 AT5G37540 Eukaryotic aspartyl protease family protein -0.71 0.3 -0.31
116 AT3G47340 glutamine-dependent asparagine synthase 1 glutamine-dependent asparagine
synthase 1, ARABIDOPSIS THALIANA
GLUTAMINE-DEPENDENT ASPARAGINE
SYNTHASE 1, DARK INDUCIBLE 6		 -0.7 0.31 -0.34
117 AT5G10695 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.7 0.3 -0.31
118 AT1G19640 jasmonic acid carboxyl methyltransferase jasmonic acid carboxyl
methyltransferase		 -0.7 0.31 -0.31
119 AT2G22300 signal responsive 1 CALMODULIN-BINDING TRANSCRIPTION
ACTIVATOR 3, signal responsive 1		 -0.7 0.3 -0.3
120 AT2G43290 Calcium-binding EF-hand family protein multicopy suppressors of snf4
deficiency in yeast 3		 -0.7 0.32 -0.31
121 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 -0.7 0.31 -0.3
122 AT2G32830 phosphate transporter 1;5 phosphate transporter 1;5,
PHOSPHATE TRANSPORTER 5		 -0.7 0.31 -0.31
123 AT2G24040 Low temperature and salt responsive protein family -0.7 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0134 Kaempferol-7-O-neohesperidoside - - - 0.82 0.43 -0.44