AGICode | AT5G07280 |
Description | Leucine-rich repeat transmembrane protein kinase |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G07280 | Leucine-rich repeat transmembrane protein kinase | EXCESS MICROSPOROCYTES1, EXTRA SPOROGENOUS CELLS |
1 | 0.31 | -0.28 | ||
2 | AT1G01040 | dicer-like 1 | ABNORMAL SUSPENSOR 1, DICER-LIKE 1, CARPEL FACTORY, dicer-like 1, EMBRYO DEFECTIVE 60, EMBRYO DEFECTIVE 76, SHORT INTEGUMENTS 1, SUSPENSOR 1 |
0.74 | 0.35 | -0.31 | ||
3 | AT5G65620 | Zincin-like metalloproteases family protein | 0.73 | 0.36 | -0.31 | |||
4 | AT1G55325 | RNA polymerase II transcription mediators | GRAND CENTRAL, MACCHI-BOU 2 | 0.71 | 0.3 | -0.3 | ||
5 | ATCG00770 | ribosomal protein S8 | ribosomal protein S8 | 0.71 | 0.31 | -0.3 | ||
6 | ATCG00750 | ribosomal protein S11 | ribosomal protein S11 | 0.7 | 0.31 | -0.32 | ||
7 | AT1G24706 | THO2 | AtTHO2, EMBRYO DEFECTIVE 2793, THO2 |
0.68 | 0.32 | -0.33 | ||
8 | AT2G17930 | Phosphatidylinositol 3- and 4-kinase family protein with FAT domain |
0.68 | 0.34 | -0.32 | |||
9 | AT2G39340 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3A, yeast Sac3 homolog A | 0.67 | 0.32 | -0.33 | ||
10 | ATCG00760 | ribosomal protein L36 | ribosomal protein L36 | 0.67 | 0.31 | -0.31 | ||
11 | AT1G17440 | Transcription initiation factor TFIID subunit A | CYTOKININ-HYPERSENSITIVE 1, ENHANCED ETHYLENE RESPONSE 4, TBP-ASSOCIATED FACTOR 12B |
0.66 | 0.34 | -0.31 | ||
12 | AT3G11960 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
0.66 | 0.34 | -0.31 | |||
13 | AT1G74030 | enolase 1 | enolase 1 | -0.66 | 0.31 | -0.31 | ||
14 | AT1G58220 | Homeodomain-like superfamily protein | 0.66 | 0.29 | -0.31 | |||
15 | AT3G50590 | Transducin/WD40 repeat-like superfamily protein | 0.65 | 0.32 | -0.3 | |||
16 | AT2G39140 | pseudouridine synthase family protein | PIGMENT DEFECTIVE 328, SUPPRESSOR OF VARIEGATION 1 |
0.65 | 0.3 | -0.35 | ||
17 | AT3G01670 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
sieve element occlusion a | 0.65 | 0.29 | -0.31 | ||
18 | AT4G18130 | phytochrome E | phytochrome E | 0.64 | 0.32 | -0.32 | ||
19 | AT4G29620 | Cytidine/deoxycytidylate deaminase family protein | 0.64 | 0.32 | -0.32 | |||
20 | AT1G77300 | histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) |
ASH1 HOMOLOG 2, CAROTENOID CHLOROPLAST REGULATORY1, EARLY FLOWERING IN SHORT DAYS, LAZARUS 2, SET DOMAIN GROUP 8 |
0.64 | 0.31 | -0.32 | ||
21 | ATCG00780 | ribosomal protein L14 | ribosomal protein L14 | 0.64 | 0.31 | -0.32 | ||
22 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | 0.63 | 0.3 | -0.32 | ||
23 | AT1G24490 | OxaA/YidC-like membrane insertion protein | ALBINA 4, ARABIDOPSIS THALIANA ENVELOPE MEMBRANE INTEGRASE |
0.63 | 0.3 | -0.31 | ||
24 | AT2G36850 | glucan synthase-like 8 | GLUCAN SYNTHASE-LIKE 8, ATGSL8, CHORUS, GSL08, glucan synthase-like 8 |
0.63 | 0.32 | -0.33 | ||
25 | AT5G40340 | Tudor/PWWP/MBT superfamily protein | 0.62 | 0.33 | -0.32 | |||
26 | AT5G11320 | Flavin-binding monooxygenase family protein | YUCCA4 | 0.62 | 0.34 | -0.3 | ||
27 | AT5G16520 | unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.31 | -0.32 | |||
28 | AT5G66320 | GATA transcription factor 5 | GATA transcription factor 5 | 0.62 | 0.31 | -0.3 | ||
29 | AT5G16280 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.62 | 0.32 | -0.34 | |||
30 | AT1G36940 | unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.34 | -0.32 | |||
31 | AT1G48410 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase |
ARGONAUTE 1 | 0.61 | 0.32 | -0.31 | ||
32 | AT2G25850 | poly(A) polymerase 2 | poly(A) polymerase 2 | 0.6 | 0.32 | -0.3 | ||
33 | AT2G45540 | WD-40 repeat family protein / beige-related | 0.6 | 0.32 | -0.32 | |||
34 | AT4G34100 | RING/U-box superfamily protein | 0.6 | 0.32 | -0.31 | |||
35 | AT5G52830 | WRKY DNA-binding protein 27 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 27, WRKY DNA-binding protein 27 |
-0.6 | 0.32 | -0.3 | ||
36 | AT4G27270 | Quinone reductase family protein | -0.6 | 0.3 | -0.33 | |||
37 | AT5G18230 | transcription regulator NOT2/NOT3/NOT5 family protein | 0.6 | 0.32 | -0.31 | |||
38 | AT2G27460 | sec23/sec24 transport family protein | 0.6 | 0.32 | -0.32 | |||
39 | AT3G29760 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.6 | 0.32 | -0.32 | |||
40 | AT1G58230 | binding | 0.6 | 0.33 | -0.31 | |||
41 | AT1G55250 | histone mono-ubiquitination 2 | histone mono-ubiquitination 2 | 0.59 | 0.32 | -0.34 | ||
42 | AT5G38700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.31 | -0.34 | |||
43 | AT1G01960 | SEC7-like guanine nucleotide exchange family protein | embryo sac development arrest 10 | 0.59 | 0.31 | -0.31 | ||
44 | AT1G19610 | Arabidopsis defensin-like protein | LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 |
-0.59 | 0.31 | -0.32 | ||
45 | AT2G31085 | CLAVATA3/ESR-RELATED 6 | AtCLE6, CLAVATA3/ESR-RELATED 6 | -0.59 | 0.33 | -0.3 | ||
46 | AT5G19310 | Homeotic gene regulator | 0.59 | 0.31 | -0.3 | |||
47 | AT1G69830 | alpha-amylase-like 3 | alpha-amylase-like 3, ALPHA-AMYLASE-LIKE 3 |
0.58 | 0.32 | -0.32 | ||
48 | AT4G11110 | SPA1-related 2 | SPA1-related 2 | 0.58 | 0.31 | -0.32 | ||
49 | AT1G55410 | pseudogene, CHP-rich zinc finger protein, putative, similar to putative CHP-rich zinc finger protein GB:CAB77744 GI:7268217 from (Arabidopsis thaliana) |
0.58 | 0.32 | -0.34 | |||
50 | AT5G60100 | pseudo-response regulator 3 | pseudo-response regulator 3, pseudo-response regulator 3 |
0.58 | 0.32 | -0.31 | ||
51 | AT5G27630 | acyl-CoA binding protein 5 | acyl-CoA binding protein 5 | 0.58 | 0.31 | -0.34 | ||
52 | AT5G22760 | PHD finger family protein | 0.58 | 0.32 | -0.3 | |||
53 | AT5G24620 | Pathogenesis-related thaumatin superfamily protein | 0.58 | 0.31 | -0.32 | |||
54 | AT1G04070 | translocase of outer membrane 22-I | ATTOM22-I, translocase of outer membrane 22-I |
-0.58 | 0.33 | -0.33 | ||
55 | AT2G19390 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29790.1); Has 203 Blast hits to 188 proteins in 60 species: Archae - 0; Bacteria - 11; Metazoa - 24; Fungi - 34; Plants - 93; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). |
0.58 | 0.32 | -0.3 | |||
56 | AT5G48720 | x-ray induced transcript 1 | X-RAY INDUCED TRANSCRIPT, X-RAY INDUCED TRANSCRIPT 1 |
-0.58 | 0.33 | -0.3 | ||
57 | AT2G21380 | Kinesin motor family protein | 0.58 | 0.32 | -0.31 | |||
58 | AT3G45960 | expansin-like A3 | expansin-like A3, ATEXPL3, ATHEXP BETA 2.3, expansin-like A3, EXPL3 |
-0.57 | 0.29 | -0.31 | ||
59 | AT2G39850 | Subtilisin-like serine endopeptidase family protein | 0.57 | 0.33 | -0.31 | |||
60 | AT5G58040 | homolog of yeast FIP1 [V] | homolog of yeast FIP1 [V], ATFIPS5, homolog of yeast FIP1 [V], FIPS5 |
0.57 | 0.3 | -0.3 | ||
61 | AT4G14760 | kinase interacting (KIP1-like) family protein | 0.57 | 0.32 | -0.32 | |||
62 | AT4G31730 | glutamine dumper 1 | glutamine dumper 1 | -0.56 | 0.29 | -0.31 | ||
63 | AT3G13650 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.56 | 0.33 | -0.3 | |||
64 | AT2G27950 | Ring/U-Box superfamily protein | 0.56 | 0.33 | -0.31 | |||
65 | AT3G45680 | Major facilitator superfamily protein | 0.56 | 0.31 | -0.3 | |||
66 | AT4G21430 | Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase |
B160 | 0.56 | 0.31 | -0.31 | ||
67 | AT3G42160 | Pectin lyase-like superfamily protein | 0.56 | 0.34 | -0.32 | |||
68 | AT1G34770 | CONTAINS InterPro DOMAIN/s: MAGE protein (InterPro:IPR002190); Has 1274 Blast hits to 1260 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1104; Fungi - 45; Plants - 49; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). |
-0.55 | 0.33 | -0.29 | |||
69 | AT5G56620 | NAC domain containing protein 99 | NAC domain containing protein 99, NAC domain containing protein 99 |
-0.54 | 0.31 | -0.33 | ||
70 | AT2G37120 | S1FA-like DNA-binding protein | -0.54 | 0.33 | -0.31 | |||
71 | AT3G25640 | Protein of unknown function, DUF617 | -0.54 | 0.31 | -0.32 | |||
72 | AT5G59990 | CCT motif family protein | -0.54 | 0.32 | -0.31 | |||
73 | AT3G01190 | Peroxidase superfamily protein | -0.53 | 0.32 | -0.32 | |||
74 | AT5G60630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.52 | 0.34 | -0.31 | |||
75 | AT5G25890 | indole-3-acetic acid inducible 28 | indole-3-acetic acid inducible 28, IAA-ALANINE RESISTANT 2 |
-0.52 | 0.33 | -0.32 | ||
76 | AT4G13190 | Protein kinase superfamily protein | -0.51 | 0.32 | -0.33 | |||
77 | AT1G68880 | basic leucine-zipper 8 | basic leucine-zipper 8, basic leucine-zipper 8 |
-0.51 | 0.34 | -0.34 | ||
78 | AT2G29995 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07175.1); Has 14 Blast hits to 14 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.31 | -0.32 | |||
79 | AT5G63760 | RING/U-box superfamily protein | ARIADNE 15, ARABIDOPSIS ARIADNE 15 | -0.49 | 0.32 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
80 | C0129 | Kaempferol-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside | Kaempferol-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside | - | kaempferol glucoside biosynthesis (Arabidopsis) | 0.78 | 0.46 | -0.44 | ||
81 | C0009 | myo-Inositol | - | myo-Inositol | stachyose biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), D-myo-inositol (1,4,5)-trisphosphate degradation, galactosylcyclitol biosynthesis, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, phytate degradation I, myo-inositol biosynthesis, ajugose biosynthesis I (galactinol-dependent), phospholipid biosynthesis II |
0.73 | 0.46 | -0.42 | ||
82 | C0239 | Spermidine | - | Spermidine | spermine biosynthesis, spermine and spermidine degradation III, beta-alanine biosynthesis I, hypusine biosynthesis, spermidine hydroxycinnamic acid conjugates biosynthesis, spermidine biosynthesis I |
-0.71 | 0.44 | -0.48 | ||
83 | C0089 | Fortunellin | - | - | - | 0.6 | 0.46 | -0.45 | ||
84 | C0232 | Shikimic acid | - | Shikimate | phenylpropanoid biosynthesis, chorismate biosynthesis, simple coumarins biosynthesis |
0.56 | 0.31 | -0.32 |