AT5G07040 : -
Query Information
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AGICode AT5G07040
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G07040 RING/U-box superfamily protein 1 0.31 -0.33
2 AT5G41330 BTB/POZ domain with WD40/YVTN repeat-like protein -0.75 0.29 -0.32
3 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.73 0.31 -0.3
4 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 -0.71 0.33 -0.34
5 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 -0.7 0.32 -0.32
6 AT1G78610 mechanosensitive channel of small conductance-like 6 mechanosensitive channel of small
conductance-like 6		 -0.7 0.31 -0.32
7 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 0.69 0.33 -0.33
8 AT5G24740 Protein of unknown function (DUF1162) -0.68 0.29 -0.31
9 AT2G45570 cytochrome P450, family 76, subfamily C, polypeptide 2 cytochrome P450, family 76,
subfamily C, polypeptide 2		 -0.67 0.32 -0.28
10 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.32 -0.32
11 AT3G07600 Heavy metal transport/detoxification superfamily protein 0.67 0.32 -0.32
12 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 -0.67 0.3 -0.31
13 AT1G60450 galactinol synthase 7 galactinol synthase 7, galactinol
synthase 7		 -0.67 0.3 -0.32
14 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 -0.67 0.33 -0.32
15 AT3G12580 heat shock protein 70 ARABIDOPSIS HEAT SHOCK PROTEIN 70,
heat shock protein 70		 -0.66 0.31 -0.31
16 AT2G02660 F-box associated ubiquitination effector family protein 0.65 0.31 -0.33
17 AT5G11290 Plant protein of unknown function (DUF247) -0.65 0.31 -0.3
18 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.32 -0.31
19 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 -0.65 0.3 -0.3
20 AT5G52580 RabGAP/TBC domain-containing protein -0.65 0.3 -0.31
21 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 0.65 0.31 -0.3
22 AT3G07420 asparaginyl-tRNA synthetase 2 ASPARAGINYL-TRNA SYNTHETASE 2,
asparaginyl-tRNA synthetase 2,
SYNTHETASE C2, ASPARAGINYL-TRNA
SYNTHETASE 2		 -0.64 0.32 -0.31
23 AT4G37020 BEST Arabidopsis thaliana protein match is: eukaryotic
initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.3 -0.33
24 AT2G25620 DNA-binding protein phosphatase 1 DNA-binding protein phosphatase 1,
DNA-binding protein phosphatase 1		 -0.64 0.28 -0.33
25 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 0.64 0.32 -0.3
26 AT2G46240 BCL-2-associated athanogene 6 ARABIDOPSIS THALIANA
BCL-2-ASSOCIATED ATHANOGENE 6,
BCL-2-associated athanogene 6		 -0.64 0.3 -0.32
27 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.3 -0.31
28 AT4G07890 transposable element gene 0.64 0.32 -0.32
29 AT4G14600 Target SNARE coiled-coil domain protein 0.63 0.31 -0.31
30 AT1G68330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits
to 147 proteins in 23 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.63 0.29 -0.33
31 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 -0.63 0.31 -0.31
32 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 -0.63 0.35 -0.3
33 AT3G09735 S1FA-like DNA-binding protein 0.63 0.32 -0.32
34 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH 0.62 0.32 -0.3
35 AT3G25260 Major facilitator superfamily protein -0.62 0.3 -0.28
36 AT3G56890 F-box associated ubiquitination effector family protein -0.62 0.3 -0.28
37 AT1G03960 Calcium-binding EF hand family protein -0.62 0.3 -0.31
38 AT4G26330 Subtilisin-like serine endopeptidase family protein ATSBT3.18, UNFERTILIZED EMBRYO SAC
17		 0.62 0.3 -0.31
39 AT4G38120 ARM repeat superfamily protein -0.62 0.3 -0.32
40 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 -0.62 0.31 -0.33
41 AT2G44180 methionine aminopeptidase 2A methionine aminopeptidase 2A 0.61 0.31 -0.31
42 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 -0.61 0.31 -0.31
43 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.31 -0.3
44 AT5G09790 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 5, PIGMENT DEFECTIVE 336,
SETDOMAIN GROUP 15		 0.61 0.3 -0.32
45 AT2G37120 S1FA-like DNA-binding protein 0.61 0.32 -0.3
46 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 0.61 0.31 -0.31
47 AT2G46930 Pectinacetylesterase family protein 0.61 0.33 -0.32
48 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.61 0.3 -0.32
49 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 -0.61 0.32 -0.31
50 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 0.61 0.32 -0.31
51 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 0.61 0.31 -0.32
52 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 0.61 0.31 -0.32
53 AT5G04410 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 78, NAC domain containing
protein 2		 -0.61 0.31 -0.31
54 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.6 0.3 -0.32
55 AT5G56230 prenylated RAB acceptor 1.G2 prenylated RAB acceptor 1.G2 0.6 0.32 -0.31
56 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.6 0.3 -0.3
57 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.6 0.3 -0.3
58 AT4G16280 RNA binding;abscisic acid binding FCA -0.6 0.3 -0.32
59 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain -0.6 0.31 -0.32
60 AT4G36460 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.31
61 AT5G52020 Integrase-type DNA-binding superfamily protein 0.6 0.34 -0.32
62 AT2G07650 transposable element gene -0.6 0.3 -0.29
63 AT1G48220 Protein kinase superfamily protein -0.6 0.31 -0.31
64 AT4G30420 nodulin MtN21 /EamA-like transporter family protein 0.6 0.32 -0.31
65 AT1G62260 mitochondrial editing factor 9 mitochondrial editing factor 9 -0.59 0.31 -0.31
66 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.59 0.31 -0.32
67 AT4G16400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.59 0.32 -0.31
68 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 -0.59 0.3 -0.31
69 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.59 0.3 -0.34
70 AT4G13960 F-box/RNI-like superfamily protein 0.59 0.3 -0.32
71 AT1G75790 SKU5 similar 18 SKU5 similar 18 -0.59 0.31 -0.3
72 AT1G72350 MADS-box transcription factor family protein -0.59 0.31 -0.31
73 AT2G46560 transducin family protein / WD-40 repeat family protein -0.59 0.3 -0.29
74 AT1G10720 BSD domain-containing protein 0.59 0.32 -0.3
75 AT4G14630 germin-like protein 9 germin-like protein 9 0.59 0.33 -0.29
76 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.31 -0.31
77 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.59 0.33 -0.29
78 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein -0.58 0.3 -0.31
79 AT2G36400 growth-regulating factor 3 growth-regulating factor 3,
growth-regulating factor 3		 0.58 0.3 -0.32
80 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.58 0.33 -0.34
81 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 -0.58 0.31 -0.31
82 AT2G42870 phy rapidly regulated 1 HELIX-LOOP-HELIX 1, PHY RAPIDLY
REGULATED 1		 0.58 0.31 -0.3
83 AT3G20950 cytochrome P450, family 705, subfamily A, polypeptide 32 cytochrome P450, family 705,
subfamily A, polypeptide 32		 0.58 0.32 -0.34
84 AT3G06090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower, leaf, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, LP.08 eight leaves visible, E expanded cotyledon
stage; Has 7 Blast hits to 7 proteins in 2 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.31 -0.31
85 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.58 0.31 -0.32
86 AT1G43970 unknown protein; Has 10 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.33 -0.33
87 AT4G33870 Peroxidase superfamily protein -0.58 0.33 -0.31
88 AT5G01290 mRNA capping enzyme family protein -0.58 0.31 -0.32
89 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 0.58 0.31 -0.3
90 AT3G59910 Ankyrin repeat family protein -0.57 0.32 -0.32
91 AT3G04030 Homeodomain-like superfamily protein -0.57 0.31 -0.35
92 AT2G25760 Protein kinase family protein -0.57 0.34 -0.3
93 AT3G20190 Leucine-rich repeat protein kinase family protein 0.57 0.31 -0.33
94 AT4G05550 transposable element gene 0.57 0.3 -0.32
95 AT3G09240 Protein kinase protein with tetratricopeptide repeat domain 0.57 0.31 -0.32
96 AT4G08340 transposable element gene 0.57 0.32 -0.31
97 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.56 0.29 -0.32
98 AT2G11150 transposable element gene -0.56 0.31 -0.34
99 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 0.56 0.32 -0.3
100 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 -0.56 0.31 -0.32
101 AT3G24460 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.56 0.33 -0.33
102 AT5G34895 transposable element gene 0.56 0.32 -0.33
103 AT2G43280 Far-red impaired responsive (FAR1) family protein 0.56 0.32 -0.31
104 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein -0.56 0.33 -0.33
105 AT3G19610 Plant protein of unknown function (DUF936) 0.56 0.33 -0.33
106 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 -0.56 0.32 -0.3
107 AT4G15200 formin 3 formin 3, formin 3 0.56 0.32 -0.32
108 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 -0.56 0.3 -0.34
109 AT5G15400 U-box domain-containing protein -0.56 0.3 -0.33
110 AT5G18120 APR-like 7 APR-like 7, APR-like 7 0.56 0.32 -0.29
111 AT2G15870 transposable element gene 0.56 0.31 -0.27
112 AT3G45880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.55 0.32 -0.31
113 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 0.55 0.3 -0.3
114 AT4G17690 Peroxidase superfamily protein 0.55 0.33 -0.3
115 AT1G16590 DNA-binding HORMA family protein ATREV7, REV7 0.55 0.3 -0.3
116 AT3G09470 Major facilitator superfamily protein 0.55 0.32 -0.32
117 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.55 0.32 -0.34
118 AT2G29620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G07330.1); Has 887 Blast hits
to 750 proteins in 151 species: Archae - 2; Bacteria - 63;
Metazoa - 270; Fungi - 51; Plants - 111; Viruses - 6; Other
Eukaryotes - 384 (source: NCBI BLink).		 0.55 0.31 -0.31
119 AT4G04690 F-box and associated interaction domains-containing protein 0.55 0.33 -0.29
120 AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein 0.54 0.3 -0.32
121 AT1G50930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits
to 213 proteins in 63 species: Archae - 0; Bacteria - 2;
Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other
Eukaryotes - 70 (source: NCBI BLink).		 0.54 0.3 -0.31
122 AT2G35740 nositol transporter 3 NOSITOL TRANSPORTER 3, nositol
transporter 3		 0.54 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.79 0.41 -0.45 C0228
124 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.71 0.45 -0.45 C0105
125 C0145 Maltotetraose - Maltotetraose starch degradation II -0.68 0.45 -0.46 C0145