AGICode | AT5G07060 |
Description | CCCH-type zinc fingerfamily protein with RNA-binding domain |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G07060 | CCCH-type zinc fingerfamily protein with RNA-binding domain | MOS4-associated complex subunit 5C | 1 | 0.31 | -0.34 | ||
2 | AT5G16220 | Octicosapeptide/Phox/Bem1p family protein | 0.64 | 0.33 | -0.3 | |||
3 | AT1G53020 | UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein ligase |
HO2 FAMILY UBIQUITIN CONJUGATION ENZYME 3, ubiquitin-conjugating enzyme 26 |
-0.64 | 0.3 | -0.31 | ||
4 | AT5G10680 | calmodulin-binding protein-related | 0.61 | 0.32 | -0.33 | |||
5 | AT1G31780 | CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). |
0.6 | 0.32 | -0.32 | |||
6 | AT1G73840 | hydroxyproline-rich glycoprotein family protein | ENHANCED SILENCING PHENOTYPE 1 | 0.58 | 0.3 | -0.32 | ||
7 | AT3G19470 | F-box and associated interaction domains-containing protein | 0.57 | 0.32 | -0.32 | |||
8 | AT1G44130 | Eukaryotic aspartyl protease family protein | 0.57 | 0.3 | -0.31 | |||
9 | AT3G23160 | Protein of unknown function (DUF668) | -0.56 | 0.32 | -0.34 | |||
10 | AT3G12380 | actin-related protein 5 | actin-related protein 5, ACTIN-RELATED PROTEIN 5 |
0.56 | 0.3 | -0.32 | ||
11 | AT3G48560 | chlorsulfuron/imidazolinone resistant 1 | ACETOHYDROXY ACID SYNTHASE, ACETOLACTATE SYNTHASE, chlorsulfuron/imidazolinone resistant 1, IMIDAZOLE RESISTANT 1, TRIAZOLOPYRIMIDINE RESISTANT 5 |
0.56 | 0.33 | -0.32 | ||
12 | AT5G15300 | Pentatricopeptide repeat (PPR) superfamily protein | 0.56 | 0.3 | -0.31 | |||
13 | AT1G52260 | PDI-like 1-5 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5, PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5 |
0.56 | 0.32 | -0.3 | ||
14 | AT4G26000 | RNA-binding KH domain-containing protein | PEPPER | 0.55 | 0.32 | -0.33 | ||
15 | AT5G23710 | DNA binding;DNA-directed RNA polymerases | 0.55 | 0.32 | -0.33 | |||
16 | AT3G29750 | Eukaryotic aspartyl protease family protein | 0.54 | 0.31 | -0.31 | |||
17 | AT1G50420 | scarecrow-like 3 | SCARECROW-LIKE 3, scarecrow-like 3 | 0.54 | 0.32 | -0.34 | ||
18 | AT1G55440 | Cysteine/Histidine-rich C1 domain family protein | 0.54 | 0.32 | -0.33 | |||
19 | AT2G23740 | nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding |
0.53 | 0.31 | -0.31 | |||
20 | AT5G37630 | ARM repeat superfamily protein | EMBRYO DEFECTIVE 2656 | 0.53 | 0.33 | -0.31 | ||
21 | AT3G11000 | DCD (Development and Cell Death) domain protein | -0.53 | 0.3 | -0.3 | |||
22 | AT2G11390 | transposable element gene | 0.52 | 0.3 | -0.32 | |||
23 | AT5G55590 | Pectin lyase-like superfamily protein | QUARTET 1 | -0.52 | 0.29 | -0.31 | ||
24 | AT2G02061 | Nucleotide-diphospho-sugar transferase family protein | 0.51 | 0.31 | -0.31 | |||
25 | AT3G28620 | Zinc finger, C3HC4 type (RING finger) family protein | -0.51 | 0.32 | -0.3 | |||
26 | AT1G25390 | Protein kinase superfamily protein | -0.51 | 0.33 | -0.32 | |||
27 | AT4G29770 | Target of trans acting-siR480/255. | -0.5 | 0.33 | -0.33 | |||
28 | AT3G30210 | myb domain protein 121 | ATMYB121, myb domain protein 121 | 0.49 | 0.29 | -0.31 | ||
29 | AT1G22210 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
trehalose-6-phosphate phosphatase C |
-0.49 | 0.31 | -0.33 | ||
30 | AT3G29265 | transposable element gene | -0.49 | 0.29 | -0.3 | |||
31 | AT3G47680 | DNA binding | 0.49 | 0.31 | -0.3 | |||
32 | AT5G41170 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.48 | 0.3 | -0.32 | |||
33 | AT1G10810 | NAD(P)-linked oxidoreductase superfamily protein | -0.48 | 0.31 | -0.33 | |||
34 | AT2G19960 | hAT family dimerisation domain | 0.47 | 0.3 | -0.31 | |||
35 | AT5G25415 | Protein of Unknown Function (DUF239) | 0.47 | 0.32 | -0.33 | |||
36 | AT5G17370 | Transducin/WD40 repeat-like superfamily protein | -0.47 | 0.3 | -0.32 | |||
37 | ATMG00140 | hypothetical protein | ORF167 | -0.47 | 0.34 | -0.32 | ||
38 | AT2G36180 | EF hand calcium-binding protein family | 0.47 | 0.31 | -0.3 | |||
39 | AT3G11370 | Cysteine/Histidine-rich C1 domain family protein | -0.47 | 0.32 | -0.32 | |||
40 | AT1G01760 | adenosine deaminases;RNA binding;RNA binding;adenosine deaminases |
0.46 | 0.35 | -0.31 | |||
41 | AT4G24410 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.45 | 0.3 | -0.33 | |||
42 | AT2G19770 | profilin 5 | profilin 5 | -0.45 | 0.31 | -0.31 | ||
43 | AT5G39030 | Protein kinase superfamily protein | -0.45 | 0.3 | -0.31 | |||
44 | AT3G25720 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
0.45 | 0.3 | -0.3 | |||
45 | AT4G16640 | Matrixin family protein | -0.45 | 0.31 | -0.32 | |||
46 | AT4G23070 | RHOMBOID-like protein 7 | RHOMBOID-like protein 7, RHOMBOID-like protein 7 |
-0.44 | 0.31 | -0.33 | ||
47 | AT5G32540 | transposable element gene | -0.44 | 0.32 | -0.33 | |||
48 | AT5G48690 | CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 7001 Blast hits to 5165 proteins in 492 species: Archae - 9; Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287; Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink). |
-0.43 | 0.31 | -0.31 | |||
49 | AT5G20810 | SAUR-like auxin-responsive protein family | -0.43 | 0.3 | -0.29 | |||
50 | AT3G10560 | Cytochrome P450 superfamily protein | CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 7, UNFERTILIZED EMBRYO SAC 9 |
-0.43 | 0.32 | -0.33 | ||
51 | AT2G39790 | Mitochondrial glycoprotein family protein | -0.43 | 0.33 | -0.32 | |||
52 | AT1G16770 | unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.42 | 0.3 | -0.34 | |||
53 | AT3G19890 | F-box family protein | -0.41 | 0.31 | -0.33 | |||
54 | AT5G26970 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.41 | 0.31 | -0.33 | |||
55 | AT1G42410 | transposable element gene | -0.4 | 0.32 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
56 | C0223 | Quercetin-3-O-β-glucopyranoside-7-O-α-rhamnospyranoide | - | Quercetin-3-O-glucoside-7-O-rhamnoside | quercetin glucoside biosynthesis (Arabidopsis) | 0.58 | 0.29 | -0.32 |