AT5G06280 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G06280
Description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 1 0.3 -0.32
2 AT4G25500 arginine/serine-rich splicing factor 35 arginine/serine-rich splicing
factor 40, AT-SRP40, ARABIDOPSIS
THALIANA ARGININE/SERINE-RICH
SPLICING FACTOR 35, ATRSP40,
arginine/serine-rich splicing
factor 40, arginine/serine-rich
splicing factor 35		 -0.72 0.3 -0.31
3 AT1G71350 eukaryotic translation initiation factor SUI1 family
protein		 -0.71 0.31 -0.3
4 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.69 0.31 -0.31
5 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 -0.69 0.32 -0.32
6 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein -0.68 0.31 -0.33
7 AT1G72320 pumilio 23 pumilio 23, pumilio 23 -0.68 0.32 -0.31
8 AT1G49720 abscisic acid responsive element-binding factor 1 abscisic acid responsive
element-binding factor 1		 -0.66 0.31 -0.3
9 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 -0.66 0.32 -0.33
10 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.32 -0.34
11 AT4G18260 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.64 0.32 -0.29
12 AT2G42390 protein kinase C substrate, heavy chain-related 0.64 0.3 -0.33
13 AT5G56600 profilin 3 PROFILIN 3, profilin 3 0.64 0.3 -0.32
14 AT5G61380 CCT motif -containing response regulator protein APRR1, TIMING OF CAB EXPRESSION 1,
PSEUDO-RESPONSE REGULATOR 1,
TIMING OF CAB EXPRESSION 1		 -0.63 0.31 -0.34
15 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 0.63 0.31 -0.34
16 AT5G01350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.33 -0.32
17 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.62 0.33 -0.3
18 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 -0.62 0.31 -0.31
19 AT2G36930 zinc finger (C2H2 type) family protein -0.62 0.3 -0.32
20 AT1G78620 Protein of unknown function DUF92, transmembrane 0.62 0.33 -0.32
21 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 -0.61 0.31 -0.31
22 AT3G62310 RNA helicase family protein -0.61 0.32 -0.31
23 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.34 -0.29
24 AT4G38890 FMN-linked oxidoreductases superfamily protein -0.61 0.31 -0.33
25 AT3G55120 Chalcone-flavanone isomerase family protein A11, CHALCONE FLAVANONE ISOMERASE,
TRANSPARENT TESTA 5		 -0.61 0.3 -0.33
26 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 -0.61 0.3 -0.3
27 AT1G68500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25422.1); Has 16 Blast hits
to 16 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.32
28 AT2G44950 histone mono-ubiquitination 1 histone mono-ubiquitination 1,
REDUCED DORMANCY 4		 -0.61 0.31 -0.3
29 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein -0.61 0.29 -0.33
30 AT5G10630 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.6 0.32 -0.3
31 AT2G38150 alpha 1,4-glycosyltransferase family protein 0.6 0.3 -0.31
32 AT1G03905 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette I19 -0.6 0.33 -0.32
33 AT1G71090 Auxin efflux carrier family protein 0.59 0.34 -0.3
34 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein -0.59 0.32 -0.32
35 AT5G57110 autoinhibited Ca2+ -ATPase, isoform 8 autoinhibited Ca2+ -ATPase,
isoform 8, AUTOINHIBITED CA2+
-ATPASE, ISOFORM 8		 -0.59 0.31 -0.31
36 AT2G40650 PRP38 family protein -0.59 0.31 -0.32
37 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 0.59 0.31 -0.3
38 AT5G24760 GroES-like zinc-binding dehydrogenase family protein -0.58 0.32 -0.33
39 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 -0.58 0.32 -0.31
40 AT2G23910 NAD(P)-binding Rossmann-fold superfamily protein -0.58 0.34 -0.3
41 AT4G00520 Acyl-CoA thioesterase family protein 0.58 0.31 -0.3
42 AT1G28060 Pre-mRNA-splicing factor 3 -0.58 0.3 -0.32
43 AT2G34970 Trimeric LpxA-like enzyme -0.58 0.31 -0.31
44 AT5G28470 Major facilitator superfamily protein 0.58 0.31 -0.31
45 AT4G27880 Protein with RING/U-box and TRAF-like domains -0.58 0.32 -0.31
46 AT1G09440 Protein kinase superfamily protein 0.58 0.32 -0.3
47 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 -0.57 0.33 -0.32
48 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 0.57 0.31 -0.32
49 AT1G77180 chromatin protein family SKIP -0.57 0.32 -0.32
50 AT5G37290 ARM repeat superfamily protein 0.57 0.31 -0.34
51 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 0.57 0.31 -0.31
52 AT5G28010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.56 0.33 -0.33
53 AT1G11160 Transducin/WD40 repeat-like superfamily protein 0.56 0.32 -0.31
54 AT5G53570 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.56 0.32 -0.31
55 AT4G00880 SAUR-like auxin-responsive protein family 0.56 0.3 -0.31
56 AT5G35840 phytochrome C phytochrome C 0.56 0.3 -0.29
57 AT3G60910 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.3 -0.29
58 AT1G02330 CONTAINS InterPro DOMAIN/s: Hepatocellular
carcinoma-associated antigen 59 (InterPro:IPR010756); Has
1239 Blast hits to 998 proteins in 204 species: Archae - 4;
Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87;
Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).		 -0.56 0.3 -0.31
59 AT4G38580 farnesylated protein 6 farnesylated protein 6,
farnesylated protein 6, HEAVY
METAL ASSOCIATED ISOPRENYLATED
PLANT PROTEIN 26		 -0.56 0.33 -0.33
60 AT1G74700 tRNAse Z1 NUZ, tRNAse Z1 -0.56 0.32 -0.32
61 AT5G24150 FAD/NAD(P)-binding oxidoreductase family protein SQUALENE MONOOXYGENASE 5, SQP1 0.56 0.32 -0.33
62 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 0.56 0.31 -0.33
63 AT3G04820 Pseudouridine synthase family protein -0.56 0.31 -0.32
64 AT5G06850 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.56 0.33 -0.32
65 AT4G38130 histone deacetylase 1 ARABIDOPSIS HISTONE DEACETYLASE 1,
ARABIDOPSIS HISTONE DEACETYLASE
19, histone deacetylase 1, HDA1,
HISTONE DEACETYLASE 19, RPD3A		 -0.55 0.31 -0.31
66 AT4G09390 transposable element gene 0.55 0.34 -0.31
67 AT5G48250 B-box type zinc finger protein with CCT domain -0.55 0.31 -0.32
68 AT5G14270 bromodomain and extraterminal domain protein 9 bromodomain and extraterminal
domain protein 9, bromodomain and
extraterminal domain protein 9		 -0.55 0.32 -0.29
69 AT5G08370 alpha-galactosidase 2 alpha-galactosidase 2,
alpha-galactosidase 2		 0.55 0.31 -0.31
70 AT1G60460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage; Has
23 Blast hits to 23 proteins in 8 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.32 -0.31
71 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 0.55 0.34 -0.31
72 AT2G33730 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.34 -0.31
73 AT4G36480 long-chain base1 long-chain base1, EMBRYO DEFECTIVE
2779, FUMONISIN B1 RESISTANT 11,
long-chain base1		 -0.55 0.3 -0.34
74 AT5G20450 CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);
BEST Arabidopsis thaliana protein match is: Myosin family
protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast
hits to 1458 proteins in 355 species: Archae - 28; Bacteria
- 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses -
3; Other Eukaryotes - 412 (source: NCBI BLink).		 0.55 0.33 -0.29
75 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 0.54 0.31 -0.3
76 AT2G36350 Protein kinase superfamily protein -0.54 0.33 -0.3
77 AT5G51300 splicing factor-related -0.54 0.32 -0.33
78 AT4G39240 Galactose oxidase/kelch repeat superfamily protein 0.54 0.32 -0.29
79 AT4G19600 Cyclin family protein CYCT1;4 -0.53 0.31 -0.3
80 AT3G49725 GTP-binding protein, HflX -0.53 0.3 -0.33
81 AT1G13180 Actin-like ATPase superfamily protein ACTIN-RELATED PROTEIN 3,
ARABIDOPSIS THALIANA ACTIN-RELATED
PROTEIN 3, DISTORTED TRICHOMES 1		 -0.53 0.29 -0.32
82 AT5G28020 cysteine synthase D2 CYSTEINE SYNTHASE D2, cysteine
synthase D2		 0.53 0.31 -0.32
83 AT1G51610 Cation efflux family protein -0.53 0.3 -0.31
84 AT1G49790 F-box associated ubiquitination effector family protein 0.53 0.32 -0.31
85 AT5G63830 HIT-type Zinc finger family protein -0.53 0.3 -0.34
86 AT5G41260 Protein kinase protein with tetratricopeptide repeat domain -0.53 0.33 -0.32
87 AT1G64270 transposable element gene 0.53 0.33 -0.31
88 AT3G49920 voltage dependent anion channel 5 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 5, voltage
dependent anion channel 5		 0.53 0.33 -0.32
89 AT4G27820 beta glucosidase 9 beta glucosidase 9 -0.52 0.3 -0.33
90 AT5G27000 kinesin 4 kinesin 4, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA D		 -0.52 0.33 -0.31
91 AT3G05850 transposable element gene -0.52 0.31 -0.3
92 AT5G37130 Protein prenylyltransferase superfamily protein -0.52 0.34 -0.29