AT5G05700 : ATATE1
Query Information
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AGICode AT5G05700
Description arginine-tRNA protein transferase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G05700 arginine-tRNA protein transferase 1 ATATE1, arginine-tRNA protein
transferase 1, DELAYED LEAF
SENESCENCE 1		 1 0.31 -0.31
2 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 0.74 0.33 -0.32
3 AT3G47000 Glycosyl hydrolase family protein 0.71 0.33 -0.33
4 AT3G07390 auxin-responsive family protein Auxin-Induced in Root cultures 12 -0.7 0.31 -0.31
5 AT5G05270 Chalcone-flavanone isomerase family protein -0.7 0.31 -0.31
6 AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein -0.7 0.3 -0.33
7 AT5G25920 BEST Arabidopsis thaliana protein match is: Eukaryotic
aspartyl protease family protein (TAIR:AT3G29750.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.35 -0.3
8 AT1G57600 MBOAT (membrane bound O-acyl transferase) family protein 0.69 0.29 -0.3
9 AT2G28440 proline-rich family protein 0.68 0.31 -0.33
10 AT1G35470 SPla/RYanodine receptor (SPRY) domain-containing protein 0.66 0.32 -0.31
11 AT5G61550 U-box domain-containing protein kinase family protein 0.66 0.32 -0.3
12 AT4G01450 nodulin MtN21 /EamA-like transporter family protein 0.66 0.31 -0.31
13 AT3G15610 Transducin/WD40 repeat-like superfamily protein 0.64 0.32 -0.31
14 AT5G64570 beta-D-xylosidase 4 ARABIDOPSIS THALIANA
BETA-D-XYLOSIDASE 4,
beta-D-xylosidase 4		 0.64 0.3 -0.31
15 AT3G62740 beta glucosidase 7 beta glucosidase 7 -0.63 0.32 -0.29
16 AT3G61540 alpha/beta-Hydrolases superfamily protein 0.63 0.32 -0.3
17 AT1G12470 zinc ion binding 0.63 0.3 -0.3
18 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 -0.63 0.31 -0.31
19 AT5G55810 nicotinate/nicotinamide mononucleotide adenyltransferase nicotinate/nicotinamide
mononucleotide adenyltransferase,
nicotinate/nicotinamide
mononucleotide adenyltransferase		 0.63 0.31 -0.33
20 AT4G14900 FRIGIDA-like protein -0.62 0.3 -0.34
21 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.62 0.31 -0.31
22 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 -0.62 0.32 -0.29
23 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 0.62 0.3 -0.31
24 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 -0.62 0.31 -0.31
25 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 0.62 0.32 -0.31
26 AT5G04670 Enhancer of polycomb-like transcription factor protein -0.61 0.31 -0.34
27 AT2G20790 clathrin adaptor complexes medium subunit family protein 0.61 0.29 -0.33
28 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 -0.61 0.3 -0.33
29 AT2G43970 RNA-binding protein 0.61 0.3 -0.33
30 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.32
31 AT1G43900 Protein phosphatase 2C family protein 0.61 0.3 -0.33
32 AT1G32860 Glycosyl hydrolase superfamily protein -0.61 0.32 -0.32
33 AT4G13020 Protein kinase superfamily protein MHK 0.61 0.33 -0.33
34 AT5G40890 chloride channel A chloride channel A, ATCLCA,
chloride channel A, CHLORIDE
CHANNEL-A, CHLORIDE CHANNEL A		 0.61 0.32 -0.33
35 AT3G55760 unknown protein; LOCATED IN: chloroplast stroma,
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast
hits to 125 proteins in 40 species: Archae - 0; Bacteria -
3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.6 0.31 -0.34
36 AT2G14910 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in
102 species: Archae - 0; Bacteria - 300; Metazoa - 25;
Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191
(source: NCBI BLink).		 0.6 0.3 -0.32
37 AT3G30160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G35320.1); Has 9 Blast hits to 9 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.34
38 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 -0.6 0.31 -0.31
39 AT3G19940 Major facilitator superfamily protein 0.6 0.34 -0.31
40 AT3G50270 HXXXD-type acyl-transferase family protein 0.6 0.33 -0.31
41 AT1G67360 Rubber elongation factor protein (REF) -0.59 0.32 -0.31
42 AT2G18230 pyrophosphorylase 2 pyrophosphorylase 2,
pyrophosphorylase 2		 -0.59 0.3 -0.32
43 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c -0.59 0.32 -0.31
44 AT1G21120 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 2		 -0.59 0.33 -0.31
45 AT3G47420 phosphate starvation-induced gene 3 Glycerol-3-phosphate permease 1,
phosphate starvation-induced gene
3, Glycerol-3-phosphate permease
1, phosphate starvation-induced
gene 3		 0.58 0.33 -0.32
46 AT5G48750 Cytochrome b561/ferric reductase transmembrane with DOMON
related domain		 -0.58 0.31 -0.31
47 AT3G22840 Chlorophyll A-B binding family protein ELIP, EARLY LIGHT-INDUCABLE
PROTEIN		 -0.58 0.3 -0.34
48 AT5G50860 Protein kinase superfamily protein 0.58 0.31 -0.3
49 AT4G39780 Integrase-type DNA-binding superfamily protein 0.58 0.31 -0.31
50 AT4G24490 RAB geranylgeranyl transferase alpha subunit 1 RAB geranylgeranyl transferase
alpha subunit 1, RAB
geranylgeranyl transferase alpha
subunit 1		 0.58 0.32 -0.3
51 AT1G10980 Lung seven transmembrane receptor family protein 0.58 0.33 -0.31
52 AT1G56200 embryo defective 1303 embryo defective 1303 0.58 0.28 -0.31
53 AT3G55120 Chalcone-flavanone isomerase family protein A11, CHALCONE FLAVANONE ISOMERASE,
TRANSPARENT TESTA 5		 -0.58 0.3 -0.33
54 AT1G71770 poly(A)-binding protein 5 poly(A)-binding protein 5 -0.58 0.29 -0.33
55 AT2G28100 alpha-L-fucosidase 1 alpha-L-fucosidase 1,
alpha-L-fucosidase 1		 0.57 0.31 -0.31
56 AT5G53340 Galactosyltransferase family protein 0.57 0.34 -0.29
57 AT1G53345 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in
75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi
- 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.57 0.29 -0.3
58 AT5G27100 glutamate receptor 2.1 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.1, glutamate receptor
2.1		 0.57 0.33 -0.31
59 AT3G18350 Plant protein of unknown function (DUF639) 0.57 0.3 -0.31
60 AT2G23300 Leucine-rich repeat protein kinase family protein -0.57 0.31 -0.32
61 AT2G19580 tetraspanin2 tetraspanin2 -0.56 0.33 -0.29
62 AT4G28020 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0066
(InterPro:IPR001378); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.56 0.31 -0.31
63 AT1G06710 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.33 -0.3
64 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.56 0.31 -0.33
65 AT2G34440 AGAMOUS-like 29 AGAMOUS-like 29 -0.56 0.31 -0.32
66 AT3G18215 Protein of unknown function, DUF599 0.56 0.31 -0.3
67 AT2G28200 C2H2-type zinc finger family protein 0.56 0.3 -0.33
68 AT2G32415 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.56 0.31 -0.29
69 AT4G38800 methylthioadenosine nucleosidase 1 ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 1, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
1, METHYLTHIOADENOSINE
NUCLEOSIDASE 1,
methylthioadenosine nucleosidase 1		 0.56 0.33 -0.34
70 AT4G17020 transcription factor-related 0.56 0.33 -0.31
71 AT1G09290 unknown protein; Has 73 Blast hits to 71 proteins in 26
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11;
Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.55 0.31 -0.34
72 AT2G18500 ovate family protein 7 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 7, ovate family protein 7		 -0.55 0.33 -0.34
73 AT1G19170 Pectin lyase-like superfamily protein 0.55 0.32 -0.32
74 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.55 0.33 -0.32
75 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.34 -0.31
76 AT5G56250 hapless 8 HAPLESS 8 0.54 0.32 -0.31
77 AT4G29650 Cytidine/deoxycytidylate deaminase family protein 0.54 0.35 -0.3
78 AT2G32680 receptor like protein 23 receptor like protein 23, receptor
like protein 23		 -0.54 0.31 -0.31
79 AT4G02890 Ubiquitin family protein UBQ14 0.54 0.31 -0.3
80 AT5G14340 myb domain protein 40 myb domain protein 40, myb domain
protein 40		 0.54 0.31 -0.32
81 AT4G31890 ARM repeat superfamily protein -0.54 0.31 -0.32
82 AT4G27110 COBRA-like protein 11 precursor COBRA-like protein 11 precursor -0.53 0.32 -0.3
83 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 -0.53 0.32 -0.29
84 AT5G58780 Undecaprenyl pyrophosphate synthetase family protein -0.53 0.32 -0.33
85 AT3G45860 cysteine-rich RLK (RECEPTOR-like protein kinase) 4 cysteine-rich RLK (RECEPTOR-like
protein kinase) 4		 -0.53 0.33 -0.31
86 AT4G23610 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.52 0.32 -0.32
87 AT5G14870 cyclic nucleotide-gated channel 18 CYCLIC NUCLEOTIDE-GATED CHANNEL
18, cyclic nucleotide-gated
channel 18		 -0.52 0.33 -0.3
88 AT1G33420 RING/FYVE/PHD zinc finger superfamily protein -0.51 0.33 -0.32
89 AT1G79320 metacaspase 6 metacaspase 6, metacaspase 2c,
metacaspase 6, metacaspase 2c		 -0.51 0.31 -0.33
90 AT5G01950 Leucine-rich repeat protein kinase family protein -0.51 0.31 -0.32
91 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.51 0.29 -0.32
92 AT2G20142 Toll-Interleukin-Resistance (TIR) domain family protein -0.51 0.3 -0.3
93 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 -0.5 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
94 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.75 0.41 -0.42
95 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.72 0.45 -0.42 C0088
96 C0026 2-Hydroxyisobutyric acid - - β oxidation 0.71 0.44 -0.43
97 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) 0.68 0.42 -0.45 C0075
98 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.67 0.44 -0.42 C0261
99 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.65 0.41 -0.45 C0262
100 C0218 Pyridoxamine phosphate Pyridoxamine-5'-phosphate Pyridoxamine-5'-phosphate pyridoxal 5'-phosphate salvage pathway 0.64 0.34 -0.32 C0218
101 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		0.64 0.44 -0.43 C0091
102 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.63 0.43 -0.41 C0073
103 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		0.6 0.32 -0.32 C0069
104 C0113 Histidinol - Histidinol histidine biosynthesis 0.57 0.32 -0.32 C0113
105 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		0.57 0.31 -0.3 C0066
106 C0058 Arginine D,L-Arginine L-Arginine arginine degradation VI (arginase 2 pathway),
arginine degradation I (arginase pathway),
arginine biosynthesis I,
putrescine biosynthesis II,
nitric oxide biosynthesis I (in plants),
citrulline biosynthesis,
putrescine biosynthesis I,
tRNA charging,
arginine biosynthesis II (acetyl cycle),
citrulline-nitric oxide cycle,
urea cycle,
L-Ndelta-acetylornithine biosynthesis 		0.56 0.32 -0.31 C0058