AT5G05550 : -
Query Information
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AGICode AT5G05550
Description sequence-specific DNA binding transcription factors
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G05550 sequence-specific DNA binding transcription factors 1 0.3 -0.31
2 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 -0.79 0.29 -0.34
3 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.74 0.29 -0.32
4 AT1G29240 Protein of unknown function (DUF688) 0.73 0.35 -0.31
5 AT5G02020 Encodes a protein involved in salt tolerance, names SIS
(Salt Induced Serine rich).		 Salt Induced Serine rich 0.73 0.31 -0.32
6 AT5G44110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATP-binding cassette A21,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN, ATPOP1, POP1		 -0.7 0.31 -0.29
7 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein		 -0.7 0.33 -0.31
8 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 0.7 0.32 -0.32
9 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.69 0.32 -0.3
10 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.32 -0.31
11 AT5G25490 Ran BP2/NZF zinc finger-like superfamily protein 0.69 0.32 -0.34
12 AT1G63000 nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose
synthase/epimerase-reductase,
UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E
PIMERASE-4-REDUCTASE 1		 -0.68 0.33 -0.31
13 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases -0.68 0.3 -0.33
14 AT1G15740 Leucine-rich repeat family protein 0.68 0.3 -0.31
15 AT3G24070 Zinc knuckle (CCHC-type) family protein 0.68 0.32 -0.34
16 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.32 -0.32
17 AT3G44110 DNAJ homologue 3 ATJ, DNAJ homologue 3, J3 -0.68 0.33 -0.31
18 AT1G66140 zinc finger protein 4 zinc finger protein 4 0.68 0.32 -0.32
19 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 -0.68 0.3 -0.33
20 AT1G04130 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR2, tetratricopeptide repeat 2 -0.67 0.31 -0.31
21 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA 0.67 0.31 -0.31
22 AT4G24800 MA3 domain-containing protein EIN2 C-terminus Interacting
Protein 1		 0.66 0.33 -0.32
23 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.66 0.33 -0.33
24 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 0.66 0.33 -0.33
25 AT2G38290 ammonium transporter 2 ammonium transporter 2, AMMONIUM
TRANSPORTER 2;1, ammonium
transporter 2		 -0.66 0.31 -0.29
26 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.66 0.3 -0.32
27 AT3G06330 RING/U-box superfamily protein 0.65 0.3 -0.33
28 AT5G09900 26S proteasome regulatory subunit, putative (RPN5) EMBRYO DEFECTIVE 2107, MARIPOSA,
REGULATORY PARTICLE NON-ATPASE
SUBUNIT 5A		 -0.65 0.32 -0.31
29 AT3G29360 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 2 -0.65 0.33 -0.32
30 AT5G13980 Glycosyl hydrolase family 38 protein 0.65 0.31 -0.32
31 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.3 -0.33
32 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 0.65 0.35 -0.3
33 AT1G09010 glycoside hydrolase family 2 protein 0.65 0.3 -0.32
34 AT3G25230 rotamase FKBP 1 ATFKBP62, FK506 BINDING PROTEIN
62, rotamase FKBP 1		 -0.64 0.31 -0.32
35 AT3G19100 Protein kinase superfamily protein 0.64 0.3 -0.32
36 AT3G51580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to
1607 proteins in 294 species: Archae - 2; Bacteria - 552;
Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38;
Other Eukaryotes - 253 (source: NCBI BLink).		 -0.64 0.33 -0.3
37 AT1G80910 Protein of unknown function (DUF1712) -0.64 0.32 -0.29
38 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.31 -0.31
39 AT5G15470 galacturonosyltransferase 14 galacturonosyltransferase 14 -0.64 0.35 -0.33
40 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 -0.64 0.32 -0.32
41 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 -0.64 0.3 -0.29
42 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 -0.64 0.31 -0.33
43 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 0.64 0.31 -0.31
44 AT1G52200 PLAC8 family protein -0.64 0.33 -0.35
45 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 0.64 0.32 -0.33
46 AT2G30500 Kinase interacting (KIP1-like) family protein 0.64 0.29 -0.33
47 AT3G44450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits
to 63 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.29 -0.32
48 AT5G42860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G45688.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.34 -0.31
49 AT5G10710 INVOLVED IN: chromosome segregation, cell division; LOCATED
IN: chromosome, centromeric region, nucleus; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O
(InterPro:IPR018464); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.32 -0.33
50 AT3G06380 tubby-like protein 9 tubby-like protein 9, tubby-like
protein 9		 0.63 0.31 -0.3
51 AT4G12730 FASCICLIN-like arabinogalactan 2 FASCICLIN-like arabinogalactan 2 -0.63 0.31 -0.31
52 AT4G37790 Homeobox-leucine zipper protein family HAT22 0.63 0.33 -0.3
53 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.63 0.3 -0.32
54 AT1G65310 xyloglucan endotransglucosylase/hydrolase 17 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 17,
xyloglucan
endotransglucosylase/hydrolase 17		 -0.62 0.3 -0.31
55 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.62 0.3 -0.33
56 AT4G15480 UDP-Glycosyltransferase superfamily protein UGT84A1 -0.62 0.32 -0.34
57 AT3G06035 Glycoprotein membrane precursor GPI-anchored -0.62 0.32 -0.31
58 AT5G46230 Protein of unknown function, DUF538 -0.62 0.31 -0.32
59 AT1G29150 non-ATPase subunit 9 non-ATPase subunit 9, REGULATORY
PARTICLE NON-ATPASE 6		 -0.62 0.31 -0.32
60 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.31 -0.29
61 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.29 -0.34
62 AT3G47600 myb domain protein 94 myb domain protein 94, ATMYBCP70,
myb domain protein 94		 0.61 0.29 -0.33
63 AT3G07090 PPPDE putative thiol peptidase family protein -0.61 0.32 -0.32
64 AT5G06330 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.61 0.31 -0.33
65 AT5G22500 fatty acid reductase 1 fatty acid reductase 1 0.61 0.31 -0.33
66 AT5G05800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.31 -0.31
67 AT4G35060 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 25		 -0.61 0.29 -0.32
68 AT5G43010 regulatory particle triple-A ATPase 4A regulatory particle triple-A
ATPase 4A		 -0.61 0.31 -0.33
69 AT1G70350 unknown protein; Has 98 Blast hits to 98 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.31
70 AT1G30960 GTP-binding family protein -0.61 0.33 -0.33
71 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.61 0.33 -0.3
72 AT1G71070 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.6 0.3 -0.33
73 AT1G07890 ascorbate peroxidase 1 ascorbate peroxidase 1, ATAPX01,
ATAPX1, CS1, maternal effect
embryo arrest 6		 -0.6 0.33 -0.31
74 AT3G58040 seven in absentia of Arabidopsis 2 seven in absentia of Arabidopsis 2 0.6 0.34 -0.33
75 AT2G19680 Mitochondrial ATP synthase subunit G protein -0.6 0.31 -0.3
76 AT5G60660 plasma membrane intrinsic protein 2;4 plasma membrane intrinsic protein
2;4, PIP2F		 -0.6 0.31 -0.31
77 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.6 0.31 -0.29
78 AT1G32360 Zinc finger (CCCH-type) family protein 0.6 0.31 -0.31
79 AT5G63190 MA3 domain-containing protein 0.6 0.33 -0.31
80 AT2G30110 ubiquitin-activating enzyme 1 ubiquitin-activating enzyme 1,
MODIFIER OF SNC1 5,
ubiquitin-activating enzyme 1		 -0.6 0.32 -0.32
81 AT1G69570 Dof-type zinc finger DNA-binding family protein -0.6 0.33 -0.3
82 AT1G27690 Protein of unknown function (DUF620) 0.6 0.32 -0.32
83 AT3G09440 Heat shock protein 70 (Hsp 70) family protein -0.6 0.34 -0.32
84 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 0.6 0.29 -0.31
85 AT4G22320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits
to 5363 proteins in 542 species: Archae - 33; Bacteria -
806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses -
151; Other Eukaryotes - 4399 (source: NCBI BLink).		 -0.6 0.29 -0.32
86 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein 0.59 0.34 -0.32
87 AT3G55940 Phosphoinositide-specific phospholipase C family protein -0.59 0.32 -0.29
88 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.59 0.31 -0.31
89 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.59 0.31 -0.3
90 AT3G52190 phosphate transporter traffic facilitator1 AtPHF1, phosphate transporter
traffic facilitator1		 -0.59 0.3 -0.31
91 AT2G27660 Cysteine/Histidine-rich C1 domain family protein -0.59 0.33 -0.3
92 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 0.59 0.31 -0.3
93 AT5G17060 ADP-ribosylation factor B1B ADP-ribosylation factor B1B,
ADP-ribosylation factor B1B		 -0.59 0.32 -0.31
94 AT4G29350 profilin 2 profilin 2, PROFILIN 2, PROFILIN 2 -0.58 0.29 -0.32
95 AT4G23200 cysteine-rich RLK (RECEPTOR-like protein kinase) 12 cysteine-rich RLK (RECEPTOR-like
protein kinase) 12		 -0.58 0.3 -0.33
96 AT4G03140 NAD(P)-binding Rossmann-fold superfamily protein 0.58 0.3 -0.35
97 AT3G62800 double-stranded-RNA-binding protein 4 double-stranded-RNA-binding
protein 4		 0.58 0.32 -0.31
98 AT5G18250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G04040.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.58 0.31 -0.32
99 AT4G03180 CONTAINS InterPro DOMAIN/s: rRNA processing
(InterPro:IPR013730); Has 898 Blast hits to 687 proteins in
142 species: Archae - 2; Bacteria - 28; Metazoa - 200;
Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes -
506 (source: NCBI BLink).		 -0.58 0.31 -0.31
100 AT4G13440 Calcium-binding EF-hand family protein -0.58 0.31 -0.33
101 AT5G25900 GA requiring 3 ARABIDOPSIS THALIANA ENT-KAURENE
OXIDASE 1, CYTOCHROME P450 701 A3,
GA requiring 3		 0.58 0.32 -0.31
102 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 0.58 0.31 -0.31
103 AT3G19860 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 121 0.58 0.3 -0.33
104 AT1G21080 DNAJ heat shock N-terminal domain-containing protein -0.58 0.31 -0.31
105 AT5G15150 homeobox 3 homeobox 3, ATHB3, HOMEOBOX FROM
ARABIDOPSIS THALIANA 7, homeobox 3		 -0.58 0.33 -0.3
106 AT5G66880 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 SUCROSE NONFERMENTING 1
(SNF1)-RELATED PROTEIN KINASE 2-3,
sucrose nonfermenting
1(SNF1)-related protein kinase
2.3, SRK2I		 0.57 0.31 -0.32
107 AT1G19025 DNA repair metallo-beta-lactamase family protein 0.57 0.32 -0.33
108 AT2G35720 DNAJ heat shock N-terminal domain-containing protein ORIENTATION UNDER VERY LOW
FLUENCES OF LIGHT 1		 -0.57 0.31 -0.3
109 AT5G38890 Nucleic acid-binding, OB-fold-like protein -0.57 0.32 -0.31
110 AT5G14390 alpha/beta-Hydrolases superfamily protein 0.57 0.34 -0.29
111 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.57 0.31 -0.33
112 AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase -0.57 0.3 -0.3
113 AT1G31650 RHO guanyl-nucleotide exchange factor 14 ATROPGEF14, RHO guanyl-nucleotide
exchange factor 14		 0.57 0.33 -0.33
114 AT5G18970 AWPM-19-like family protein -0.57 0.3 -0.32
115 AT4G34030 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase 0.55 0.29 -0.32
116 AT4G27060 ARM repeat superfamily protein CONVOLUTA, SPIRAL 2, TORTIFOLIA 1 0.55 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
117 C0226 Raffinose pentahydrate D-(+)-Raffinose pentahydrate - galactolipid biosynthesis suppression,
polysaccharide biosynthesis 		-0.59 0.31 -0.31