AT5G05680 : EMBRYO DEFECTIVE 2789
Query Information
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AGICode AT5G05680
Description nuclear pore complex protein-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G05680 nuclear pore complex protein-related EMBRYO DEFECTIVE 2789, MODIFIER OF
SNC1,7		 1 0.3 -0.3
2 AT4G14680 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS3 -0.71 0.32 -0.3
3 AT5G67150 HXXXD-type acyl-transferase family protein -0.7 0.33 -0.31
4 AT5G50350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.32 -0.32
5 AT3G17120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits
to 67 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.34 -0.31
6 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 0.66 0.34 -0.34
7 AT3G22890 ATP sulfurylase 1 ATP sulfurylase 1 -0.66 0.33 -0.31
8 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein -0.66 0.31 -0.32
9 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 -0.65 0.28 -0.32
10 AT1G22140 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.65 0.33 -0.32
11 AT5G42950 GYF domain-containing protein 0.64 0.33 -0.31
12 AT4G23840 Leucine-rich repeat (LRR) family protein 0.64 0.3 -0.31
13 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.3 -0.3
14 AT3G62240 RING/U-box superfamily protein 0.62 0.31 -0.32
15 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.31
16 AT4G01900 GLNB1 homolog GLNB1 homolog, PII -0.62 0.31 -0.29
17 AT3G18295 Protein of unknown function (DUF1639) -0.62 0.32 -0.34
18 AT4G23730 Galactose mutarotase-like superfamily protein -0.61 0.31 -0.3
19 AT5G56240 BEST Arabidopsis thaliana protein match is: hapless 8
(TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.61 0.31 -0.33
20 AT1G77180 chromatin protein family SKIP 0.61 0.3 -0.31
21 AT3G20390 endoribonuclease L-PSP family protein -0.61 0.31 -0.3
22 AT1G53650 CTC-interacting domain 8 CTC-interacting domain 8 -0.6 0.3 -0.35
23 AT5G52630 mitochondrial RNAediting factor 1 mitochondrial RNAediting factor 1 0.6 0.33 -0.32
24 AT1G44790 ChaC-like family protein -0.6 0.32 -0.31
25 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 0.59 0.33 -0.33
26 AT1G21440 Phosphoenolpyruvate carboxylase family protein -0.59 0.31 -0.32
27 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.33
28 AT5G44720 Molybdenum cofactor sulfurase family protein -0.58 0.31 -0.31
29 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 0.58 0.33 -0.33
30 AT1G22050 membrane-anchored ubiquitin-fold protein 6 precursor membrane-anchored ubiquitin-fold
protein 6 precursor		 -0.58 0.31 -0.32
31 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.58 0.32 -0.32
32 AT4G20910 double-stranded RNA binding protein-related / DsRBD
protein-related		 CORYMBOSA 2, HUA ENHANCER 1 0.58 0.32 -0.31
33 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2		 -0.57 0.31 -0.33
34 AT2G47300 ribonuclease Ps 0.57 0.31 -0.33
35 AT1G14950 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.57 0.31 -0.31
36 AT3G08500 myb domain protein 83 myb domain protein 83, myb domain
protein 83		 -0.57 0.31 -0.32
37 AT2G02160 CCCH-type zinc finger family protein 0.57 0.31 -0.32
38 AT5G16190 cellulose synthase like A11 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE A11, cellulose
synthase like A11		 -0.57 0.34 -0.32
39 AT3G66652 fip1 motif-containing protein 0.57 0.32 -0.31
40 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 0.57 0.31 -0.31
41 AT3G01850 Aldolase-type TIM barrel family protein -0.57 0.32 -0.33
42 AT3G19120 PIF / Ping-Pong family of plant transposases 0.56 0.33 -0.29
43 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein 0.56 0.31 -0.31
44 AT4G16566 histidine triad nucleotide-binding 4 histidine triad nucleotide-binding
4		 -0.56 0.3 -0.29
45 AT1G18590 sulfotransferase 17 SULFOTRANSFERASE 17, ARABIDOPSIS
SULFOTRANSFERASE 5C,
sulfotransferase 17		 -0.56 0.31 -0.32
46 AT5G07570 glycine/proline-rich protein -0.56 0.32 -0.31
47 AT2G43550 Scorpion toxin-like knottin superfamily protein -0.56 0.32 -0.32
48 AT2G16640 multimeric translocon complex in the outer envelope
membrane 132		 MULTIMERIC TRANSLOCON COMPLEX IN
THE OUTER ENVELOPE MEMBRANE 132,
multimeric translocon complex in
the outer envelope membrane 132		 0.56 0.31 -0.34
49 AT5G46460 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.31 -0.28
50 AT5G18750 DNAJ heat shock N-terminal domain-containing protein 0.55 0.32 -0.31
51 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase 0.55 0.36 -0.33
52 AT4G24680 modifier of snc1 MODIFIER OF snc1 0.55 0.32 -0.32
53 AT5G65000 Nucleotide-sugar transporter family protein -0.55 0.32 -0.33
54 AT4G39940 APS-kinase 2 APS-kinase 2,
ADENOSINE-5'-PHOSPHOSULFATE (APS)
KINASE 2		 -0.55 0.33 -0.32
55 AT4G19890 Pentatricopeptide repeat (PPR-like) superfamily protein 0.55 0.31 -0.3
56 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 -0.55 0.33 -0.34
57 AT1G30910 Molybdenum cofactor sulfurase family protein -0.54 0.3 -0.29
58 AT1G24100 UDP-glucosyl transferase 74B1 UDP-glucosyl transferase 74B1 -0.54 0.31 -0.32
59 AT3G05130 BEST Arabidopsis thaliana protein match is: Prefoldin
chaperone subunit family protein (TAIR:AT5G27330.1); Has
171032 Blast hits to 82560 proteins in 3364 species: Archae
- 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365;
Plants - 9598; Viruses - 592; Other Eukaryotes - 39097
(source: NCBI BLink).		 0.54 0.31 -0.31
60 AT5G05560 E3 ubiquitin ligase, putative EMBRYO DEFECTIVE 2771 0.54 0.31 -0.31
61 AT4G15920 Nodulin MtN3 family protein AtSWEET17, SWEET17 -0.54 0.32 -0.33
62 AT4G02750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.31 -0.32
63 AT2G16380 Sec14p-like phosphatidylinositol transfer family protein -0.54 0.31 -0.3
64 AT1G11950 Transcription factor jumonji (jmjC) domain-containing
protein		 0.54 0.31 -0.33
65 AT1G80940 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.31 -0.32
66 AT1G69080 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.54 0.33 -0.33
67 AT1G67600 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 -0.53 0.31 -0.32
68 AT3G19400 Cysteine proteinases superfamily protein -0.53 0.32 -0.32
69 AT2G22370 unknown protein; Has 127 Blast hits to 127 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.53 0.3 -0.32
70 AT2G44930 Plant protein of unknown function (DUF247) -0.53 0.33 -0.33
71 AT1G63290 Aldolase-type TIM barrel family protein -0.53 0.31 -0.3
72 AT1G20290 SWI-SNF-related chromatin binding protein -0.53 0.29 -0.31
73 AT1G15410 aspartate-glutamate racemase family -0.53 0.33 -0.32
74 AT2G02050 NADH-ubiquinone oxidoreductase B18 subunit, putative -0.52 0.32 -0.32
75 AT3G16540 DegP protease 11 DegP protease 11 -0.52 0.31 -0.31
76 AT3G17380 TRAF-like family protein -0.52 0.32 -0.3
77 AT3G15170 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 54, ATNAC1, CUP-SHAPED
COTYLEDON1		 0.52 0.31 -0.31
78 AT1G22910 RNA-binding (RRM/RBD/RNP motifs) family protein -0.52 0.31 -0.31
79 AT2G02090 SNF2 domain-containing protein / helicase domain-containing
protein		 CHA19, CHROMATIN REMODELING 19,
ETL1		 0.52 0.32 -0.3
80 AT1G11220 Protein of unknown function (DUF761) 0.52 0.31 -0.32
81 AT3G28780 Protein of unknown function (DUF1216) 0.52 0.32 -0.33
82 AT2G02820 myb domain protein 88 myb domain protein 88, myb domain
protein 88		 -0.52 0.33 -0.31
83 AT3G16750 unknown protein; Has 4708 Blast hits to 1416 proteins in
195 species: Archae - 36; Bacteria - 1240; Metazoa - 1232;
Fungi - 406; Plants - 191; Viruses - 23; Other Eukaryotes -
1580 (source: NCBI BLink).		 -0.52 0.3 -0.32
84 AT1G04290 Thioesterase superfamily protein -0.52 0.3 -0.32
85 AT5G23650 Homeodomain-like transcriptional regulator 0.51 0.32 -0.31
86 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 -0.51 0.3 -0.31
87 AT1G60200 splicing factor PWI domain-containing protein / RNA
recognition motif (RRM)-containing protein		 0.51 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0173 MST_2301.7 - - - 0.72 0.43 -0.47
89 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		0.69 0.46 -0.43 C0001