AT5G05540 : small RNA degrading nuclease 2
Query Information
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AGICode AT5G05540
Description small RNA degrading nuclease 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G05540 small RNA degrading nuclease 2 small RNA degrading nuclease 2 1 0.31 -0.31
2 AT1G09090 respiratory burst oxidase homolog B respiratory burst oxidase homolog
B, ATRBOHB-BETA, respiratory burst
oxidase homolog B		 0.72 0.33 -0.31
3 AT4G37470 alpha/beta-Hydrolases superfamily protein -0.69 0.32 -0.31
4 AT5G26010 Protein phosphatase 2C family protein -0.68 0.31 -0.3
5 AT5G23840 MD-2-related lipid recognition domain-containing protein 0.68 0.32 -0.32
6 AT3G52920 Family of unknown function (DUF662) -0.67 0.32 -0.31
7 AT4G36860 LIM domain-containing protein DA1-RELATED PROTEIN 1 0.67 0.33 -0.31
8 AT3G57780 BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 3163 Blast
hits to 2460 proteins in 357 species: Archae - 16; Bacteria
- 291; Metazoa - 841; Fungi - 335; Plants - 248; Viruses -
72; Other Eukaryotes - 1360 (source: NCBI BLink).		 -0.66 0.3 -0.32
9 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7		 0.66 0.31 -0.31
10 AT4G16850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.29 -0.33
11 AT1G35580 cytosolic invertase 1 alkaline/neutral invertase G,
cytosolic invertase 1		 0.64 0.31 -0.32
12 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 0.63 0.31 -0.3
13 AT4G01030 pentatricopeptide (PPR) repeat-containing protein -0.63 0.32 -0.3
14 AT2G45920 U-box domain-containing protein 0.62 0.3 -0.32
15 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.33 -0.32
16 AT2G09910 transposable element gene -0.62 0.32 -0.33
17 AT1G64690 branchless trichome BRANCHLESS TRICHOMES -0.62 0.3 -0.31
18 AT1G69210 Uncharacterised protein family UPF0090 0.62 0.34 -0.3
19 AT5G23260 K-box region and MADS-box transcription factor family
protein 		ARABIDOPSIS BSISTER, AGAMOUS-like
32, TRANSPARENT TESTA16		 -0.62 0.32 -0.31
20 ATCG00490 ribulose-bisphosphate carboxylases RBCL -0.61 0.32 -0.28
21 AT4G39160 Homeodomain-like superfamily protein 0.61 0.3 -0.32
22 AT3G45860 cysteine-rich RLK (RECEPTOR-like protein kinase) 4 cysteine-rich RLK (RECEPTOR-like
protein kinase) 4		 -0.61 0.29 -0.31
23 AT5G08080 syntaxin of plants 132 ATSYP132, syntaxin of plants 132 0.61 0.31 -0.29
24 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily -0.6 0.32 -0.33
25 AT4G28520 cruciferin 3 CRUCIFERIN C, cruciferin 3 -0.59 0.3 -0.33
26 AT1G73360 homeodomain GLABROUS 11 HOMEODOMAIN GLABROUS 11, ENHANCED
DROUGHT TOLERANCE 1, homeodomain
GLABROUS 11		 -0.59 0.33 -0.31
27 AT1G13600 basic leucine-zipper 58 basic leucine-zipper 58, basic
leucine-zipper 58		 -0.59 0.3 -0.31
28 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 -0.59 0.32 -0.29
29 AT2G22850 basic leucine-zipper 6 basic leucine-zipper 6, basic
leucine-zipper 6		 0.59 0.32 -0.3
30 AT3G06300 P4H isoform 2 P4H isoform 2, prolyl
4-hydroxylase 2		 0.59 0.31 -0.31
31 AT1G16310 Cation efflux family protein -0.58 0.31 -0.33
32 AT3G03400 EF hand calcium-binding protein family -0.58 0.3 -0.32
33 AT5G47970 Aldolase-type TIM barrel family protein 0.58 0.31 -0.33
34 AT5G24410 6-phosphogluconolactonase 4 6-phosphogluconolactonase 4 0.58 0.31 -0.32
35 AT2G21140 proline-rich protein 2 proline-rich protein 2,
proline-rich protein 2		 -0.58 0.32 -0.32
36 AT5G42200 RING/U-box superfamily protein -0.58 0.33 -0.33
37 AT1G47885 Ribonuclease inhibitor 0.58 0.33 -0.31
38 AT3G55500 expansin A16 ATEXP16, expansin A16, ATHEXP
ALPHA 1.7, EXPANSIN 16, expansin
A16		 -0.57 0.31 -0.32
39 AT1G17810 beta-tonoplast intrinsic protein beta-tonoplast intrinsic protein -0.57 0.3 -0.33
40 AT3G15350 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.57 0.31 -0.32
41 AT5G43880 Protein of unknown function (DUF3741) -0.57 0.31 -0.3
42 ATCG00680 photosystem II reaction center protein B photosystem II reaction center
protein B		 -0.57 0.32 -0.32
43 AT5G41900 alpha/beta-Hydrolases superfamily protein -0.56 0.31 -0.31
44 AT3G51490 tonoplast monosaccharide transporter3 tonoplast monosaccharide
transporter3		 -0.56 0.32 -0.32
45 AT3G49700 1-aminocyclopropane-1-carboxylate synthase 9 1-aminocyclopropane-1-carboxylate
synthase 9, AtACS9, ETHYLENE
OVERPRODUCING 3		 0.56 0.33 -0.32
46 AT3G23680 F-box associated ubiquitination effector family protein -0.56 0.3 -0.31
47 AT1G71450 Integrase-type DNA-binding superfamily protein 0.56 0.33 -0.32
48 AT4G09430 Disease resistance protein (TIR-NBS-LRR class) family 0.56 0.29 -0.31
49 AT1G05510 Protein of unknown function (DUF1264) -0.56 0.34 -0.32
50 AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.56 0.32 -0.3
51 AT1G55760 BTB/POZ domain-containing protein -0.56 0.31 -0.3
52 AT5G16460 Putative adipose-regulatory protein (Seipin) -0.55 0.31 -0.3
53 AT2G33080 receptor like protein 28 receptor like protein 28, receptor
like protein 28		 -0.55 0.31 -0.32
54 AT1G34150 Pseudouridine synthase family protein 0.55 0.34 -0.34
55 AT1G69050 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.3 -0.31
56 AT1G42480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF3456
(InterPro:IPR021852); Has 177 Blast hits to 177 proteins in
59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi
- 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 0.55 0.33 -0.32
57 AT5G59845 Gibberellin-regulated family protein -0.55 0.31 -0.34
58 ATCG00190 RNA polymerase subunit beta RNA polymerase subunit beta -0.55 0.34 -0.33
59 AT4G27160 seed storage albumin 3 AT2S3, seed storage albumin 3 -0.55 0.32 -0.3
60 AT3G51710 D-mannose binding lectin protein with Apple-like
carbohydrate-binding domain		 -0.55 0.3 -0.32
61 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 -0.54 0.31 -0.31
62 AT5G65470 O-fucosyltransferase family protein -0.54 0.3 -0.33
63 AT1G31430 Pentatricopeptide repeat (PPR-like) superfamily protein -0.54 0.33 -0.33
64 ATCG00430 photosystem II reaction center protein G photosystem II reaction center
protein G		 -0.54 0.31 -0.31
65 AT4G36600 Late embryogenesis abundant (LEA) protein -0.54 0.32 -0.33
66 AT3G31410 transposable element gene 0.54 0.34 -0.32
67 AT2G14860 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.53 0.32 -0.32
68 AT2G33720 AP2/B3-like transcriptional factor family protein -0.53 0.3 -0.33
69 AT2G22250 aspartate aminotransferase aspartate aminotransferase,
ASPARTATE AMINOTRANSFERASE,
MATERNAL EFFECT EMBRYO ARREST 17		 0.53 0.32 -0.31
70 AT5G52290 shortage in chiasmata 1 SHORTAGE IN CHIASMATA 1 -0.53 0.3 -0.3
71 AT4G38800 methylthioadenosine nucleosidase 1 ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 1, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
1, METHYLTHIOADENOSINE
NUCLEOSIDASE 1,
methylthioadenosine nucleosidase 1		 0.53 0.32 -0.32
72 AT1G48070 Thioredoxin superfamily protein 0.53 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
73 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.63 0.44 -0.5 C0018