AT5G05560 : EMBRYO DEFECTIVE 2771
Query Information
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AGICode AT5G05560
Description E3 ubiquitin ligase, putative
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G05560 E3 ubiquitin ligase, putative EMBRYO DEFECTIVE 2771 1 0.32 -0.32
2 AT5G17440 LUC7 related protein 0.71 0.31 -0.31
3 AT3G66652 fip1 motif-containing protein 0.69 0.32 -0.3
4 AT1G79870 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 -0.68 0.29 -0.32
5 AT1G79950 RAD3-like DNA-binding helicase protein 0.68 0.33 -0.29
6 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.3 -0.33
7 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 0.66 0.29 -0.33
8 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 0.64 0.31 -0.3
9 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 0.64 0.31 -0.33
10 AT4G01900 GLNB1 homolog GLNB1 homolog, PII -0.64 0.3 -0.3
11 AT5G06610 Protein of unknown function (DUF620) -0.63 0.32 -0.31
12 AT5G15700 DNA/RNA polymerases superfamily protein 0.63 0.32 -0.33
13 AT3G07860 Ubiquitin-like superfamily protein 0.63 0.31 -0.31
14 AT5G48120 ARM repeat superfamily protein 0.63 0.32 -0.31
15 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 0.62 0.32 -0.34
16 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.62 0.31 -0.32
17 AT5G52630 mitochondrial RNAediting factor 1 mitochondrial RNAediting factor 1 0.62 0.33 -0.29
18 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.61 0.3 -0.31
19 AT1G27900 RNA helicase family protein 0.61 0.31 -0.32
20 AT5G02560 histone H2A 12 histone H2A 12 -0.6 0.31 -0.32
21 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 -0.6 0.32 -0.3
22 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.31 -0.32
23 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase 0.59 0.3 -0.32
24 AT2G32560 F-box family protein -0.59 0.31 -0.32
25 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.59 0.31 -0.32
26 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein 0.58 0.32 -0.32
27 AT2G02090 SNF2 domain-containing protein / helicase domain-containing
protein		 CHA19, CHROMATIN REMODELING 19,
ETL1		 0.58 0.33 -0.31
28 AT3G52900 Family of unknown function (DUF662) -0.58 0.3 -0.32
29 AT5G37370 PRP38 family protein ATSRL1 0.58 0.3 -0.31
30 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein -0.58 0.31 -0.34
31 AT5G37710 alpha/beta-Hydrolases superfamily protein 0.58 0.3 -0.31
32 AT4G21710 DNA-directed RNA polymerase family protein EMBRYO DEFECTIVE 1989, NRPB2, RPB2 0.58 0.3 -0.32
33 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 -0.57 0.33 -0.31
34 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 -0.57 0.31 -0.31
35 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.29 -0.31
36 AT3G10070 TBP-associated factor 12 TBP-associated factor 12,
TATA-ASSOCIATED FACTOR II 58		 0.57 0.32 -0.31
37 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 -0.57 0.3 -0.31
38 AT4G17610 tRNA/rRNA methyltransferase (SpoU) family protein 0.56 0.31 -0.31
39 AT2G27760 tRNAisopentenyltransferase 2 tRNAisopentenyltransferase 2,
IPPT, tRNAisopentenyltransferase 2		 0.56 0.3 -0.32
40 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.56 0.29 -0.32
41 AT2G46225 ABI-1-like 1 ABI-1-like 1 -0.56 0.3 -0.31
42 AT3G31910 Domain of unknown function (DUF1985) 0.56 0.3 -0.32
43 AT1G42650 transposable element gene 0.55 0.33 -0.32
44 AT5G51680 hydroxyproline-rich glycoprotein family protein 0.55 0.3 -0.31
45 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.55 0.32 -0.31
46 AT3G50750 BES1/BZR1 homolog 1 BES1/BZR1 homolog 1 -0.55 0.33 -0.32
47 AT2G38280 AMP deaminase, putative / myoadenylate deaminase, putative ADENOSINE 5'-MONOPHOSPHATE
DEAMINASE, EMBRYONIC FACTOR1		 0.55 0.29 -0.29
48 AT2G16380 Sec14p-like phosphatidylinositol transfer family protein -0.54 0.3 -0.31
49 AT5G05680 nuclear pore complex protein-related EMBRYO DEFECTIVE 2789, MODIFIER OF
SNC1,7		 0.54 0.32 -0.33
50 AT4G23840 Leucine-rich repeat (LRR) family protein 0.53 0.32 -0.32
51 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 0.53 0.31 -0.3
52 AT1G79630 Protein phosphatase 2C family protein 0.53 0.3 -0.32
53 AT3G14460 LRR and NB-ARC domains-containing disease resistance
protein		 -0.52 0.31 -0.32
54 AT2G30240 Cation/hydrogen exchanger family protein ATCHX13, CATION/H+ EXCHANGER 13 -0.52 0.34 -0.36
55 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 -0.51 0.29 -0.32
56 AT1G77020 DNAJ heat shock N-terminal domain-containing protein -0.51 0.31 -0.31
57 AT3G02170 longifolia2 LONGIFOLIA2 -0.5 0.31 -0.31
58 AT5G13990 exocyst subunit exo70 family protein C2 exocyst subunit exo70 family
protein C2, exocyst subunit exo70
family protein C2		 -0.5 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
59 C0213 PR_MST_2410.2 - - - 0.62 0.46 -0.49