AGICode | AT5G05030 |
Description | Protein of Unknown Function (DUF239) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G05030 | Protein of Unknown Function (DUF239) | 1 | 0.31 | -0.3 | |||
2 | AT5G47340 | alpha/beta-Hydrolases superfamily protein | 0.72 | 0.31 | -0.32 | |||
3 | AT1G29710 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.61 | 0.31 | -0.29 | |||
4 | AT1G64250 | transposable element gene | 0.58 | 0.3 | -0.33 | |||
5 | AT2G02340 | phloem protein 2-B8 | phloem protein 2-B8, phloem protein 2-B8 |
0.58 | 0.32 | -0.3 | ||
6 | AT1G29770 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.58 | 0.31 | -0.31 | |||
7 | AT2G45940 | Protein of unknown function (DUF295) | 0.56 | 0.33 | -0.32 | |||
8 | AT4G08670 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.55 | 0.32 | -0.3 | |||
9 | AT1G48660 | Auxin-responsive GH3 family protein | -0.52 | 0.32 | -0.31 | |||
10 | AT2G10490 | transposable element gene | 0.52 | 0.3 | -0.32 | |||
11 | AT4G04070 | transposable element gene | 0.52 | 0.31 | -0.31 | |||
12 | AT4G04690 | F-box and associated interaction domains-containing protein | 0.52 | 0.33 | -0.34 | |||
13 | AT3G63340 | Protein phosphatase 2C family protein | 0.52 | 0.3 | -0.32 | |||
14 | AT3G29330 | unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: stem, embryo; EXPRESSED DURING: D bilateral stage. |
-0.52 | 0.31 | -0.3 | |||
15 | AT1G34575 | FAD-binding Berberine family protein | 0.51 | 0.31 | -0.3 | |||
16 | AT5G24440 | CTC-interacting domain 13 | CTC-interacting domain 13 | 0.51 | 0.32 | -0.31 | ||
17 | AT4G40020 | Myosin heavy chain-related protein | 0.51 | 0.33 | -0.33 | |||
18 | AT1G50800 | BEST Arabidopsis thaliana protein match is: Plant mobile domain protein family (TAIR:AT1G50790.1); Has 38 Blast hits to 34 proteins in 9 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 2; Plants - 26; Viruses - 1; Other Eukaryotes - 3 (source: NCBI BLink). |
0.51 | 0.3 | -0.32 | |||
19 | AT3G28360 | P-glycoprotein 16 | ATP-binding cassette B16, P-glycoprotein 16 |
0.51 | 0.28 | -0.31 | ||
20 | AT3G43820 | pseudogene, copper amine oxidase protein family, similar to SP|Q43077 Amine oxidase (copper-containing) precursor (EC 1.4.3.6) {Pisum sativum}; contains Pfam profile PF01179: Copper amine oxidase, enzyme domain; blastp match of 57% identity and 2.6e-48 P-value to GP|5733089|gb|AAD49420.1|AF172681_1|AF172681 amine oxidase {Canavalia lineata} |
-0.5 | 0.3 | -0.33 | |||
21 | AT2G05090 | transposable element gene | 0.5 | 0.31 | -0.35 | |||
22 | AT3G25090 | F-box associated ubiquitination effector family protein | -0.49 | 0.31 | -0.31 | |||
23 | AT3G46380 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.49 | 0.3 | -0.33 | |||
24 | AT2G11370 | transposable element gene | 0.49 | 0.32 | -0.31 | |||
25 | AT3G44900 | cation/H+ exchanger 4 | cation/H+ exchanger 4, cation/H+ exchanger 4 |
0.49 | 0.31 | -0.32 | ||
26 | AT5G22970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.49 | 0.32 | -0.31 | |||
27 | AT4G26390 | Pyruvate kinase family protein | 0.49 | 0.31 | -0.32 | |||
28 | AT3G20980 | Gag-Pol-related retrotransposon family protein | 0.49 | 0.32 | -0.32 | |||
29 | AT2G04990 | transposable element gene | -0.49 | 0.32 | -0.33 | |||
30 | AT1G24938 | transposable element gene | -0.48 | 0.3 | -0.31 | |||
31 | AT2G40030 | nuclear RNA polymerase D1B | ATNRPD1B, DEFECTIVE IN MERISTEM SILENCING 5, DRD3, nuclear RNA polymerase D1B, NRPE1 |
0.48 | 0.32 | -0.3 | ||
32 | AT5G53680 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.48 | 0.32 | -0.32 | |||
33 | AT2G23770 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein |
-0.48 | 0.33 | -0.31 | |||
34 | AT3G30830 | transposable element gene | 0.48 | 0.3 | -0.32 | |||
35 | AT2G16520 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.32 | -0.31 | |||
36 | AT1G23990 | transposable element gene | 0.48 | 0.33 | -0.32 | |||
37 | AT1G14110 | fucosyltransferase 9 | ATFUT9, fucosyltransferase 9 | -0.47 | 0.32 | -0.3 | ||
38 | AT2G40790 | C-terminal cysteine residue is changed to a serine 2 | C-terminal cysteine residue is changed to a serine 2, C-terminal cysteine residue is changed to a serine 2 |
0.47 | 0.32 | -0.28 | ||
39 | AT2G40530 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.47 | 0.33 | -0.32 | |||
40 | AT1G79840 | HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain |
GLABRA 2 | 0.47 | 0.32 | -0.32 | ||
41 | AT3G60920 | CONTAINS InterPro DOMAIN/s: Beige/BEACH (InterPro:IPR000409); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.1); Has 1795 Blast hits to 1563 proteins in 214 species: Archae - 2; Bacteria - 29; Metazoa - 830; Fungi - 160; Plants - 230; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). |
0.46 | 0.32 | -0.31 | |||
42 | AT3G48950 | Pectin lyase-like superfamily protein | 0.46 | 0.3 | -0.33 | |||
43 | AT1G76770 | HSP20-like chaperones superfamily protein | 0.46 | 0.32 | -0.32 | |||
44 | AT5G54570 | beta glucosidase 41 | beta glucosidase 41 | 0.46 | 0.34 | -0.33 | ||
45 | AT2G02550 | PIN domain-like family protein | 0.45 | 0.34 | -0.29 | |||
46 | AT5G40490 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.45 | 0.33 | -0.33 | |||
47 | AT4G07970 | transposable element gene | 0.44 | 0.33 | -0.33 | |||
48 | AT5G47010 | RNA helicase, putative | ATUPF1, LOW-LEVEL BETA-AMYLASE 1, UPF1 |
0.43 | 0.31 | -0.32 | ||
49 | AT5G65080 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 68, MADS AFFECTING FLOWERING 5 |
-0.43 | 0.31 | -0.31 | ||
50 | AT3G42770 | F-box/RNI-like/FBD-like domains-containing protein | -0.43 | 0.33 | -0.3 | |||
51 | AT1G43000 | PLATZ transcription factor family protein | 0.42 | 0.32 | -0.3 | |||
52 | AT1G36620 | transposable element gene | -0.42 | 0.28 | -0.3 | |||
53 | AT5G35090 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.42 | 0.32 | -0.33 | |||
54 | AT4G34690 | unknown protein; Has 9 Blast hits to 9 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.42 | 0.3 | -0.31 | |||
55 | AT1G55040 | zinc finger (Ran-binding) family protein | 0.42 | 0.31 | -0.31 | |||
56 | AT3G06870 | proline-rich family protein | -0.4 | 0.31 | -0.33 | |||
57 | AT5G28530 | FAR1-related sequence 10 | FAR1-related sequence 10 | -0.39 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
58 | C0108 | GMP | - | GMP | guanine and guanosine salvage II, guanosine nucleotides degradation I, guanosine nucleotides degradation II, guanine and guanosine salvage III, purine nucleotides de novo biosynthesis II, purine nucleotide metabolism (phosphotransfer and nucleotide modification) |
0.75 | 0.43 | -0.45 |