AGICode | AT5G05080 |
Description | ubiquitin-conjugating enzyme 22 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G05080 | ubiquitin-conjugating enzyme 22 | ATUBC22, ubiquitin-conjugating enzyme 22 |
1 | 0.32 | -0.32 | ||
2 | AT5G02550 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.31 | -0.33 | |||
3 | AT3G46360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44755.1); Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.31 | -0.3 | |||
4 | AT1G09550 | Pectinacetylesterase family protein | -0.7 | 0.32 | -0.3 | |||
5 | AT3G60790 | F-box family protein | -0.7 | 0.32 | -0.31 | |||
6 | AT2G18190 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.7 | 0.33 | -0.31 | |||
7 | AT4G12540 | unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.32 | -0.31 | |||
8 | AT4G39860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.69 | 0.31 | -0.34 | |||
9 | AT1G53690 | DNA directed RNA polymerase, 7 kDa subunit | 0.69 | 0.32 | -0.29 | |||
10 | AT4G17190 | farnesyl diphosphate synthase 2 | farnesyl diphosphate synthase 2 | 0.68 | 0.32 | -0.31 | ||
11 | AT5G41330 | BTB/POZ domain with WD40/YVTN repeat-like protein | -0.67 | 0.32 | -0.31 | |||
12 | AT4G38680 | glycine rich protein 2 | ARABIDOPSIS THALIANA COLD SHOCK PROTEIN 2, COLD SHOCK DOMAIN PROTEIN 2, COLD SHOCK PROTEIN 2, glycine rich protein 2 |
0.67 | 0.33 | -0.34 | ||
13 | AT5G28590 | DNA-binding family protein | -0.67 | 0.31 | -0.31 | |||
14 | AT3G26160 | cytochrome P450, family 71, subfamily B, polypeptide 17 | cytochrome P450, family 71, subfamily B, polypeptide 17 |
-0.67 | 0.3 | -0.3 | ||
15 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
-0.67 | 0.33 | -0.35 | |||
16 | AT5G22540 | Plant protein of unknown function (DUF247) | -0.66 | 0.32 | -0.33 | |||
17 | AT1G68480 | C2H2 and C2HC zinc fingers superfamily protein | JAGGED | -0.66 | 0.32 | -0.32 | ||
18 | AT3G28120 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
-0.66 | 0.31 | -0.31 | |||
19 | AT2G40220 | Integrase-type DNA-binding superfamily protein | ABA INSENSITIVE 4, ATABI4, GLUCOSE INSENSITIVE 6, IMPAIRED SUCROSE INDUCTION 3, SALOBRENO 5, SUGAR-INSENSITIVE 5, SUCROSE UNCOUPLED 6 |
-0.66 | 0.33 | -0.31 | ||
20 | AT3G51520 | diacylglycerol acyltransferase family | 0.65 | 0.33 | -0.3 | |||
21 | AT3G42700 | transposable element gene | -0.65 | 0.32 | -0.32 | |||
22 | AT1G16710 | histone acetyltransferase of the CBP family 12 | histone acetyltransferase of the CBP family 12 |
-0.65 | 0.32 | -0.32 | ||
23 | AT3G55460 | SC35-like splicing factor 30 | SC35-like splicing factor 30, SC35-like splicing factor 30 |
0.65 | 0.33 | -0.33 | ||
24 | AT5G24560 | phloem protein 2-B12 | phloem protein 2-B12, phloem protein 2-B12 |
-0.65 | 0.31 | -0.32 | ||
25 | AT1G34210 | somatic embryogenesis receptor-like kinase 2 | ATSERK2, somatic embryogenesis receptor-like kinase 2 |
-0.64 | 0.32 | -0.32 | ||
26 | AT3G57860 | UV-B-insensitive 4-like | GIGAS CELL 1, OMISSION OF SECOND DIVISION, UV-B-insensitive 4-like |
0.64 | 0.32 | -0.3 | ||
27 | AT5G05670 | signal recognition particle binding | 0.64 | 0.32 | -0.33 | |||
28 | AT5G15530 | biotin carboxyl carrier protein 2 | biotin carboxyl carrier protein 2, CAC1-B |
0.64 | 0.29 | -0.32 | ||
29 | AT5G11360 | Interleukin-1 receptor-associated kinase 4 protein | -0.63 | 0.31 | -0.32 | |||
30 | AT3G07880 | Immunoglobulin E-set superfamily protein | SUPERCENTIPEDE1 | 0.63 | 0.32 | -0.33 | ||
31 | AT4G22300 | carboxylesterases | SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 |
0.63 | 0.33 | -0.31 | ||
32 | AT2G19130 | S-locus lectin protein kinase family protein | -0.63 | 0.31 | -0.32 | |||
33 | AT5G51870 | AGAMOUS-like 71 | AGAMOUS-like 71 | -0.63 | 0.34 | -0.31 | ||
34 | AT3G17330 | evolutionarily conserved C-terminal region 6 | evolutionarily conserved C-terminal region 6 |
0.63 | 0.32 | -0.34 | ||
35 | AT5G51690 | 1-amino-cyclopropane-1-carboxylate synthase 12 | 1-amino-cyclopropane-1-carboxylate synthase 12 |
-0.63 | 0.32 | -0.33 | ||
36 | AT5G13380 | Auxin-responsive GH3 family protein | -0.63 | 0.32 | -0.32 | |||
37 | AT5G12180 | calcium-dependent protein kinase 17 | calcium-dependent protein kinase 17 |
-0.63 | 0.3 | -0.32 | ||
38 | AT4G13080 | xyloglucan endotransglucosylase/hydrolase 1 | xyloglucan endotransglucosylase/hydrolase 1 |
-0.62 | 0.31 | -0.31 | ||
39 | AT5G41850 | alpha/beta-Hydrolases superfamily protein | -0.62 | 0.34 | -0.3 | |||
40 | AT3G47530 | Pentatricopeptide repeat (PPR) superfamily protein | -0.62 | 0.32 | -0.33 | |||
41 | AT3G59410 | protein kinase family protein | ARABIDOPSIS THALIANA GENERAL CONTROL NON-REPRESSIBLE 2, GENERAL CONTROL NON-REPRESSIBLE 2 |
-0.62 | 0.31 | -0.31 | ||
42 | AT2G26420 | 1-phosphatidylinositol-4-phosphate 5-kinase 3 | 1-phosphatidylinositol-4-phosphate 5-kinase 3 |
0.62 | 0.33 | -0.31 | ||
43 | AT1G06760 | winged-helix DNA-binding transcription factor family protein |
0.62 | 0.32 | -0.29 | |||
44 | AT1G48330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.31 | -0.29 | |||
45 | AT5G04200 | metacaspase 9 | metacaspase 9, metacaspase 2f, metacaspase 9, metacaspase 2f |
0.61 | 0.33 | -0.33 | ||
46 | AT4G11880 | AGAMOUS-like 14 | AGAMOUS-like 14 | 0.61 | 0.33 | -0.31 | ||
47 | AT5G42400 | SET domain protein 25 | ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 |
-0.61 | 0.32 | -0.3 | ||
48 | AT2G26280 | CTC-interacting domain 7 | CTC-interacting domain 7 | -0.61 | 0.31 | -0.34 | ||
49 | AT1G54140 | TATA binding protein associated factor 21kDa subunit | TBP-ASSOCIATED FACTOR 9, TATA binding protein associated factor 21kDa subunit |
0.61 | 0.33 | -0.31 | ||
50 | AT2G28680 | RmlC-like cupins superfamily protein | -0.61 | 0.32 | -0.34 | |||
51 | AT2G23800 | geranylgeranyl pyrophosphate synthase 2 | geranylgeranyl pyrophosphate synthase 2, GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5 |
0.61 | 0.31 | -0.3 | ||
52 | AT2G21770 | cellulose synthase A9 | CESA09, cellulose synthase A9 | -0.61 | 0.31 | -0.31 | ||
53 | AT4G10820 | F-box family protein | -0.61 | 0.3 | -0.32 | |||
54 | ATCG00080 | photosystem II reaction center protein I | photosystem II reaction center protein I |
-0.61 | 0.31 | -0.32 | ||
55 | AT5G56320 | expansin A14 | ATEXP14, expansin A14, ATHEXP ALPHA 1.5, EXPANSIN 14, expansin A14 |
0.61 | 0.33 | -0.32 | ||
56 | AT1G50910 | unknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink). |
-0.6 | 0.31 | -0.33 | |||
57 | AT1G49150 | unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.32 | |||
58 | AT5G62800 | Protein with RING/U-box and TRAF-like domains | -0.6 | 0.31 | -0.32 | |||
59 | AT3G58280 | Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain |
-0.6 | 0.33 | -0.32 | |||
60 | AT5G24280 | gamma-irradiation and mitomycin c induced 1 | GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 |
-0.6 | 0.3 | -0.32 | ||
61 | AT1G54790 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.6 | 0.31 | -0.32 | |||
62 | AT1G11040 | HSP40/DnaJ peptide-binding protein | 0.6 | 0.3 | -0.31 | |||
63 | AT4G33870 | Peroxidase superfamily protein | -0.6 | 0.3 | -0.33 | |||
64 | AT2G35460 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.6 | 0.31 | -0.3 | |||
65 | AT1G48220 | Protein kinase superfamily protein | -0.6 | 0.32 | -0.32 | |||
66 | AT2G18820 | transposable element gene | -0.59 | 0.31 | -0.32 | |||
67 | AT4G27300 | S-locus lectin protein kinase family protein | -0.59 | 0.3 | -0.32 | |||
68 | AT2G39520 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.33 | -0.31 | |||
69 | AT4G30050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.3 | -0.32 | |||
70 | AT2G36485 | ENTH/VHS family protein | 0.59 | 0.32 | -0.32 | |||
71 | AT1G56380 | Mitochondrial transcription termination factor family protein |
-0.59 | 0.33 | -0.31 | |||
72 | AT1G14750 | Cyclin family protein | SOLO DANCERS | 0.59 | 0.32 | -0.31 | ||
73 | AT1G52240 | RHO guanyl-nucleotide exchange factor 11 | ATROPGEF11, phytochrome interacting RopGEF 1, RHO guanyl-nucleotide exchange factor 11 |
0.59 | 0.3 | -0.33 | ||
74 | AT4G38000 | DNA binding with one finger 4.7 | DNA binding with one finger 4.7 | -0.59 | 0.31 | -0.31 | ||
75 | AT5G45920 | SGNH hydrolase-type esterase superfamily protein | 0.59 | 0.33 | -0.33 | |||
76 | AT3G06130 | Heavy metal transport/detoxification superfamily protein | 0.59 | 0.32 | -0.31 | |||
77 | AT2G27900 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
-0.59 | 0.3 | -0.32 | |||
78 | AT3G14880 | BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to 560 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.3 | -0.33 | |||
79 | AT5G39785 | Protein of unknown function (DUF1666) | -0.58 | 0.33 | -0.33 | |||
80 | AT3G05020 | acyl carrier protein 1 | ACYL CARRIER PROTEIN, acyl carrier protein 1 |
0.58 | 0.3 | -0.31 | ||
81 | AT2G16190 | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.58 | 0.33 | -0.32 | |||
82 | AT4G18410 | transposable element gene | -0.58 | 0.29 | -0.29 | |||
83 | AT3G44210 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits to 15 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
84 | AT4G13820 | Leucine-rich repeat (LRR) family protein | -0.57 | 0.28 | -0.32 | |||
85 | AT5G49070 | 3-ketoacyl-CoA synthase 21 | 3-ketoacyl-CoA synthase 21 | -0.57 | 0.34 | -0.31 | ||
86 | AT3G56390 | BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 55 (TAIR:AT2G40740.2); Has 12 Blast hits to 12 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.34 | |||
87 | AT5G02920 | F-box/RNI-like superfamily protein | -0.57 | 0.3 | -0.31 | |||
88 | AT1G27990 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.57 | 0.3 | -0.33 | |||
89 | AT1G11080 | serine carboxypeptidase-like 31 | serine carboxypeptidase-like 31 | 0.57 | 0.3 | -0.32 | ||
90 | AT5G01550 | lectin receptor kinase a4.1 | lectin receptor kinase a4.1 | -0.57 | 0.32 | -0.32 | ||
91 | AT2G43160 | ENTH/VHS family protein | -0.57 | 0.32 | -0.33 | |||
92 | AT3G17160 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 54259 Blast hits to 25265 proteins in 1209 species: Archae - 350; Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants - 3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI BLink). |
0.57 | 0.33 | -0.33 | |||
93 | AT3G28430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
-0.56 | 0.31 | -0.32 | |||
94 | AT4G03700 | transposable element gene | -0.56 | 0.32 | -0.28 | |||
95 | AT3G14020 | nuclear factor Y, subunit A6 | nuclear factor Y, subunit A6 | -0.56 | 0.32 | -0.31 | ||
96 | AT1G28375 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.3 | -0.32 | |||
97 | AT2G10050 | transposable element gene | -0.56 | 0.31 | -0.3 | |||
98 | AT1G13200 | F-box and associated interaction domains-containing protein | -0.56 | 0.32 | -0.32 | |||
99 | AT3G59610 | F-box family protein / jacalin lectin family protein | -0.56 | 0.32 | -0.31 | |||
100 | AT1G26820 | ribonuclease 3 | ribonuclease 3 | 0.56 | 0.31 | -0.31 | ||
101 | AT1G03457 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.56 | 0.32 | -0.31 | |||
102 | AT4G22250 | RING/U-box superfamily protein | 0.56 | 0.32 | -0.3 | |||
103 | AT1G55220 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.31 | -0.3 | |||
104 | AT1G32810 | RING/FYVE/PHD zinc finger superfamily protein | -0.56 | 0.32 | -0.31 | |||
105 | AT2G37880 | Protein of unknown function, DUF617 | -0.56 | 0.3 | -0.31 | |||
106 | AT1G04650 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.55 | 0.32 | -0.32 | |||
107 | AT4G35350 | xylem cysteine peptidase 1 | xylem cysteine peptidase 1 | 0.55 | 0.31 | -0.31 | ||
108 | AT1G61550 | S-locus lectin protein kinase family protein | 0.55 | 0.31 | -0.33 | |||
109 | AT5G63620 | GroES-like zinc-binding alcohol dehydrogenase family protein |
0.55 | 0.32 | -0.31 | |||
110 | AT1G05860 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 101 Blast hits to 100 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
0.55 | 0.3 | -0.31 | |||
111 | AT4G00560 | NAD(P)-binding Rossmann-fold superfamily protein | 0.54 | 0.31 | -0.32 | |||
112 | AT5G63950 | chromatin remodeling 24 | chromatin remodeling 24 | 0.54 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
113 | C0136 | Lactic acid | D,L-Lactic acid | Lactate | pyruvate fermentation to lactate | 0.76 | 0.42 | -0.46 |