AT5G04940 : SU(VAR)3-9 homolog 1
Query Information
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AGICode AT5G04940
Description SU(VAR)3-9 homolog 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G04940 SU(VAR)3-9 homolog 1 SU(VAR)3-9 homolog 1 1 0.33 -0.34
2 AT4G04340 ERD (early-responsive to dehydration stress) family protein 0.81 0.34 -0.32
3 AT1G01420 UDP-glucosyl transferase 72B3 UDP-glucosyl transferase 72B3 0.79 0.32 -0.3
4 AT4G04330 Chaperonin-like RbcX protein AtRbcX1, homologue of
cyanobacterial RbcX 1		 0.79 0.32 -0.3
5 AT3G12280 retinoblastoma-related 1 RETINOBLASTOMA-RELATED PROTEIN 1,
RB, RETINOBLASTOMA 1,
RETINOBLASTOMA-RELATED,
retinoblastoma-related 1		 0.79 0.31 -0.31
6 AT5G55990 calcineurin B-like protein 2 ATCBL2, calcineurin B-like protein
2		 0.78 0.32 -0.31
7 AT3G55760 unknown protein; LOCATED IN: chloroplast stroma,
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast
hits to 125 proteins in 40 species: Archae - 0; Bacteria -
3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 0.77 0.32 -0.3
8 AT4G27520 early nodulin-like protein 2 AtENODL2, early nodulin-like
protein 2		 0.77 0.32 -0.31
9 AT1G71710 DNAse I-like superfamily protein 0.76 0.3 -0.29
10 AT1G01610 glycerol-3-phosphate acyltransferase 4 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 4,
glycerol-3-phosphate
acyltransferase 4		 0.76 0.3 -0.29
11 AT4G14605 Mitochondrial transcription termination factor family
protein		 0.76 0.32 -0.31
12 AT2G35960 NDR1/HIN1-like 12 NDR1/HIN1-like 12 0.75 0.32 -0.33
13 AT3G02250 O-fucosyltransferase family protein 0.75 0.32 -0.33
14 AT4G30650 Low temperature and salt responsive protein family 0.75 0.32 -0.32
15 AT3G48460 GDSL-like Lipase/Acylhydrolase superfamily protein 0.75 0.32 -0.32
16 AT2G15970 cold regulated 413 plasma membrane 1 ARABIDOPSIS THALIANA
COLD-REGULATED413 PLASMA MEMBRANE
1, CYCLOPHILLIN 19, cold regulated
413 plasma membrane 1, FL3-5A3,
WCOR413, WCOR413-LIKE		 0.75 0.3 -0.29
17 AT5G11150 vesicle-associated membrane protein 713 vesicle-associated membrane
protein 713, VAMP713,
vesicle-associated membrane
protein 713		 0.75 0.33 -0.31
18 AT5G07860 HXXXD-type acyl-transferase family protein -0.74 0.31 -0.32
19 AT5G62930 SGNH hydrolase-type esterase superfamily protein -0.74 0.35 -0.31
20 AT4G24960 HVA22 homologue D ARABIDOPSIS THALIANA HVA22
HOMOLOGUE D, HVA22 homologue D		 0.74 0.31 -0.32
21 AT1G22400 UDP-Glycosyltransferase superfamily protein ARABIDOPSIS THALIANA UDP-GLUCOSYL
TRANSFERASE 85A1, UGT85A1		 -0.74 0.33 -0.33
22 AT4G36860 LIM domain-containing protein DA1-RELATED PROTEIN 1 -0.74 0.3 -0.33
23 AT1G75220 Major facilitator superfamily protein AtERDL6, ERD6-like 6 -0.73 0.31 -0.3
24 AT4G34650 squalene synthase 2 squalene synthase 2 0.73 0.32 -0.32
25 AT5G10830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.73 0.33 -0.33
26 AT5G52310 low-temperature-responsive protein 78 (LTI78) /
desiccation-responsive protein 29A (RD29A)		 COLD REGULATED 78, LTI140,
LOW-TEMPERATURE-INDUCED 78,
RESPONSIVE TO DESSICATION 29A		 0.72 0.32 -0.32
27 AT3G25140 Nucleotide-diphospho-sugar transferases superfamily protein GALACTURONOSYLTRANSFERASE 8,
QUASIMODO 1		 0.72 0.31 -0.32
28 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 0.72 0.32 -0.31
29 AT1G08970 nuclear factor Y, subunit C9 HEME ACTIVATED PROTEIN 5C, nuclear
factor Y, subunit C9		 0.71 0.31 -0.3
30 AT4G18390 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
2		 TCP2, TEOSINTE BRANCHED 1,
cycloidea and PCF transcription
factor 2		 0.71 0.31 -0.3
31 AT1G75270 dehydroascorbate reductase 2 dehydroascorbate reductase 2 -0.71 0.3 -0.3
32 AT1G08840 DNA replication helicase, putative embryo defective 2411 0.7 0.33 -0.3
33 AT2G33860 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE TRANSCRIPTION
FACTOR 3, ETTIN		 0.7 0.31 -0.3
34 AT3G13690 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.7 0.32 -0.33
35 AT1G01250 Integrase-type DNA-binding superfamily protein 0.7 0.31 -0.31
36 AT1G12580 phosphoenolpyruvate carboxylase-related kinase 1 phosphoenolpyruvate
carboxylase-related kinase 1		 0.7 0.31 -0.31
37 AT3G24190 Protein kinase superfamily protein 0.7 0.34 -0.33
38 AT1G27950 glycosylphosphatidylinositol-anchored lipid protein
transfer 1		 glycosylphosphatidylinositol-ancho
red lipid protein transfer 1		 0.7 0.32 -0.34
39 AT4G30500 Protein of unknown function (DUF788) -0.7 0.31 -0.31
40 AT2G22080 unknown protein; Has 96314 Blast hits to 34847 proteins in
1702 species: Archae - 612; Bacteria - 27969; Metazoa -
24311; Fungi - 12153; Plants - 4409; Viruses - 1572; Other
Eukaryotes - 25288 (source: NCBI BLink).		 0.7 0.33 -0.32
41 AT3G17130 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.69 0.32 -0.34
42 AT3G25870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits
to 50 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.31 -0.33
43 AT1G21790 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.69 0.31 -0.31
44 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 -0.69 0.33 -0.31
45 AT2G05400 Ubiquitin-specific protease family C19-related protein 0.69 0.32 -0.32
46 AT2G35620 Leucine-rich repeat protein kinase family protein FEI 2 0.69 0.3 -0.31
47 AT4G15130 phosphorylcholine cytidylyltransferase2 ATCCT2, phosphorylcholine
cytidylyltransferase2		 0.69 0.31 -0.29
48 AT2G28720 Histone superfamily protein 0.69 0.32 -0.33
49 AT4G35730 Regulator of Vps4 activity in the MVB pathway protein 0.68 0.34 -0.31
50 AT2G18890 Protein kinase superfamily protein 0.68 0.31 -0.32
51 AT3G05660 receptor like protein 33 receptor like protein 33, receptor
like protein 33		 0.68 0.28 -0.31
52 AT3G04350 Plant protein of unknown function (DUF946) -0.68 0.31 -0.31
53 AT2G04940 scramblase-related -0.68 0.34 -0.32
54 AT2G47960 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF974 (InterPro:IPR010378); Has 285 Blast
hits to 284 proteins in 126 species: Archae - 0; Bacteria -
0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0;
Other Eukaryotes - 35 (source: NCBI BLink).		 -0.67 0.31 -0.29
55 AT4G37470 alpha/beta-Hydrolases superfamily protein 0.67 0.29 -0.33
56 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.67 0.32 -0.34
57 AT2G37750 unknown protein; Has 21 Blast hits to 21 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.34
58 AT2G29210 splicing factor PWI domain-containing protein 0.67 0.31 -0.34
59 AT4G33560 Wound-responsive family protein -0.66 0.32 -0.31
60 AT1G54410 dehydrin family protein 0.66 0.33 -0.31
61 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.29 -0.31
62 AT5G39890 Protein of unknown function (DUF1637) -0.66 0.32 -0.35
63 AT1G48200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.66 0.33 -0.32
64 AT5G59560 sensitivity to red light reduced protein (SRR1) SENSITIVITY TO RED LIGHT REDUCED 1 -0.66 0.32 -0.31
65 AT2G02080 indeterminate(ID)-domain 4 indeterminate(ID)-domain 4,
indeterminate(ID)-domain 4		 0.65 0.32 -0.32
66 AT4G16650 O-fucosyltransferase family protein 0.65 0.33 -0.33
67 AT5G19120 Eukaryotic aspartyl protease family protein -0.65 0.32 -0.33
68 AT1G10760 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GWD, GWD1, STARCH EXCESS 1, SOP,
SOP1		 0.65 0.28 -0.33
69 AT3G15770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits
to 143 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.65 0.3 -0.33
70 AT3G10040 sequence-specific DNA binding transcription factors -0.65 0.31 -0.33
71 AT2G21320 B-box zinc finger family protein 0.65 0.3 -0.31
72 AT5G46070 Guanylate-binding family protein 0.65 0.31 -0.32
73 AT5G04330 Cytochrome P450 superfamily protein -0.65 0.34 -0.29
74 AT5G07870 HXXXD-type acyl-transferase family protein -0.64 0.32 -0.31
75 AT3G14890 phosphoesterase 0.64 0.3 -0.31
76 AT1G22380 UDP-glucosyl transferase 85A3 UDP-glucosyl transferase 85A3,
UDP-glucosyl transferase 85A3		 -0.64 0.31 -0.35
77 AT2G24550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits
to 219 proteins in 33 species: Archae - 0; Bacteria - 0;
Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.64 0.31 -0.32
78 AT4G27450 Aluminium induced protein with YGL and LRDR motifs -0.64 0.32 -0.32
79 AT5G51170 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0406
(InterPro:IPR019146); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.64 0.31 -0.32
80 AT2G46830 circadian clock associated 1 AtCCA1, circadian clock associated
1		 0.64 0.32 -0.31
81 AT3G60490 Integrase-type DNA-binding superfamily protein -0.64 0.32 -0.33
82 AT3G47500 cycling DOF factor 3 cycling DOF factor 3 0.64 0.34 -0.32
83 AT5G56020 Got1/Sft2-like vescicle transport protein family -0.64 0.32 -0.31
84 AT4G39170 Sec14p-like phosphatidylinositol transfer family protein 0.64 0.32 -0.31
85 AT4G28320 Glycosyl hydrolase superfamily protein AtMAN5, endo-beta-mannase 5 0.64 0.3 -0.32
86 AT2G29020 Rab5-interacting family protein -0.64 0.32 -0.31
87 AT1G77660 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.63 0.35 -0.31
88 AT4G10270 Wound-responsive family protein -0.63 0.3 -0.32
89 AT1G68440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits
to 86 proteins in 29 species: Archae - 0; Bacteria - 6;
Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink).		 -0.63 0.34 -0.32
90 AT1G55090 carbon-nitrogen hydrolase family protein -0.63 0.31 -0.31
91 AT5G08240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits
to 69 proteins in 10 species: Archae - 0; Bacteria - 1;
Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.3 -0.3
92 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE -0.63 0.28 -0.3
93 AT1G27030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G27020.1); Has 504 Blast hits
to 502 proteins in 169 species: Archae - 0; Bacteria - 299;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 138 (source: NCBI BLink).		 -0.62 0.32 -0.33
94 AT1G33055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.32 -0.3
95 AT5G52050 MATE efflux family protein -0.62 0.32 -0.34
96 AT2G31090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.32 -0.32
97 AT1G01490 Heavy metal transport/detoxification superfamily protein -0.62 0.31 -0.31
98 AT5G15120 Protein of unknown function (DUF1637) -0.61 0.3 -0.31
99 AT1G26300 BSD domain-containing protein -0.61 0.33 -0.32
100 AT2G42760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881); Has 170
Blast hits to 164 proteins in 34 species: Archae - 0;
Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107;
Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).		 -0.61 0.32 -0.32
101 AT2G01300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15010.1); Has 73 Blast hits
to 73 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.32 -0.31
102 AT5G11850 Protein kinase superfamily protein -0.6 0.29 -0.3
103 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.6 0.32 -0.31
104 AT2G16980 Major facilitator superfamily protein -0.6 0.32 -0.3
105 AT3G27220 Galactose oxidase/kelch repeat superfamily protein -0.6 0.3 -0.32
106 AT1G32460 unknown protein; Has 19 Blast hits to 19 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.31