AT5G04540 : -
Query Information
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AGICode AT5G04540
Description Myotubularin-like phosphatases II superfamily
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G04540 Myotubularin-like phosphatases II superfamily 1 0.29 -0.32
2 AT5G48410 glutamate receptor 1.3 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 1.3, glutamate receptor
1.3		 0.85 0.31 -0.31
3 AT5G22940 FRA8 homolog FRA8 homolog -0.84 0.3 -0.32
4 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 0.84 0.31 -0.32
5 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 -0.83 0.29 -0.32
6 AT5G48900 Pectin lyase-like superfamily protein -0.81 0.33 -0.31
7 AT5G11420 Protein of unknown function, DUF642 -0.81 0.32 -0.32
8 AT5G43100 Eukaryotic aspartyl protease family protein 0.81 0.31 -0.33
9 AT3G05970 long-chain acyl-CoA synthetase 6 ATLACS6, long-chain acyl-CoA
synthetase 6		 0.81 0.31 -0.3
10 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.81 0.31 -0.3
11 AT1G17700 prenylated RAB acceptor 1.F1 prenylated RAB acceptor 1.F1 -0.81 0.31 -0.32
12 AT4G00400 glycerol-3-phosphate acyltransferase 8 AtGPAT8, glycerol-3-phosphate
acyltransferase 8		 -0.8 0.31 -0.31
13 AT4G38840 SAUR-like auxin-responsive protein family -0.8 0.29 -0.32
14 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain -0.79 0.34 -0.31
15 AT4G31840 early nodulin-like protein 15 AtENODL15, early nodulin-like
protein 15		 -0.79 0.32 -0.31
16 AT3G52200 Dihydrolipoamide acetyltransferase, long form protein LTA3 0.79 0.32 -0.3
17 AT3G16370 GDSL-like Lipase/Acylhydrolase superfamily protein -0.78 0.31 -0.27
18 AT3G26690 nudix hydrolase homolog 13 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 13, nudix
hydrolase homolog 13, nudix
hydrolase homolog 13		 0.78 0.33 -0.31
19 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 0.78 0.31 -0.33
20 AT4G38860 SAUR-like auxin-responsive protein family -0.78 0.32 -0.29
21 AT5G09440 EXORDIUM like 4 EXORDIUM like 4 0.78 0.32 -0.31
22 AT1G18840 IQ-domain 30 IQ-domain 30 -0.78 0.33 -0.28
23 AT5G45670 GDSL-like Lipase/Acylhydrolase superfamily protein -0.78 0.33 -0.3
24 AT5G58960 Plant protein of unknown function (DUF641) GRAVITROPIC IN THE LIGHT -0.77 0.32 -0.34
25 AT2G25060 early nodulin-like protein 14 AtENODL14, early nodulin-like
protein 14		 -0.77 0.31 -0.31
26 AT5G02890 HXXXD-type acyl-transferase family protein -0.77 0.31 -0.32
27 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein 0.77 0.32 -0.32
28 AT4G08180 OSBP(oxysterol binding protein)-related protein 1C OSBP(oxysterol binding
protein)-related protein 1C		 0.77 0.31 -0.3
29 AT1G62300 WRKY family transcription factor ATWRKY6, WRKY6 0.77 0.32 -0.33
30 AT3G23805 ralf-like 24 ralf-like 24 -0.77 0.31 -0.31
31 AT5G14680 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.77 0.33 -0.31
32 AT5G38300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 12 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G67035.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.77 0.32 -0.31
33 AT2G29065 GRAS family transcription factor 0.77 0.33 -0.3
34 AT4G29380 protein kinase family protein / WD-40 repeat family protein Arabidopsis thaliana vacuolar
protein sorting 15, vacuolar
protein sorting 15		 0.76 0.32 -0.3
35 AT4G22560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G12450.1); Has 380 Blast hits
to 380 proteins in 21 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 6; Plants - 374; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.32 -0.32
36 AT5G15160 BANQUO 2 BASIC HELIX-LOOP-HELIX PROTEIN
134, BANQUO 2		 -0.76 0.32 -0.29
37 AT1G29500 SAUR-like auxin-responsive protein family -0.76 0.3 -0.3
38 AT3G29090 pectin methylesterase 31 A. THALIANA PECTIN METHYLESTERASE
31, pectin methylesterase 31		 0.76 0.32 -0.34
39 AT1G04820 tubulin alpha-4 chain TORTIFOLIA 2, tubulin alpha-4
chain		 -0.76 0.3 -0.33
40 AT4G15610 Uncharacterised protein family (UPF0497) 0.76 0.32 -0.3
41 AT5G55070 Dihydrolipoamide succinyltransferase 0.76 0.31 -0.33
42 AT3G49210 O-acyltransferase (WSD1-like) family protein 0.76 0.32 -0.33
43 AT5G44680 DNA glycosylase superfamily protein -0.76 0.32 -0.33
44 AT5G10400 Histone superfamily protein -0.76 0.31 -0.31
45 AT5G06270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G11600.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.75 0.33 -0.3
46 AT1G50010 tubulin alpha-2 chain tubulin alpha-2 chain -0.75 0.32 -0.29
47 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule 0.75 0.32 -0.31
48 AT2G46710 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.75 0.31 -0.32
49 AT3G57040 response regulator 9 response regulator 9, RESPONSE
REGULATOR 4		 -0.75 0.3 -0.33
50 AT1G05680 Uridine diphosphate glycosyltransferase 74E2 Uridine diphosphate
glycosyltransferase 74E2		 0.75 0.32 -0.33
51 AT5G42870 phosphatidic acid phosphohydrolase 2 PHOSPHATIDIC ACID PHOSPHOHYDROLASE
2, phosphatidic acid
phosphohydrolase 2		 0.75 0.32 -0.31
52 AT2G25740 ATP-dependent protease La (LON) domain protein 0.75 0.31 -0.32
53 AT1G70830 MLP-like protein 28 MLP-like protein 28 -0.75 0.31 -0.31
54 AT4G28050 tetraspanin7 tetraspanin7 -0.74 0.29 -0.33
55 AT1G01620 plasma membrane intrinsic protein 1C PLASMA MEMBRANE INTRINSIC PROTEIN
1;3, plasma membrane intrinsic
protein 1C, TMP-B		 -0.74 0.32 -0.34
56 AT4G14750 IQ-domain 19 IQ-domain 19 -0.74 0.3 -0.33
57 AT3G03220 expansin A13 EXPANSIN 13, expansin A13, ATHEXP
ALPHA 1.22, EXP13, expansin A13		 -0.74 0.33 -0.32
58 AT3G26090 G-protein coupled receptors;GTPase activators REGULATOR OF G-PROTEIN SIGNALING
1, REGULATOR OF G-PROTEIN
SIGNALING 1		 0.74 0.32 -0.31
59 AT1G29510 SAUR-like auxin-responsive protein family SMALL AUXIN UPREGULATED 68 -0.74 0.31 -0.31
60 AT4G18970 GDSL-like Lipase/Acylhydrolase superfamily protein -0.74 0.3 -0.3
61 AT5G22390 Protein of unknown function (DUF3049) -0.74 0.31 -0.32
62 AT3G23790 AMP-dependent synthetase and ligase family protein acyl activating enzyme 16 0.74 0.32 -0.31
63 AT1G69480 EXS (ERD1/XPR1/SYG1) family protein 0.73 0.31 -0.3
64 AT5G15050 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.73 0.31 -0.35
65 AT2G16950 transportin 1 TRANSPORTIN 1, transportin 1 0.73 0.32 -0.31
66 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 0.73 0.32 -0.33
67 AT3G02640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits
to 96 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.73 0.32 -0.32
68 AT1G18490 Protein of unknown function (DUF1637) -0.73 0.3 -0.32
69 AT3G08030 Protein of unknown function, DUF642 -0.73 0.31 -0.33
70 AT1G10780 F-box/RNI-like superfamily protein -0.73 0.31 -0.33
71 AT1G31335 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 34 Blast hits to 34 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.73 0.3 -0.33
72 AT4G12980 Auxin-responsive family protein -0.73 0.32 -0.29
73 AT2G13650 golgi nucleotide sugar transporter 1 golgi nucleotide sugar transporter
1		 0.73 0.29 -0.31
74 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.73 0.33 -0.31
75 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 0.73 0.32 -0.31
76 AT1G27980 dihydrosphingosine phosphate lyase ATDPL1, dihydrosphingosine
phosphate lyase		 0.72 0.31 -0.32
77 AT3G48860 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins
in 897 species: Archae - 180; Bacteria - 1190; Metazoa -
6552; Fungi - 1361; Plants - 886; Viruses - 50; Other
Eukaryotes - 2210 (source: NCBI BLink).		 0.72 0.31 -0.31
78 AT1G55260 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.72 0.34 -0.32
79 AT5G16870 Peptidyl-tRNA hydrolase II (PTH2) family protein -0.72 0.3 -0.31
80 AT5G07590 Transducin/WD40 repeat-like superfamily protein -0.72 0.32 -0.3
81 AT1G59930 MADS-box family protein -0.72 0.29 -0.32
82 AT4G04960 Concanavalin A-like lectin protein kinase family protein 0.72 0.32 -0.31
83 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.72 0.31 -0.33
84 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 0.72 0.3 -0.3
85 AT4G30330 Small nuclear ribonucleoprotein family protein -0.72 0.32 -0.33
86 AT2G38250 Homeodomain-like superfamily protein 0.72 0.3 -0.34
87 AT1G18160 Protein kinase superfamily protein 0.72 0.3 -0.32
88 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 0.72 0.31 -0.33
89 AT3G15680 Ran BP2/NZF zinc finger-like superfamily protein -0.72 0.33 -0.3
90 AT2G34920 RING/U-box superfamily protein embryo sac development arrest 18 -0.72 0.3 -0.33
91 AT1G29460 SAUR-like auxin-responsive protein family -0.72 0.32 -0.31
92 AT4G04620 Ubiquitin-like superfamily protein autophagy 8b 0.71 0.34 -0.31
93 AT3G62630 Protein of unknown function (DUF1645) -0.71 0.3 -0.31
94 AT1G69310 WRKY DNA-binding protein 57 ATWRKY57, WRKY DNA-binding protein
57		 0.71 0.3 -0.32
95 AT2G43000 NAC domain containing protein 42 NAC domain containing protein 42,
NAC domain containing protein 42		 0.71 0.32 -0.32
96 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 -0.71 0.33 -0.3
97 AT3G42725 Putative membrane lipoprotein -0.71 0.3 -0.32
98 AT1G79710 Major facilitator superfamily protein 0.71 0.32 -0.33
99 AT4G13250 NAD(P)-binding Rossmann-fold superfamily protein NON-YELLOW COLORING 1 0.71 0.3 -0.31
100 AT5G03905 Iron-sulphur cluster biosynthesis family protein 0.71 0.31 -0.32
101 AT5G50740 Heavy metal transport/detoxification superfamily protein -0.71 0.29 -0.28
102 AT3G12610 Leucine-rich repeat (LRR) family protein DNA-DAMAGE REPAIR/TOLERATION 100 -0.71 0.31 -0.32
103 AT1G30620 NAD(P)-binding Rossmann-fold superfamily protein HIGH SUGAR RESPONSE8, MURUS 4,
UDP-D-XYLOSE 4-EPIMERASE 1		 0.71 0.33 -0.3
104 AT2G27150 abscisic aldehyde oxidase 3 abscisic aldehyde oxidase 3,
Aldehyde oxidase delta,
Arabidopsis thaliana aldehyde
oxidase 3, AtAAO3		 0.71 0.32 -0.31
105 AT5G17760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.34 -0.3
106 AT3G10320 Glycosyltransferase family 61 protein 0.71 0.32 -0.32
107 AT5G18060 SAUR-like auxin-responsive protein family -0.71 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis -0.8 0.43 -0.46 C0007
109 C0170 MST_2128.3 - - - -0.77 0.51 -0.47
110 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.75 0.46 -0.48 C0227
111 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.73 0.43 -0.44 C0252