AT5G04560 : DEMETER
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G04560
Description HhH-GPD base excision DNA repair family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 1 0.32 -0.32
2 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.77 0.31 -0.33
3 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 0.77 0.34 -0.31
4 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.72 0.31 -0.34
5 AT5G58410 HEAT/U-box domain-containing protein 0.69 0.31 -0.31
6 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.67 0.31 -0.32
7 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.65 0.33 -0.31
8 AT5G11040 TRS120 AtTRS120, TRS120 0.65 0.29 -0.31
9 AT5G04460 RING/U-box superfamily protein 0.65 0.32 -0.32
10 AT4G24410 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.33 -0.33
11 AT1G79830 golgin candidate 5 golgin candidate 5 0.64 0.34 -0.31
12 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.64 0.31 -0.31
13 AT5G64160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.33 -0.32
14 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.63 0.29 -0.3
15 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.33 -0.31
16 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 0.63 0.31 -0.33
17 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.31 -0.32
18 AT2G23940 Protein of unknown function (DUF788) -0.62 0.29 -0.31
19 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 0.62 0.32 -0.32
20 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.62 0.31 -0.32
21 AT4G14920 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.62 0.3 -0.32
22 AT5G27970 ARM repeat superfamily protein 0.62 0.31 -0.32
23 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 0.61 0.31 -0.3
24 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.61 0.31 -0.33
25 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.61 0.31 -0.34
26 AT1G01960 SEC7-like guanine nucleotide exchange family protein embryo sac development arrest 10 0.61 0.34 -0.31
27 AT1G67720 Leucine-rich repeat protein kinase family protein 0.61 0.33 -0.31
28 AT2G46060 transmembrane protein-related 0.61 0.3 -0.3
29 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.61 0.31 -0.31
30 AT5G43310 COP1-interacting protein-related 0.61 0.35 -0.33
31 AT2G25230 myb domain protein 100 myb domain protein 100, myb domain
protein 100		 -0.6 0.33 -0.32
32 AT2G31970 DNA repair-recombination protein (RAD50) ATRAD50, RAD50 0.6 0.33 -0.31
33 AT3G12100 Cation efflux family protein 0.6 0.31 -0.3
34 AT4G23910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10970.4); Has 52 Blast hits
to 52 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.31
35 AT5G35710 transposable element gene -0.59 0.32 -0.3
36 AT1G49880 Erv1/Alr family protein AtErv1, EMBRYO DEFECTIVE 3106,
Erv1		 -0.59 0.33 -0.31
37 AT3G09520 exocyst subunit exo70 family protein H4 exocyst subunit exo70 family
protein H4, exocyst subunit exo70
family protein H4		 -0.58 0.29 -0.32
38 AT4G00720 shaggy-like protein kinase 32 SHAGGY-LIKE PROTEIN KINASE THETA,
shaggy-like protein kinase 32,
shaggy-like protein kinase 32		 0.58 0.32 -0.32
39 AT4G16450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: photorespiration; LOCATED IN: mitochondrion,
mitochondrial membrane, mitochondrial respiratory chain
complex I, respiratory chain complex I, membrane; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.32 -0.31
40 AT2G30730 Protein kinase superfamily protein -0.58 0.31 -0.31
41 AT3G08500 myb domain protein 83 myb domain protein 83, myb domain
protein 83		 -0.58 0.32 -0.32
42 AT4G12020 protein kinase family protein ATWRKY19, MITOGEN-ACTIVATED
PROTEIN KINASE KINASE KINASE 11,
MAPK/ERK KINASE KINASE 4, WRKY19		 0.58 0.32 -0.32
43 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.58 0.31 -0.32
44 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.58 0.29 -0.31
45 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.58 0.32 -0.31
46 AT5G19240 Glycoprotein membrane precursor GPI-anchored -0.58 0.34 -0.32
47 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 -0.58 0.33 -0.3
48 AT5G39340 histidine-containing phosphotransmitter 3 histidine-containing
phosphotransmitter 3, ARABIDOPSIS
THALIANA HISTIDINE-CONTAINING
PHOSPHOTRANSMITTER 2		 -0.57 0.31 -0.32
49 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 0.57 0.3 -0.3
50 AT3G06020 Protein of unknown function (DUF3049) FANTASTIC FOUR 4 -0.57 0.3 -0.31
51 AT4G31000 Calmodulin-binding protein 0.57 0.29 -0.34
52 AT1G50470 F-box associated ubiquitination effector family protein 0.56 0.31 -0.3
53 AT1G68270 AMP-dependent synthetase and ligase family protein 0.56 0.32 -0.3
54 AT2G24600 Ankyrin repeat family protein -0.56 0.33 -0.31
55 AT4G17980 NAC domain containing protein 71 NAC domain containing protein 71,
NAC domain containing protein 71		 -0.56 0.31 -0.3
56 AT4G21323 Subtilase family protein 0.56 0.3 -0.32
57 AT5G12230 MED19A; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G19480.2); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 MED19A -0.56 0.31 -0.33
58 AT4G10925 Nuclear transport factor 2 (NTF2) family protein -0.56 0.29 -0.32
59 AT5G06510 nuclear factor Y, subunit A10 nuclear factor Y, subunit A10 0.56 0.32 -0.31
60 AT1G34190 NAC domain containing protein 17 NAC domain containing protein 17,
NAC domain containing protein 17		 -0.55 0.31 -0.31
61 AT1G74480 RWP-RK domain-containing protein AtRKD2, RWP-RK domain containing 2 -0.55 0.31 -0.32
62 AT4G33900 Galactose oxidase/kelch repeat superfamily protein -0.55 0.31 -0.29
63 AT5G60100 pseudo-response regulator 3 pseudo-response regulator 3,
pseudo-response regulator 3		 0.55 0.32 -0.32
64 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.55 0.32 -0.34
65 AT2G42590 general regulatory factor 9 GF14 MU, general regulatory factor
9		 -0.55 0.34 -0.29
66 AT1G17390 transposable element gene -0.55 0.32 -0.31
67 AT3G43920 dicer-like 3 DICER-LIKE 3, dicer-like 3 0.55 0.31 -0.3
68 AT5G39500 GNOM-like 1 ENDOPLASMIC RETICULUM MORPHOLOGY
1, GNOM-like 1		 0.55 0.31 -0.31
69 AT3G25800 protein phosphatase 2A subunit A2 PDF1, protein phosphatase 2A
subunit A2, PR 65		 -0.55 0.32 -0.32
70 AT4G09540 transposable element gene -0.55 0.3 -0.31
71 AT2G04675 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.29 -0.3
72 AT4G35987 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.54 0.3 -0.3
73 AT5G64280 dicarboxylate transporter 2.2 dicarboxylate transporter 2.2 0.54 0.32 -0.32
74 AT1G27100 Actin cross-linking protein -0.54 0.31 -0.29
75 AT5G47090 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2052, coiled-coil (InterPro:IPR018613);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.54 0.3 -0.31
76 AT4G30440 UDP-D-glucuronate 4-epimerase 1 UDP-D-glucuronate 4-epimerase 1 -0.54 0.31 -0.32
77 AT5G47490 RGPR-related 0.54 0.31 -0.32
78 AT3G20030 F-box and associated interaction domains-containing protein -0.54 0.28 -0.31
79 AT5G59640 transposable element gene 0.54 0.32 -0.32
80 AT4G23070 RHOMBOID-like protein 7 RHOMBOID-like protein 7,
RHOMBOID-like protein 7		 -0.53 0.33 -0.31
81 AT5G62500 end binding protein 1B ATEB1, END BINDING PROTEIN 1B, end
binding protein 1B		 -0.53 0.3 -0.33
82 AT4G25470 C-repeat/DRE binding factor 2 ATCBF2, C-repeat/DRE binding
factor 2, DRE/CRT-BINDING PROTEIN
1C, FREEZING TOLERANCE QTL 4		 -0.53 0.32 -0.32
83 AT5G18250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G04040.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.53 0.28 -0.33
84 AT5G63510 gamma carbonic anhydrase like 1 gamma carbonic anhydrase like 1 -0.53 0.3 -0.31
85 AT4G32010 HSI2-like 1 HSI2-L1, HSI2-like 1,
VP1/ABI3-LIKE 2		 0.53 0.31 -0.31
86 AT3G60410 Protein of unknown function (DUF1639) -0.53 0.33 -0.31
87 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 -0.53 0.33 -0.32
88 AT1G31080 F-box family protein -0.53 0.31 -0.31
89 AT4G04590 transposable element gene 0.52 0.3 -0.3
90 AT3G57370 Cyclin family protein -0.52 0.3 -0.29
91 AT5G17350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 8 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.52 0.33 -0.31
92 AT3G58630 sequence-specific DNA binding transcription factors -0.52 0.32 -0.31
93 ATMG00140 hypothetical protein ORF167 -0.52 0.32 -0.31
94 AT1G62130 AAA-type ATPase family protein 0.52 0.33 -0.31
95 AT4G27930 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.33 -0.31
96 AT4G24570 dicarboxylate carrier 2 dicarboxylate carrier 2 -0.52 0.31 -0.33
97 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 0.52 0.3 -0.31
98 AT1G29520 AWPM-19-like family protein -0.51 0.32 -0.32
99 AT2G41370 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE2 -0.51 0.33 -0.33
100 AT1G27410 DNA repair metallo-beta-lactamase family protein 0.51 0.32 -0.29
101 AT1G47830 SNARE-like superfamily protein -0.51 0.29 -0.31
102 AT4G29620 Cytidine/deoxycytidylate deaminase family protein 0.51 0.31 -0.31
103 AT5G61600 ethylene response factor 104 ethylene response factor 104 -0.51 0.32 -0.31
104 AT5G07570 glycine/proline-rich protein -0.51 0.28 -0.31
105 AT1G18740 Protein of unknown function (DUF793) -0.51 0.33 -0.31
106 AT5G60320 Concanavalin A-like lectin protein kinase family protein -0.5 0.33 -0.31
107 AT4G12720 MutT/nudix family protein Arabidopsis thaliana Nudix
hydrolase homolog 7, GROWTH FACTOR
GENE 1, NUDT7		 -0.5 0.34 -0.32
108 AT2G46130 WRKY DNA-binding protein 43 WRKY DNA-BINDING PROTEIN 43, WRKY
DNA-binding protein 43		 -0.5 0.32 -0.31
109 AT1G76700 DNAJ heat shock N-terminal domain-containing protein -0.5 0.33 -0.31
110 AT4G39370 ubiquitin-specific protease 27 ubiquitin-specific protease 27 -0.5 0.34 -0.32
111 AT5G54850 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.5 0.3 -0.3
112 AT5G03510 C2H2-type zinc finger family protein -0.5 0.32 -0.33
113 AT3G10460 Plant self-incompatibility protein S1 family -0.5 0.3 -0.36
114 AT2G14170 aldehyde dehydrogenase 6B2 aldehyde dehydrogenase 6B2 -0.5 0.31 -0.34
115 AT5G51190 Integrase-type DNA-binding superfamily protein -0.5 0.32 -0.32
116 AT1G11755 Undecaprenyl pyrophosphate synthetase family protein LEAF WILTING 1 -0.5 0.3 -0.33