AT5G04050 : -
Query Information
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AGICode AT5G04050
Description RNA-directed DNA polymerase (reverse transcriptase)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 1 0.31 -0.3
2 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.7 0.34 -0.31
3 AT2G43270 F-box and associated interaction domains-containing protein -0.7 0.31 -0.29
4 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.68 0.32 -0.32
5 AT5G24740 Protein of unknown function (DUF1162) 0.68 0.31 -0.32
6 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.31 -0.32
7 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.67 0.29 -0.32
8 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.66 0.33 -0.32
9 AT2G28240 ATP-dependent helicase family protein 0.66 0.29 -0.32
10 AT5G60260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.33 -0.31
11 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.29
12 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.64 0.32 -0.3
13 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 0.64 0.32 -0.33
14 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.64 0.31 -0.32
15 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.64 0.32 -0.32
16 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 -0.64 0.33 -0.33
17 AT5G46200 Protein of Unknown Function (DUF239) -0.63 0.31 -0.33
18 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.31 -0.31
19 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.63 0.33 -0.33
20 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.63 0.3 -0.3
21 AT3G24790 Protein kinase superfamily protein 0.63 0.31 -0.34
22 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 0.62 0.32 -0.29
23 AT3G61390 RING/U-box superfamily protein 0.62 0.3 -0.32
24 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.62 0.32 -0.32
25 AT5G53670 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.62 0.31 -0.31
26 AT1G50470 F-box associated ubiquitination effector family protein 0.61 0.31 -0.33
27 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.61 0.29 -0.3
28 AT2G01130 DEA(D/H)-box RNA helicase family protein 0.61 0.32 -0.31
29 AT3G63180 TIC-like TICKLE, TIC-like 0.61 0.32 -0.32
30 AT1G23320 tryptophan aminotransferase related 1 tryptophan aminotransferase
related 1		 -0.61 0.32 -0.32
31 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein -0.61 0.32 -0.31
32 AT5G64390 RNA-binding KH domain-containing protein HUA ENHANCER 4 0.6 0.32 -0.31
33 AT2G13630 F-box associated ubiquitination effector family protein 0.6 0.32 -0.31
34 AT2G17210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.6 0.32 -0.31
35 AT3G62640 Protein of unknown function (DUF3511) 0.6 0.33 -0.28
36 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.6 0.34 -0.31
37 AT2G07650 transposable element gene 0.6 0.3 -0.32
38 AT3G12100 Cation efflux family protein 0.6 0.31 -0.31
39 AT5G59640 transposable element gene 0.6 0.33 -0.31
40 AT4G13960 F-box/RNI-like superfamily protein -0.59 0.31 -0.34
41 AT2G34980 phosphatidylinositolglycan synthase family protein SETH1 0.59 0.3 -0.32
42 AT5G23150 Tudor/PWWP/MBT domain-containing protein ENHANCER OF AG-4 2 0.59 0.34 -0.31
43 AT1G20180 Protein of unknown function (DUF677) 0.59 0.31 -0.32
44 AT4G18410 transposable element gene 0.59 0.29 -0.31
45 AT4G38120 ARM repeat superfamily protein 0.59 0.33 -0.3
46 AT4G22650 CONTAINS InterPro DOMAIN/s: Plant lipid transfer
protein/seed storage/trypsin-alpha amylase inhibitor
(InterPro:IPR003612); BEST Arabidopsis thaliana protein
match is: Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin superfamily protein
(TAIR:AT4G22640.1); Has 25 Blast hits to 25 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.32 -0.3
47 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.58 0.3 -0.28
48 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.31 -0.33
49 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO 0.58 0.29 -0.32
50 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.29 -0.3
51 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.57 0.32 -0.31
52 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.57 0.31 -0.31
53 AT2G05980 transposable element gene 0.57 0.3 -0.31
54 AT1G05400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06810.1); Has 31 Blast hits
to 31 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.31 -0.31
55 AT5G43310 COP1-interacting protein-related 0.57 0.32 -0.34
56 AT3G11500 Small nuclear ribonucleoprotein family protein -0.56 0.3 -0.32
57 AT3G11040 Glycosyl hydrolase family 85 AtENGase85B,
Endo-beta-N-acetyglucosaminidase
85B		 0.56 0.3 -0.31
58 AT4G03950 Nucleotide/sugar transporter family protein 0.56 0.33 -0.32
59 AT1G75790 SKU5 similar 18 SKU5 similar 18 0.56 0.31 -0.32
60 AT5G56510 pumilio 12 pumilio 12, pumilio 12 -0.56 0.34 -0.3
61 AT5G25270 Ubiquitin-like superfamily protein 0.56 0.31 -0.32
62 AT1G75470 purine permease 15 purine permease 15, purine
permease 15		 0.56 0.34 -0.3
63 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.55 0.3 -0.32
64 AT3G20950 cytochrome P450, family 705, subfamily A, polypeptide 32 cytochrome P450, family 705,
subfamily A, polypeptide 32		 -0.55 0.3 -0.31
65 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 -0.55 0.3 -0.33
66 AT1G29080 Papain family cysteine protease 0.55 0.31 -0.33
67 AT5G52975 Protein of unknown function (DUF1278) 0.55 0.31 -0.31
68 AT1G35780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits
to 144 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.29 -0.3
69 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.55 0.32 -0.3
70 AT1G74630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.55 0.3 -0.32
71 AT3G45880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.54 0.33 -0.31
72 AT1G33540 serine carboxypeptidase-like 18 serine carboxypeptidase-like 18 -0.54 0.32 -0.31
73 AT3G63470 serine carboxypeptidase-like 40 serine carboxypeptidase-like 40 -0.54 0.32 -0.31
74 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.53 0.31 -0.33
75 AT4G26620 Sucrase/ferredoxin-like family protein -0.53 0.34 -0.31
76 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.52 0.3 -0.33
77 AT5G06650 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS 2 -0.52 0.32 -0.32
78 AT5G27810 MADS-box transcription factor family protein -0.52 0.31 -0.31
79 AT5G39340 histidine-containing phosphotransmitter 3 histidine-containing
phosphotransmitter 3, ARABIDOPSIS
THALIANA HISTIDINE-CONTAINING
PHOSPHOTRANSMITTER 2		 -0.51 0.33 -0.31
80 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 -0.51 0.28 -0.32
81 AT2G04063 glycine-rich protein -0.51 0.3 -0.32
82 AT2G18970 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.31 -0.3
83 AT4G15860 transposable element gene -0.5 0.31 -0.32
84 AT3G15250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits
to 218 proteins in 63 species: Archae - 0; Bacteria - 22;
Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other
Eukaryotes - 93 (source: NCBI BLink).		 -0.5 0.31 -0.3
85 AT3G29600 transposable element gene -0.5 0.32 -0.32
86 AT1G35663 transposable element gene -0.5 0.31 -0.31
87 AT2G42590 general regulatory factor 9 GF14 MU, general regulatory factor
9		 -0.5 0.32 -0.31