AT5G04440 : -
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AGICode AT5G04440
Description Protein of unknown function (DUF1997)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G04440 Protein of unknown function (DUF1997) 1 0.31 -0.33
2 AT3G05350 Metallopeptidase M24 family protein 0.87 0.3 -0.32
3 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein
0.85 0.31 -0.32
4 AT5G05200 Protein kinase superfamily protein 0.85 0.32 -0.31
5 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
0.83 0.34 -0.32
6 AT5G03880 Thioredoxin family protein 0.82 0.29 -0.31
7 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1
0.81 0.34 -0.31
8 AT1G68830 STT7 homolog STN7 STT7 homolog STN7 0.81 0.31 -0.3
9 AT5G19540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).
0.8 0.33 -0.32
10 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.79 0.32 -0.31
11 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 0.78 0.33 -0.31
12 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein 0.78 0.3 -0.31
13 AT4G03520 Thioredoxin superfamily protein ATHM2 0.78 0.33 -0.33
14 AT3G15900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
0.78 0.31 -0.32
15 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.78 0.31 -0.32
16 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10
0.77 0.31 -0.34
17 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4
0.77 0.32 -0.34
18 AT4G14210 phytoene desaturase 3 PIGMENT DEFECTIVE 226, PHYTOENE
DESATURASE, phytoene desaturase 3
0.77 0.31 -0.3
19 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG
0.77 0.32 -0.31
20 AT5G04900 NYC1-like NYC1-like 0.77 0.29 -0.32
21 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3
0.77 0.32 -0.31
22 AT1G04620 coenzyme F420 hydrogenase family / dehydrogenase, beta
subunit family
7-hydroxymethyl chlorophyll a
(HMChl) reductase
0.76 0.33 -0.33
23 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F
0.76 0.31 -0.31
24 AT2G31040 ATP synthase protein I -related 0.76 0.33 -0.33
25 AT1G29280 WRKY DNA-binding protein 65 WRKY DNA-BINDING PROTEIN 65, WRKY
DNA-binding protein 65
-0.76 0.3 -0.32
26 AT4G37200 Thioredoxin superfamily protein HIGH CHLOROPHYLL FLUORESCENCE 164 0.76 0.32 -0.31
27 AT3G10970 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
0.76 0.31 -0.33
28 AT4G18810 NAD(P)-binding Rossmann-fold superfamily protein 0.76 0.32 -0.31
29 AT2G30950 FtsH extracellular protease family FTSH2, VARIEGATED 2 0.75 0.3 -0.33
30 AT5G58140 phototropin 2 NON PHOTOTROPIC HYPOCOTYL 1-LIKE,
phototropin 2
0.75 0.31 -0.3
31 AT5G03900 Iron-sulphur cluster biosynthesis family protein 0.75 0.31 -0.3
32 AT5G14150 Protein of unknown function, DUF642 -0.75 0.32 -0.33
33 AT1G35340 ATP-dependent protease La (LON) domain protein 0.75 0.32 -0.3
34 AT2G30170 Protein phosphatase 2C family protein 0.75 0.31 -0.32
35 AT2G24270 aldehyde dehydrogenase 11A3 aldehyde dehydrogenase 11A3 0.74 0.34 -0.3
36 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5
0.74 0.33 -0.31
37 AT4G33510 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase
0.74 0.33 -0.3
38 AT3G10350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.74 0.31 -0.31
39 AT2G03390 uvrB/uvrC motif-containing protein 0.74 0.32 -0.29
40 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C
0.73 0.32 -0.31
41 AT5G61670 Encodes a close homolog of the Cauliflower OR (Orange)
protein. The function of OR is to induce the
differentiation of proplastids or other noncolored plastids
into chromoplasts for carotenoid accumulation. Both
proteins contain a Cysteine-rich zinc finger domain that is
highly specific to DnaJ-like molecular chaperons.
0.73 0.33 -0.32
42 AT1G49390 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
-0.73 0.31 -0.33
43 AT1G70820 phosphoglucomutase, putative / glucose phosphomutase,
putative
0.73 0.31 -0.32
44 AT3G19900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3067 (InterPro:IPR021420);
Has 276 Blast hits to 276 proteins in 83 species: Archae -
0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59;
Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
0.73 0.3 -0.33
45 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149
0.73 0.29 -0.31
46 AT3G53470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 35 Blast hits to 35 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.73 0.32 -0.31
47 AT5G06130 chaperone protein dnaJ-related 0.73 0.32 -0.31
48 AT4G19830 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein
0.73 0.3 -0.32
49 AT3G04870 zeta-carotene desaturase PIGMENT DEFECTIVE EMBRYO 181,
SPONTANEOUS CELL DEATH 1,
zeta-carotene desaturase
0.73 0.34 -0.31
50 AT1G24400 lysine histidine transporter 2 AMINO ACID TRANSPORTER-LIKE
PROTEIN 2, ARABIDOPSIS LYSINE
HISTIDINE TRANSPORTER 2, lysine
histidine transporter 2
0.72 0.31 -0.32
51 AT3G01510 like SEX4 1 like SEX4 1 0.72 0.31 -0.32
52 AT2G03390 uvrB/uvrC motif-containing protein 0.72 0.32 -0.34
53 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).
0.72 0.33 -0.31
54 AT3G23400 Plastid-lipid associated protein PAP / fibrillin family
protein
fibrillin 4 0.72 0.31 -0.3
55 AT2G27290 Protein of unknown function (DUF1279) 0.72 0.32 -0.33
56 AT2G17340 Uncharacterised conserved protein (UCP030210) 0.71 0.31 -0.33
57 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein 0.71 0.33 -0.29
58 AT3G15520 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein
0.71 0.3 -0.34
59 AT1G06690 NAD(P)-linked oxidoreductase superfamily protein 0.71 0.32 -0.31
60 AT1G67280 Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily protein
0.71 0.31 -0.31
61 AT5G58330 lactate/malate dehydrogenase family protein 0.71 0.31 -0.33
62 AT3G02830 zinc finger protein 1 zinc finger protein 1 0.71 0.32 -0.33
63 AT2G45990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 312
Blast hits to 312 proteins in 90 species: Archae - 0;
Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
0.71 0.31 -0.32
64 AT5G51020 crumpled leaf constitutive activator of
AAA-ATPase, CRUMPLED LEAF
0.7 0.32 -0.31
65 AT4G36530 alpha/beta-Hydrolases superfamily protein 0.7 0.31 -0.31
66 AT4G28410 Tyrosine transaminase family protein -0.7 0.34 -0.33
67 AT1G66330 senescence-associated family protein 0.7 0.3 -0.31
68 AT5G14690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits
to 86 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.7 0.31 -0.32
69 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 -0.7 0.32 -0.3
70 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1
-0.69 0.3 -0.32
71 AT1G01640 BTB/POZ domain-containing protein -0.69 0.31 -0.32
72 AT2G23840 HNH endonuclease 0.69 0.31 -0.33
73 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
0.69 0.31 -0.31
74 AT2G44790 uclacyanin 2 uclacyanin 2 -0.69 0.32 -0.31
75 AT5G03420 5'-AMP-activated protein kinase-related 0.69 0.31 -0.32
76 AT4G27390 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).
0.69 0.31 -0.3
77 AT4G32320 ascorbate peroxidase 6 ascorbate peroxidase 6 0.69 0.33 -0.31
78 AT2G31070 TCP domain protein 10 TCP domain protein 10 0.68 0.29 -0.3
79 AT1G54520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1517 (InterPro:IPR010903);
Has 276 Blast hits to 275 proteins in 83 species: Archae -
0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113;
Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
0.68 0.3 -0.31
80 AT1G33330 Class I peptide chain release factor 0.68 0.3 -0.31
81 AT2G29650 phosphate transporter 4;1 anion transporter 1, phosphate
transporter 4;1
0.68 0.32 -0.32
82 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE
0.68 0.33 -0.3
83 AT5G40510 Sucrase/ferredoxin-like family protein -0.68 0.32 -0.31
84 AT3G21760 UDP-Glycosyltransferase superfamily protein HYPOSTATIN RESISTANCE 1 0.68 0.33 -0.31
85 AT3G15300 VQ motif-containing protein -0.67 0.31 -0.31
86 AT4G08770 Peroxidase superfamily protein peroxidase 37 -0.67 0.31 -0.31
87 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.67 0.34 -0.32
88 AT1G50580 UDP-Glycosyltransferase superfamily protein -0.67 0.35 -0.3
89 AT5G20240 K-box region and MADS-box transcription factor family
protein
PISTILLATA -0.66 0.33 -0.3
90 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily
protein
-0.66 0.31 -0.3
91 AT1G13970 Protein of unknown function (DUF1336) -0.66 0.34 -0.32
92 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).
-0.66 0.31 -0.34
93 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.66 0.3 -0.33
94 AT4G32870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
-0.66 0.31 -0.33
95 AT5G01830 ARM repeat superfamily protein -0.66 0.33 -0.32
96 AT3G55720 Protein of unknown function (DUF620) -0.65 0.31 -0.32
97 AT2G32610 cellulose synthase-like B1 cellulose synthase-like B1,
CELLULOSE SYNTHASE LIKE B1,
CELLULOSE SYNTHASE LIKE B1,
cellulose synthase-like B1
-0.65 0.3 -0.3
98 AT5G57980 RNA polymerase II fifth largest subunit, C RNA polymerase II fifth largest
subunit, C
-0.65 0.32 -0.33
99 AT1G11670 MATE efflux family protein -0.65 0.31 -0.29
100 AT5G60760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.64 0.34 -0.3
101 AT2G43480 Peroxidase superfamily protein -0.64 0.32 -0.32
102 AT5G58750 NAD(P)-binding Rossmann-fold superfamily protein -0.64 0.34 -0.3
103 AT1G22880 cellulase 5 ARABIDOPSIS THALIANA CELLULASE 5,
ARABIDOPSIS THALIANA GLYCOSYL
HYDROLASE 9B4, cellulase 5
-0.64 0.31 -0.33
104 AT2G23050 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 4, NAKED PINS
IN YUC MUTANTS 4
-0.63 0.31 -0.3
105 AT1G44970 Peroxidase superfamily protein -0.63 0.3 -0.33
106 AT1G33800 Protein of unknown function (DUF579) -0.63 0.31 -0.32
107 AT2G14900 Gibberellin-regulated family protein -0.63 0.34 -0.32
108 AT2G35120 Single hybrid motif superfamily protein -0.63 0.29 -0.31
109 AT5G06800 myb-like HTH transcriptional regulator family protein -0.63 0.3 -0.32
110 AT2G04025 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
root meristem growth factor 3 -0.62 0.32 -0.3
111 AT4G14980 Cysteine/Histidine-rich C1 domain family protein -0.62 0.31 -0.32
112 AT3G26770 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.34 -0.31
113 AT2G25980 Mannose-binding lectin superfamily protein -0.62 0.31 -0.32
114 AT5G10280 myb domain protein 92 ATMYB64, myb domain protein 92,
myb domain protein 92
-0.61 0.33 -0.32
115 AT3G11550 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 2
-0.61 0.36 -0.32
116 AT5G01610 Protein of unknown function, DUF538 -0.6 0.31 -0.35
117 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2
-0.6 0.31 -0.29
118 AT2G47540 Pollen Ole e 1 allergen and extensin family protein -0.6 0.32 -0.32
119 AT1G67330 Protein of unknown function (DUF579) -0.6 0.31 -0.31
120 AT1G19600 pfkB-like carbohydrate kinase family protein -0.6 0.31 -0.31
121 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22
-0.6 0.32 -0.28
122 AT3G05920 Heavy metal transport/detoxification superfamily protein -0.6 0.32 -0.28
123 AT4G33100 CONTAINS InterPro DOMAIN/s: Mitochondrial
distribution/morphology family 35/apoptosis
(InterPro:IPR007918); Has 214 Blast hits to 214 proteins in
102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi
- 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6
(source: NCBI BLink).
-0.6 0.31 -0.3
124 AT4G39550 Galactose oxidase/kelch repeat superfamily protein -0.59 0.34 -0.34
125 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related
-0.59 0.3 -0.3
126 AT1G29270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits
to 98 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.59 0.33 -0.33
127 AT5G12970 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein
-0.59 0.32 -0.33
128 AT2G41780 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.59 0.3 -0.32
129 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5
-0.59 0.31 -0.32
130 AT2G25810 tonoplast intrinsic protein 4;1 tonoplast intrinsic protein 4;1 -0.59 0.31 -0.32
131 AT4G18510 CLAVATA3/ESR-related 2 CLAVATA3/ESR-related 2 -0.58 0.3 -0.3
132 AT5G10130 Pollen Ole e 1 allergen and extensin family protein -0.58 0.32 -0.31
133 AT5G13520 peptidase M1 family protein -0.58 0.3 -0.32
134 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.58 0.31 -0.3
135 AT3G49960 Peroxidase superfamily protein -0.58 0.34 -0.34
136 AT1G04610 YUCCA 3 YUCCA 3 -0.58 0.35 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
137 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell)
-0.7 0.44 -0.45 C0035