AT5G03240 : polyubiquitin 3
Query Information
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AGICode AT5G03240
Description polyubiquitin 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G03240 polyubiquitin 3 polyubiquitin 3 1 0.34 -0.31
2 AT1G52290 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 15, proline-rich
extensin-like receptor kinase 15		 -0.83 0.32 -0.3
3 AT5G55380 MBOAT (membrane bound O-acyl transferase) family protein -0.78 0.31 -0.3
4 AT3G29030 expansin A5 ARABIDOPSIS THALIANA EXPANSIN 5,
ARABIDOPSIS THALIANA EXPANSIN A5,
ATHEXP ALPHA 1.4, EXPANSIN 5,
expansin A5		 -0.78 0.32 -0.32
5 AT2G40080 Protein of unknown function (DUF1313) EARLY FLOWERING 4 0.78 0.33 -0.34
6 AT3G26570 phosphate transporter 2;1 ORF02, phosphate transporter 2;1 -0.77 0.32 -0.31
7 AT5G10540 Zincin-like metalloproteases family protein 0.77 0.3 -0.33
8 AT5G67380 casein kinase alpha 1 ATCKA1, casein kinase alpha 1 0.77 0.28 -0.31
9 AT1G48480 receptor-like kinase 1 receptor-like kinase 1 -0.75 0.33 -0.32
10 AT3G19910 RING/U-box superfamily protein 0.75 0.3 -0.34
11 AT5G57630 CBL-interacting protein kinase 21 CBL-interacting protein kinase 21,
SNF1-RELATED PROTEIN KINASE 3.4		 0.75 0.3 -0.33
12 AT1G33050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10470.1); Has 531 Blast hits to 229 proteins in
83 species: Archae - 0; Bacteria - 197; Metazoa - 59; Fungi
- 50; Plants - 48; Viruses - 0; Other Eukaryotes - 177
(source: NCBI BLink).		 0.74 0.33 -0.32
13 AT5G01530 light harvesting complex photosystem II light harvesting complex
photosystem II		 -0.73 0.31 -0.32
14 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 0.73 0.32 -0.3
15 AT2G19650 Cysteine/Histidine-rich C1 domain family protein -0.73 0.31 -0.3
16 AT4G12800 photosystem I subunit l photosystem I subunit l -0.73 0.32 -0.32
17 AT5G06270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G11600.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.72 0.3 -0.32
18 AT1G05890 RING/U-box superfamily protein ARIADNE 5, ARABIDOPSIS ARIADNE 5 0.72 0.3 -0.3
19 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 0.72 0.33 -0.3
20 AT4G28750 Photosystem I reaction centre subunit IV / PsaE protein PSA E1 KNOCKOUT -0.72 0.31 -0.33
21 AT5G20520 alpha/beta-Hydrolases superfamily protein WAVY GROWTH 2 0.72 0.32 -0.32
22 AT5G01015 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65295.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.72 0.31 -0.32
23 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 0.72 0.32 -0.32
24 AT4G13840 HXXXD-type acyl-transferase family protein -0.72 0.34 -0.32
25 AT2G46900 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix,
Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to
2464 proteins in 333 species: Archae - 2; Bacteria - 151;
Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47;
Other Eukaryotes - 1303 (source: NCBI BLink).		 0.71 0.31 -0.33
26 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 -0.71 0.32 -0.3
27 AT1G31420 Leucine-rich repeat protein kinase family protein FEI 1 -0.71 0.34 -0.33
28 AT5G14530 Transducin/WD40 repeat-like superfamily protein 0.71 0.31 -0.34
29 AT3G16140 photosystem I subunit H-1 photosystem I subunit H-1 -0.71 0.29 -0.31
30 AT2G42380 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP34, BZIP34 -0.71 0.31 -0.3
31 AT4G18170 WRKY DNA-binding protein 28 ATWRKY28, WRKY DNA-binding protein
28		 0.71 0.3 -0.3
32 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 0.71 0.31 -0.3
33 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 0.71 0.32 -0.32
34 AT5G52060 BCL-2-associated athanogene 1 BCL-2-associated athanogene 1,
BCL-2-associated athanogene 1		 -0.7 0.32 -0.29
35 AT4G24700 unknown protein; Has 20 Blast hits to 20 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.33
36 AT3G01060 unknown protein; Has 640 Blast hits to 638 proteins in 201
species: Archae - 0; Bacteria - 293; Metazoa - 0; Fungi -
71; Plants - 72; Viruses - 0; Other Eukaryotes - 204
(source: NCBI BLink).		 -0.7 0.31 -0.3
37 AT5G23060 calcium sensing receptor calcium sensing receptor -0.7 0.31 -0.31
38 AT1G44000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits
to 212 proteins in 76 species: Archae - 0; Bacteria - 96;
Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.7 0.32 -0.3
39 AT2G02020 Major facilitator superfamily protein AtPTR4, peptide transporter 4 -0.7 0.32 -0.32
40 AT3G46490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.32 -0.33
41 AT1G21270 wall-associated kinase 2 wall-associated kinase 2 -0.7 0.31 -0.34
42 AT1G44575 Chlorophyll A-B binding family protein CP22, NONPHOTOCHEMICAL QUENCHING
4, PHOTOSYSTEM II SUBUNIT S		 -0.7 0.33 -0.32
43 AT4G27130 Translation initiation factor SUI1 family protein 0.69 0.33 -0.32
44 AT1G75100 J-domain protein required for chloroplast accumulation
response 1		 J-domain protein required for
chloroplast accumulation response
1		 -0.69 0.3 -0.32
45 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 0.69 0.31 -0.31
46 AT4G31290 ChaC-like family protein 0.69 0.3 -0.31
47 AT5G64940 ABC2 homolog 13 ARABIDOPSIS THALIANA ABC2 HOMOLOG
13, ABC2 homolog 13, A. THALIANA
OXIDATIVE STRESS-RELATED ABC1-LIKE
PROTEIN 1, OXIDATIVE
STRESS-RELATED ABC1-LIKE PROTEIN 1		 -0.69 0.31 -0.32
48 AT4G37180 Homeodomain-like superfamily protein 0.69 0.31 -0.32
49 AT1G05340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 7 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast
hits to 189 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.34 -0.34
50 AT1G65295 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G01015.1); Has 90 Blast hits to 90
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.29 -0.33
51 AT5G17230 PHYTOENE SYNTHASE PHYTOENE SYNTHASE -0.69 0.33 -0.31
52 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 0.68 0.3 -0.32
53 AT5G11390 WPP domain-interacting protein 1 WPP domain-interacting protein 1 0.68 0.32 -0.31
54 AT3G21950 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.32 -0.33
55 AT3G60300 RWD domain-containing protein 0.68 0.35 -0.3
56 AT2G37460 nodulin MtN21 /EamA-like transporter family protein -0.68 0.31 -0.32
57 AT1G32080 membrane protein, putative AtLrgB, LrgB -0.68 0.31 -0.31
58 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.67 0.32 -0.3
59 AT2G34150 SCAR family protein ATRANGAP2, ATSCAR1, SCAR1,
WISKOTT-ALDRICH SYNDROME PROTEIN
FAMILY VERPROLIN HOMOLOGOUS
PROTEIN 1		 -0.67 0.32 -0.3
60 AT1G26665 Mediator complex, subunit Med10 0.67 0.32 -0.31
61 AT4G23250 kinases;protein kinases CYSTEINE-RICH RLK (RECEPTOR-LIKE
PROTEIN KINASE) 17, DUF26-21,
EMBRYO DEFECTIVE 1290,
RECEPTOR-LIKE KINASE
THALIANACOL-0GENOMICLIBRARY(CLONTE
CH).THEPOSITIVEPHAGECLONES
C-X8-C-X2-C CLASS 1		 -0.67 0.35 -0.3
62 AT4G21980 Ubiquitin-like superfamily protein AUTOPHAGY 8A, AUTOPHAGY-RELATED 8A 0.67 0.33 -0.32
63 AT1G31580 ECS1 CXC750, ECS1 -0.67 0.31 -0.31
64 AT3G21390 Mitochondrial substrate carrier family protein -0.67 0.35 -0.31
65 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 -0.67 0.33 -0.29
66 AT1G50600 scarecrow-like 5 scarecrow-like 5 0.67 0.3 -0.31
67 AT4G10300 RmlC-like cupins superfamily protein -0.67 0.32 -0.32
68 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 -0.67 0.32 -0.31
69 AT1G09770 cell division cycle 5 ARABIDOPSIS THALIANA CELL DIVISION
CYCLE 5, ARABIDOPSIS THALIANA MYB
DOMAIN CELL DIVISION CYCLE 5, cell
division cycle 5		 0.67 0.32 -0.3
70 AT2G38330 MATE efflux family protein -0.66 0.31 -0.32
71 AT4G39970 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.66 0.31 -0.32
72 AT5G55530 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.66 0.32 -0.3
73 AT1G79040 photosystem II subunit R photosystem II subunit R -0.66 0.31 -0.33
74 AT3G50970 dehydrin family protein LOW TEMPERATURE-INDUCED 30, XERO2 0.66 0.3 -0.33
75 AT5G42820 Zinc finger C-x8-C-x5-C-x3-H type family protein ATU2AF35B, U2AF35B 0.66 0.33 -0.32
76 AT5G08650 Small GTP-binding protein -0.66 0.32 -0.32
77 AT3G10020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 47 Blast hits to 47 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.33 -0.29
78 AT3G25910 Protein of unknown function (DUF1644) 0.65 0.33 -0.3
79 AT4G15910 drought-induced 21 drought-induced 21,
drought-induced 21		 0.65 0.29 -0.32
80 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 0.65 0.32 -0.3
81 AT5G47940 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.33 -0.32
82 AT3G01420 Peroxidase superfamily protein alpha-dioxygenase 1, DIOX1, DOX1,
plant alpha dioxygenase 1		 0.64 0.32 -0.32
83 AT2G40110 Yippee family putative zinc-binding protein 0.63 0.31 -0.31
84 AT2G28910 CAX interacting protein 4 CAX interacting protein 4 0.63 0.32 -0.33
85 AT3G62130 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 L-cysteine desulfhydrase 0.63 0.32 -0.31
86 AT1G78780 pathogenesis-related family protein 0.62 0.31 -0.32
87 AT2G29400 type one protein phosphatase 1 PROTEIN PHOSPHATASE 1, type one
protein phosphatase 1		 0.62 0.32 -0.32
88 AT4G05420 damaged DNA binding protein 1A damaged DNA binding protein 1A 0.62 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0059 Arginine amide - - - -0.75 0.43 -0.44