AT5G03550 : -
Query Information
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AGICode AT5G03550
Description BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G42460.1); Has 137 Blast hits to 125 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G03550 BEST Arabidopsis thaliana protein match is: TRAF-like
family protein (TAIR:AT2G42460.1); Has 137 Blast hits to
125 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 1 0.32 -0.32
2 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 0.66 0.34 -0.3
3 AT5G44770 Cysteine/Histidine-rich C1 domain family protein -0.59 0.33 -0.33
4 AT2G15340 glycine-rich protein -0.57 0.31 -0.32
5 AT1G47520 transposable element gene -0.56 0.32 -0.3
6 AT2G11370 transposable element gene -0.54 0.3 -0.32
7 AT4G17880 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC4 -0.53 0.32 -0.33
8 AT5G21050 LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 8 growth stages; CONTAINS InterPro
DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G64090.1); Has 206 Blast hits to 206 proteins in
60 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi
- 0; Plants - 50; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.52 0.33 -0.32
9 AT5G61800 Pentatricopeptide repeat (PPR) superfamily protein -0.52 0.31 -0.3
10 AT1G64020 Serine protease inhibitor (SERPIN) family protein -0.51 0.33 -0.32
11 AT5G38180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.51 0.3 -0.33
12 AT4G23970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.32 -0.31
13 AT1G37140 MEI2 C-terminal RRM only like 1 MEI2 C-terminal RRM only like 1 0.5 0.31 -0.3
14 AT2G16340 unknown protein; Has 64 Blast hits to 48 proteins in 21
species: Archae - 2; Bacteria - 36; Metazoa - 11; Fungi -
6; Plants - 3; Viruses - 2; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.5 0.31 -0.3
15 AT4G01500 AP2/B3-like transcriptional factor family protein NGATHA4 -0.5 0.31 -0.32
16 AT3G07530 CONTAINS InterPro DOMAIN/s: Beta-Casp domain
(InterPro:IPR022712); BEST Arabidopsis thaliana protein
match is: cleavage and polyadenylation specificity factor
73 kDa subunit-II (TAIR:AT2G01730.1); Has 624 Blast hits to
615 proteins in 160 species: Archae - 54; Bacteria - 6;
Metazoa - 333; Fungi - 44; Plants - 93; Viruses - 0; Other
Eukaryotes - 94 (source: NCBI BLink).		 0.49 0.31 -0.31
17 AT4G18350 nine-cis-epoxycarotenoid dioxygenase 2 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 2,
nine-cis-epoxycarotenoid
dioxygenase 2		 0.49 0.32 -0.32
18 AT3G01840 Protein kinase superfamily protein 0.49 0.3 -0.34
19 AT1G36620 transposable element gene 0.48 0.32 -0.34
20 AT1G32430 F-box and associated interaction domains-containing protein -0.48 0.31 -0.32
21 AT1G61440 S-locus lectin protein kinase family protein 0.48 0.34 -0.3
22 AT1G27410 DNA repair metallo-beta-lactamase family protein -0.47 0.31 -0.35
23 AT1G20380 Prolyl oligopeptidase family protein -0.46 0.31 -0.31
24 AT5G46100 Pentatricopeptide repeat (PPR) superfamily protein -0.46 0.3 -0.31
25 AT5G17910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G29620.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.46 0.31 -0.32
26 AT1G10800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: inflorescence meristem,
hypocotyl, root, flower; EXPRESSED DURING: petal
differentiation and expansion stage; Has 23 Blast hits to
23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.46 0.31 -0.33
27 AT5G29030 pseudogene, hypothetical protein -0.46 0.3 -0.33
28 AT3G45380 transposable element gene 0.46 0.33 -0.32
29 AT1G54880 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.46 0.31 -0.33
30 AT4G05570 transposable element gene -0.45 0.32 -0.28
31 AT1G55790 Domain of unknown function (DUF2431) 0.45 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
32 C0002 α-Lipoic acid (+/-)-α-Lipoic acid Lipoate cofactor of fatty acid biosynthesis 0.57 0.41 -0.47 C0002