AT5G02680 : -
Query Information
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AGICode AT5G02680
Description LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to 252 proteins in 89 species: Archae - 0; Bacteria - 71; Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 1 0.3 -0.31
2 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein 0.71 0.33 -0.31
3 AT4G02430 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34b,
Serine/Arginine-Rich Protein
Splicing Factor 34b		 0.7 0.32 -0.31
4 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.69 0.31 -0.31
5 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 0.68 0.32 -0.29
6 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.66 0.33 -0.34
7 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 -0.66 0.32 -0.3
8 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.64 0.33 -0.29
9 AT1G41900 transposable element gene 0.64 0.31 -0.31
10 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.64 0.3 -0.3
11 AT2G17975 zinc finger (Ran-binding) family protein 0.63 0.31 -0.35
12 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.62 0.31 -0.3
13 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 0.62 0.31 -0.31
14 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.62 0.3 -0.32
15 AT3G17090 Protein phosphatase 2C family protein -0.62 0.31 -0.28
16 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.32 -0.31
17 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.61 0.33 -0.31
18 AT3G31340 transposable element gene 0.61 0.32 -0.33
19 AT2G05270 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.31 -0.33
20 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.61 0.32 -0.3
21 AT1G27520 Glycosyl hydrolase family 47 protein 0.61 0.31 -0.3
22 AT4G00760 pseudo-response regulator 8 pseudo-response regulator 8,
PSEUDO-RESPONSE REGULATOR 8		 0.6 0.29 -0.33
23 AT2G46560 transducin family protein / WD-40 repeat family protein 0.6 0.31 -0.28
24 AT3G25020 receptor like protein 42 receptor like protein 42, receptor
like protein 42		 0.6 0.3 -0.31
25 AT5G62760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.32 -0.31
26 AT5G56470 FAD-dependent oxidoreductase family protein -0.6 0.31 -0.31
27 AT1G22860 Vacuolar sorting protein 39 0.59 0.31 -0.3
28 AT3G06990 Cysteine/Histidine-rich C1 domain family protein -0.59 0.3 -0.31
29 AT3G61010 Ferritin/ribonucleotide reductase-like family protein 0.59 0.33 -0.33
30 AT3G13190 Plant protein of unknown function (DUF827) 0.59 0.32 -0.32
31 AT2G44240 Protein of Unknown Function (DUF239) -0.59 0.31 -0.32
32 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.3 -0.32
33 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.58 0.31 -0.31
34 AT3G15390 silencing defective 5 silencing defective 5 0.58 0.31 -0.33
35 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 0.58 0.3 -0.31
36 AT5G13020 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML3, EMSY-like 3 0.57 0.31 -0.33
37 AT1G22275 Myosin heavy chain-related protein ZYP1, ZYP1b 0.57 0.31 -0.32
38 AT1G47520 transposable element gene -0.57 0.3 -0.32
39 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 0.56 0.3 -0.32
40 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.56 0.33 -0.32
41 AT5G59940 Cysteine/Histidine-rich C1 domain family protein -0.55 0.27 -0.34
42 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 0.55 0.3 -0.31
43 AT2G06140 transposable element gene 0.55 0.33 -0.31
44 AT1G05670 Pentatricopeptide repeat (PPR-like) superfamily protein 0.55 0.32 -0.3
45 AT5G07430 Pectin lyase-like superfamily protein -0.55 0.33 -0.31
46 AT1G52920 G protein coupled receptor G-PROTEIN COUPLED RECEPTOR 2, G
protein coupled receptor		 0.55 0.3 -0.31
47 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E 0.55 0.32 -0.31
48 AT5G58100 unknown protein; INVOLVED IN: pollen exine formation;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.54 0.31 -0.31
49 AT2G32600 hydroxyproline-rich glycoprotein family protein -0.54 0.32 -0.3
50 AT5G53670 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.54 0.32 -0.31
51 AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 9,
nine-cis-epoxycarotenoid
dioxygenase 9		 -0.54 0.31 -0.31
52 AT3G14300 pectinesterase family protein A. THALIANA PECTIN METHYLESTERASE
26, ATPMEPCRC, PECTIN
METHYLESTERASE 26		 0.54 0.31 -0.33
53 AT3G48120 unknown protein; Has 22990 Blast hits to 12942 proteins in
666 species: Archae - 8; Bacteria - 739; Metazoa - 13803;
Fungi - 2465; Plants - 1363; Viruses - 116; Other
Eukaryotes - 4496 (source: NCBI BLink).		 0.53 0.33 -0.3
54 AT3G42300 transposable element gene 0.53 0.34 -0.31
55 ATMG00470 hypothetical protein ORF122A 0.53 0.33 -0.29
56 AT5G65130 Integrase-type DNA-binding superfamily protein -0.53 0.31 -0.32
57 AT4G07890 transposable element gene -0.53 0.29 -0.3
58 AT1G65950 Protein kinase superfamily protein 0.53 0.3 -0.31
59 AT5G03360 DC1 domain-containing protein -0.52 0.31 -0.32
60 AT5G35270 transposable element gene 0.52 0.31 -0.31
61 AT5G26610 D111/G-patch domain-containing protein 0.52 0.32 -0.32
62 AT5G62030 diphthamide synthesis DPH2 family protein -0.52 0.31 -0.31
63 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.35
64 AT3G42060 myosin heavy chain-related 0.52 0.3 -0.31
65 AT5G55330 MBOAT (membrane bound O-acyl transferase) family protein -0.52 0.33 -0.32
66 AT4G03850 transposable element gene -0.52 0.33 -0.31
67 AT2G02350 SKP1 interacting partner 3 Phloem protein 2-B9, SKP1
interacting partner 3		 0.52 0.35 -0.32
68 AT3G12100 Cation efflux family protein 0.52 0.31 -0.31
69 AT1G13630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.52 0.29 -0.32
70 AT5G37140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.3 -0.31
71 AT1G05040 BEST Arabidopsis thaliana protein match is:
Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1); Has
14 Blast hits to 12 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.32 -0.3
72 AT5G07420 Pectin lyase-like superfamily protein -0.51 0.31 -0.29
73 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.51 0.32 -0.31
74 AT4G23580 Galactose oxidase/kelch repeat superfamily protein -0.51 0.32 -0.31
75 AT2G17770 basic region/leucine zipper motif 27 basic region/leucine zipper motif
27, basic region/leucine zipper
motif 27, FD PARALOG		 -0.5 0.32 -0.32
76 AT3G07140 GPI transamidase component Gpi16 subunit family protein -0.5 0.31 -0.34
77 AT3G29070 emp24/gp25L/p24 family/GOLD family protein -0.5 0.29 -0.32
78 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 0.5 0.32 -0.29
79 AT2G04560 transferases, transferring glycosyl groups AtLpxB, lipid X B 0.5 0.33 -0.33
80 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.5 0.3 -0.28
81 AT1G78700 BES1/BZR1 homolog 4 BES1/BZR1 homolog 4 -0.49 0.3 -0.31
82 AT2G45580 cytochrome P450, family 76, subfamily C, polypeptide 3 cytochrome P450, family 76,
subfamily C, polypeptide 3		 -0.49 0.3 -0.32
83 AT2G04063 glycine-rich protein -0.49 0.31 -0.33
84 AT1G06750 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.49 0.33 -0.33
85 AT2G36180 EF hand calcium-binding protein family -0.48 0.35 -0.33
86 AT3G18220 Phosphatidic acid phosphatase (PAP2) family protein -0.47 0.32 -0.32
87 AT5G01980 RING/U-box superfamily protein -0.47 0.34 -0.3
88 AT1G63110 GPI transamidase subunit PIG-U -0.47 0.32 -0.34
89 AT3G42120 transposable element gene -0.47 0.32 -0.34
90 AT5G51810 gibberellin 20 oxidase 2 AT2353, ATGA20OX2, gibberellin 20
oxidase 2		 -0.47 0.31 -0.3
91 AT4G04660 pseudogene, hypothetical protein, similar to zinc finger
protein (Arabidopsis thaliana) GI:976277		 -0.47 0.31 -0.35
92 AT3G07830 Pectin lyase-like superfamily protein -0.47 0.3 -0.3
93 AT2G20660 ralf-like 14 ralf-like 14 -0.46 0.32 -0.33
94 AT3G22770 F-box associated ubiquitination effector family protein -0.46 0.31 -0.33
95 AT2G34870 hydroxyproline-rich glycoprotein family protein maternal effect embryo arrest 26 -0.46 0.32 -0.31
96 AT1G59800 Cullin family protein -0.46 0.31 -0.32
97 AT1G02813 Protein of unknown function, DUF538 -0.46 0.3 -0.3
98 AT5G58520 Protein kinase superfamily protein -0.46 0.31 -0.34
99 AT3G01020 ISCU-like 2 ISCU-LIKE 2, ISCU-like 2 -0.46 0.3 -0.31
100 AT1G44070 transposable element gene -0.46 0.31 -0.3