AGICode | AT5G01830 |
Description | ARM repeat superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G01830 | ARM repeat superfamily protein | 1 | 0.33 | -0.33 | |||
2 | AT5G16540 | zinc finger nuclease 3 | zinc finger nuclease 3 | -0.79 | 0.28 | -0.32 | ||
3 | AT2G45770 | signal recognition particle receptor protein, chloroplast (FTSY) |
CPFTSY, FERRIC CHELATE REDUCTASE DEFECTIVE 4 |
-0.76 | 0.31 | -0.3 | ||
4 | AT2G26330 | Leucine-rich receptor-like protein kinase family protein | ERECTA, QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1 |
-0.75 | 0.3 | -0.31 | ||
5 | AT1G08320 | bZIP transcription factor family protein | bZIP21, TGACG (TGA) motif-binding protein 9 |
0.74 | 0.33 | -0.3 | ||
6 | AT1G78170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.3 | -0.31 | |||
7 | AT2G05620 | proton gradient regulation 5 | proton gradient regulation 5 | -0.73 | 0.31 | -0.32 | ||
8 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
-0.73 | 0.32 | -0.34 | |||
9 | AT4G29690 | Alkaline-phosphatase-like family protein | 0.73 | 0.33 | -0.32 | |||
10 | AT4G39460 | S-adenosylmethionine carrier 1 | S-adenosylmethionine carrier 1, SAM TRANSPORTER1 |
-0.72 | 0.33 | -0.31 | ||
11 | AT3G08010 | RNA binding | ATAB2 | -0.72 | 0.32 | -0.33 | ||
12 | AT1G32200 | phospholipid/glycerol acyltransferase family protein | ACYLTRANSFERASE 1, ATS1 | -0.72 | 0.31 | -0.29 | ||
13 | AT3G15110 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.72 | 0.31 | -0.33 | |||
14 | AT5G24300 | Glycogen/starch synthases, ADP-glucose type | STARCH SYNTHASE 1, starch synthase 1 |
-0.72 | 0.34 | -0.33 | ||
15 | AT5G57960 | GTP-binding protein, HflX | -0.72 | 0.31 | -0.31 | |||
16 | AT2G43535 | Scorpion toxin-like knottin superfamily protein | 0.72 | 0.32 | -0.32 | |||
17 | AT1G54820 | Protein kinase superfamily protein | -0.72 | 0.32 | -0.31 | |||
18 | AT5G66550 | Maf-like protein | -0.72 | 0.33 | -0.31 | |||
19 | AT5G44380 | FAD-binding Berberine family protein | 0.71 | 0.32 | -0.31 | |||
20 | AT5G42765 | INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.71 | 0.34 | -0.3 | |||
21 | AT5G20550 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.71 | 0.33 | -0.31 | |||
22 | AT5G47380 | Protein of unknown function, DUF547 | -0.71 | 0.32 | -0.31 | |||
23 | AT1G11580 | methylesterase PCR A | ATPMEPCRA, methylesterase PCR A | 0.71 | 0.34 | -0.33 | ||
24 | AT4G01480 | pyrophosphorylase 5 | pyrophosphorylase 5, pyrophosphorylase 5 |
0.71 | 0.3 | -0.31 | ||
25 | AT3G26744 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
A. THALIANA INDUCER OF CBP EXPRESSION 1, INDUCER OF CBF EXPRESSION 1, SCREAM |
-0.71 | 0.32 | -0.31 | ||
26 | AT5G06750 | Protein phosphatase 2C family protein | 0.71 | 0.31 | -0.32 | |||
27 | AT4G24900 | unknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.71 | 0.32 | -0.35 | |||
28 | AT2G31070 | TCP domain protein 10 | TCP domain protein 10 | -0.7 | 0.33 | -0.29 | ||
29 | AT3G49900 | Phototropic-responsive NPH3 family protein | -0.7 | 0.3 | -0.32 | |||
30 | AT3G13790 | Glycosyl hydrolases family 32 protein | ATBFRUCT1, ARABIDOPSIS THALIANA CELL WALL INVERTASE 1 |
0.7 | 0.34 | -0.32 | ||
31 | AT5G27560 | Domain of unknown function (DUF1995) | -0.7 | 0.32 | -0.31 | |||
32 | AT4G19830 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
-0.7 | 0.29 | -0.31 | |||
33 | AT3G10230 | lycopene cyclase | AtLCY, lycopene cyclase | -0.69 | 0.32 | -0.28 | ||
34 | AT2G04700 | ferredoxin thioredoxin reductase catalytic beta chain family protein |
-0.69 | 0.31 | -0.3 | |||
35 | AT5G06290 | 2-cysteine peroxiredoxin B | 2-cysteine peroxiredoxin B, 2-CYS PEROXIREDOXIN B |
-0.69 | 0.32 | -0.33 | ||
36 | AT3G49650 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.69 | 0.33 | -0.32 | |||
37 | AT1G32220 | NAD(P)-binding Rossmann-fold superfamily protein | -0.69 | 0.32 | -0.33 | |||
38 | AT3G59110 | Protein kinase superfamily protein | -0.69 | 0.32 | -0.32 | |||
39 | AT5G65410 | homeobox protein 25 | ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25, homeobox protein 25, ZINC FINGER HOMEODOMAIN 2, ZINC FINGER HOMEODOMAIN 1 |
-0.69 | 0.32 | -0.31 | ||
40 | AT3G49260 | IQ-domain 21 | IQ-domain 21 | -0.69 | 0.33 | -0.31 | ||
41 | AT5G53210 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
SPEECHLESS | -0.69 | 0.31 | -0.29 | ||
42 | AT1G29280 | WRKY DNA-binding protein 65 | WRKY DNA-BINDING PROTEIN 65, WRKY DNA-binding protein 65 |
0.69 | 0.32 | -0.3 | ||
43 | AT2G01880 | purple acid phosphatase 7 | PURPLE ACID PHOSPHATASE 7, purple acid phosphatase 7 |
0.69 | 0.3 | -0.34 | ||
44 | AT2G41800 | Protein of unknown function, DUF642 | 0.69 | 0.32 | -0.32 | |||
45 | AT2G38330 | MATE efflux family protein | -0.68 | 0.31 | -0.32 | |||
46 | AT4G28680 | L-tyrosine decarboxylase | L-tyrosine decarboxylase, L-TYROSINE DECARBOXYLASE 1 |
-0.68 | 0.33 | -0.31 | ||
47 | AT1G18060 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.68 | 0.33 | -0.3 | |||
48 | AT2G28800 | 63 kDa inner membrane family protein | ALBINO 3 | -0.68 | 0.3 | -0.33 | ||
49 | AT1G12330 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
-0.68 | 0.34 | -0.32 | |||
50 | AT1G68780 | RNI-like superfamily protein | -0.68 | 0.33 | -0.31 | |||
51 | AT5G03900 | Iron-sulphur cluster biosynthesis family protein | -0.68 | 0.3 | -0.33 | |||
52 | AT4G29030 | Putative membrane lipoprotein | -0.68 | 0.3 | -0.32 | |||
53 | AT2G37585 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.68 | 0.31 | -0.32 | |||
54 | AT4G14210 | phytoene desaturase 3 | PIGMENT DEFECTIVE 226, PHYTOENE DESATURASE, phytoene desaturase 3 |
-0.68 | 0.3 | -0.31 | ||
55 | AT5G08650 | Small GTP-binding protein | -0.68 | 0.3 | -0.32 | |||
56 | AT3G63410 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
ALBINO OR PALE GREEN MUTANT 1, E37, INNER ENVELOPE PROTEIN 37, VITAMIN E DEFECTIVE 3 |
-0.68 | 0.34 | -0.32 | ||
57 | AT5G22620 | phosphoglycerate/bisphosphoglycerate mutase family protein | -0.68 | 0.3 | -0.32 | |||
58 | AT1G51805 | Leucine-rich repeat protein kinase family protein | -0.67 | 0.31 | -0.32 | |||
59 | AT4G36530 | alpha/beta-Hydrolases superfamily protein | -0.67 | 0.34 | -0.33 | |||
60 | AT2G38460 | iron regulated 1 | ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 1, FERROPORTIN 1, iron regulated 1 |
-0.67 | 0.31 | -0.32 | ||
61 | AT4G34610 | BEL1-like homeodomain 6 | BEL1-like homeodomain 6 | -0.67 | 0.31 | -0.3 | ||
62 | AT3G43540 | Protein of unknown function (DUF1350) | -0.67 | 0.32 | -0.3 | |||
63 | AT5G17670 | alpha/beta-Hydrolases superfamily protein | -0.67 | 0.31 | -0.31 | |||
64 | AT2G45190 | Plant-specific transcription factor YABBY family protein | ABNORMAL FLORAL ORGANS, FILAMENTOUS FLOWER, YABBY1 |
-0.67 | 0.31 | -0.32 | ||
65 | AT5G59250 | Major facilitator superfamily protein | -0.67 | 0.32 | -0.33 | |||
66 | AT1G32080 | membrane protein, putative | AtLrgB, LrgB | -0.67 | 0.33 | -0.33 | ||
67 | AT1G70070 | DEAD/DEAH box helicase, putative | EMBRYO DEFECTIVE 25, INCREASED SIZE EXCLUSION LIMIT 2, PIGMENT DEFECTIVE 317 |
-0.66 | 0.27 | -0.3 | ||
68 | AT1G77490 | thylakoidal ascorbate peroxidase | thylakoidal ascorbate peroxidase | -0.66 | 0.3 | -0.32 | ||
69 | AT3G26060 | Thioredoxin superfamily protein | ATPRX Q, peroxiredoxin Q | -0.66 | 0.3 | -0.31 | ||
70 | AT3G16290 | AAA-type ATPase family protein | embryo defective 2083 | -0.66 | 0.31 | -0.33 | ||
71 | AT1G02910 | tetratricopeptide repeat (TPR)-containing protein | LOW PSII ACCUMULATION1 | -0.66 | 0.31 | -0.3 | ||
72 | AT3G61250 | myb domain protein 17 | myb domain protein 17, LATE MERISTEM IDENTITY2, myb domain protein 17 |
-0.66 | 0.3 | -0.33 | ||
73 | AT5G47960 | RAB GTPase homolog A4C | RAB GTPase homolog A4C, RAB GTPase homolog A4C, SMALL MOLECULAR WEIGHT G-PROTEIN 1 |
0.66 | 0.31 | -0.29 | ||
74 | AT3G16460 | Mannose-binding lectin superfamily protein | jacalin-related lectin 34 | 0.66 | 0.3 | -0.31 | ||
75 | AT1G16080 | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
-0.66 | 0.3 | -0.29 | |||
76 | AT2G29360 | NAD(P)-binding Rossmann-fold superfamily protein | -0.66 | 0.31 | -0.31 | |||
77 | AT2G39140 | pseudouridine synthase family protein | PIGMENT DEFECTIVE 328, SUPPRESSOR OF VARIEGATION 1 |
-0.66 | 0.31 | -0.31 | ||
78 | AT5G35970 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.66 | 0.3 | -0.31 | |||
79 | AT3G19200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.33 | -0.33 | |||
80 | AT2G31400 | genomes uncoupled 1 | genomes uncoupled 1 | -0.66 | 0.34 | -0.32 | ||
81 | AT5G04440 | Protein of unknown function (DUF1997) | -0.66 | 0.31 | -0.31 | |||
82 | AT5G66800 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.34 | -0.31 | |||
83 | AT5G48910 | Pentatricopeptide repeat (PPR) superfamily protein | LOW PSII ACCUMULATION 66 | -0.65 | 0.32 | -0.32 | ||
84 | AT4G01310 | Ribosomal L5P family protein | -0.65 | 0.33 | -0.35 | |||
85 | AT3G15690 | Single hybrid motif superfamily protein | -0.65 | 0.3 | -0.34 | |||
86 | AT1G01640 | BTB/POZ domain-containing protein | 0.65 | 0.34 | -0.3 | |||
87 | AT3G04940 | cysteine synthase D1 | CYSTEINE SYNTHASE D1, cysteine synthase D1 |
-0.65 | 0.33 | -0.32 | ||
88 | AT4G26520 | Aldolase superfamily protein | -0.65 | 0.33 | -0.33 | |||
89 | AT3G52960 | Thioredoxin superfamily protein | -0.65 | 0.33 | -0.31 | |||
90 | AT2G01400 | unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.32 | -0.31 | |||
91 | AT4G09580 | SNARE associated Golgi protein family | -0.65 | 0.33 | -0.34 | |||
92 | AT3G15520 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
-0.65 | 0.33 | -0.3 | |||
93 | AT1G35340 | ATP-dependent protease La (LON) domain protein | -0.65 | 0.31 | -0.31 | |||
94 | AT3G16450 | Mannose-binding lectin superfamily protein | Jacalin-related lectin 33 | 0.65 | 0.34 | -0.33 | ||
95 | AT3G21710 | unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.33 | -0.3 | |||
96 | AT1G74730 | Protein of unknown function (DUF1118) | -0.65 | 0.33 | -0.3 | |||
97 | AT5G51100 | Fe superoxide dismutase 2 | Fe superoxide dismutase 2 | -0.65 | 0.31 | -0.33 | ||
98 | AT1G31410 | putrescine-binding periplasmic protein-related | -0.65 | 0.33 | -0.33 | |||
99 | AT4G10300 | RmlC-like cupins superfamily protein | -0.65 | 0.33 | -0.29 | |||
100 | AT5G37740 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.65 | 0.31 | -0.32 | |||
101 | AT1G28390 | Protein kinase superfamily protein | 0.65 | 0.32 | -0.32 | |||
102 | AT4G01800 | Albino or Glassy Yellow 1 | Albino or Glassy Yellow 1, Arabidopsis thaliana chloroplast SecA, SECA1 |
-0.65 | 0.31 | -0.3 | ||
103 | AT5G06300 | Putative lysine decarboxylase family protein | LONELY GUY 7 | 0.64 | 0.31 | -0.3 | ||
104 | AT4G08780 | Peroxidase superfamily protein | 0.64 | 0.32 | -0.31 | |||
105 | AT1G07260 | UDP-glucosyl transferase 71C3 | UDP-glucosyl transferase 71C3 | 0.63 | 0.32 | -0.32 | ||
106 | AT5G20240 | K-box region and MADS-box transcription factor family protein |
PISTILLATA | 0.63 | 0.32 | -0.33 | ||
107 | AT5G48110 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
0.63 | 0.31 | -0.31 | |||
108 | AT3G21420 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
LATERAL BRANCHING OXIDOREDUCTASE 1 | 0.63 | 0.31 | -0.29 | ||
109 | AT2G47130 | NAD(P)-binding Rossmann-fold superfamily protein | AtSDR3, short-chain dehydrogenase/reductase 2 |
0.62 | 0.31 | -0.32 | ||
110 | AT5G65640 | beta HLH protein 93 | beta HLH protein 93 | 0.62 | 0.31 | -0.3 | ||
111 | AT4G17800 | Predicted AT-hook DNA-binding family protein | 0.62 | 0.33 | -0.3 | |||
112 | AT5G12330 | Lateral root primordium (LRP) protein-related | LATERAL ROOT PRIMORDIUM 1 | 0.61 | 0.32 | -0.3 | ||
113 | AT2G05910 | Protein of unknown function (DUF567) | 0.61 | 0.32 | -0.31 | |||
114 | AT3G19390 | Granulin repeat cysteine protease family protein | 0.61 | 0.32 | -0.32 | |||
115 | AT1G23120 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.6 | 0.31 | -0.32 | |||
116 | AT5G05460 | Glycosyl hydrolase family 85 | AtENGase85A, Endo-beta-N-acetyglucosaminidase 85A |
0.6 | 0.31 | -0.3 | ||
117 | AT4G08770 | Peroxidase superfamily protein | peroxidase 37 | 0.6 | 0.31 | -0.33 | ||
118 | AT1G69050 | unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.29 | -0.31 | |||
119 | AT5G05900 | UDP-Glycosyltransferase superfamily protein | 0.6 | 0.31 | -0.33 | |||
120 | AT2G47460 | myb domain protein 12 | MYB DOMAIN PROTEIN 12, myb domain protein 12, PRODUCTION OF FLAVONOL GLYCOSIDES 1 |
0.59 | 0.32 | -0.3 | ||
121 | AT2G18390 | ADP-ribosylation factor family protein | ARF-LIKE 2, ATARLC1, HALLIMASCH, TITAN 5 |
0.59 | 0.3 | -0.29 | ||
122 | AT2G30340 | LOB domain-containing protein 13 | LOB domain-containing protein 13 | 0.59 | 0.3 | -0.32 | ||
123 | AT2G41070 | Basic-leucine zipper (bZIP) transcription factor family protein |
ATBZIP12, DPBF4, ENHANCED EM LEVEL | 0.59 | 0.32 | -0.33 | ||
124 | AT2G03830 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 8 | 0.58 | 0.3 | -0.33 | ||
125 | AT1G50560 | cytochrome P450, family 705, subfamily A, polypeptide 25 | cytochrome P450, family 705, subfamily A, polypeptide 25 |
0.58 | 0.31 | -0.31 | ||
126 | AT1G26680 | transcriptional factor B3 family protein | 0.58 | 0.33 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
127 | C0119 | Indole-3-ylmethyl-glucosinolate | - | indol-3-ylmethyl glucosinolate | indole glucosinolate breakdown (active in intact plant cell), indole glucosinolate breakdown (insect chewing induced), glucosinolate biosynthesis from tryptophan |
0.7 | 0.44 | -0.45 | ||
128 | C0185 | MST_3139.9 | - | - | - | 0.68 | 0.45 | -0.42 | ||
129 | C0025 | 2-Hydroxy-3-butenylglucosinolate | (R),(S)-2-Hydroxy-3-butenylglucosinolate | 2-hydroxy-3-butenylglucosinolate | glucosinolate biosynthesis from dihomomethionine | 0.63 | 0.44 | -0.42 |