AT5G01530 : light harvesting complex photosystem II
Query Information
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AGICode AT5G01530
Description light harvesting complex photosystem II
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G01530 light harvesting complex photosystem II light harvesting complex
photosystem II		 1 0.32 -0.33
2 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.95 0.3 -0.33
3 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast PIGMENT DEFECTIVE 334 0.94 0.31 -0.32
4 AT1G15820 light harvesting complex photosystem II subunit 6 CP24, light harvesting complex
photosystem II subunit 6		 0.94 0.31 -0.32
5 AT4G05180 photosystem II subunit Q-2 PHOTOSYSTEM II SUBUNIT Q,
photosystem II subunit Q-2, PSII-Q		 0.94 0.31 -0.32
6 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.94 0.29 -0.32
7 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.94 0.33 -0.33
8 AT2G42220 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.94 0.32 -0.31
9 AT5G54270 light-harvesting chlorophyll B-binding protein 3 light-harvesting chlorophyll
B-binding protein 3, LHCB3*1		 0.94 0.3 -0.31
10 AT1G52230 photosystem I subunit H2 PHOTOSYSTEM I SUBUNIT H-2,
photosystem I subunit H2, PSI-H		 0.93 0.32 -0.34
11 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.93 0.33 -0.33
12 AT3G56940 dicarboxylate diiron protein, putative (Crd1) ACSF, CHL27, COPPER RESPONSE
DEFECT 1		 0.93 0.31 -0.31
13 AT1G61520 photosystem I light harvesting complex gene 3 photosystem I light harvesting
complex gene 3		 0.93 0.32 -0.32
14 AT1G55670 photosystem I subunit G photosystem I subunit G 0.93 0.31 -0.33
15 AT1G08380 photosystem I subunit O photosystem I subunit O 0.92 0.31 -0.34
16 AT1G06680 photosystem II subunit P-1 OXYGEN EVOLVING COMPLEX SUBUNIT 23
KDA, OXYGEN-EVOLVING ENHANCER
PROTEIN 2, photosystem II subunit
P-1, PHOTOSYSTEM II SUBUNIT P		 0.92 0.33 -0.32
17 AT3G47470 light-harvesting chlorophyll-protein complex I subunit A4 CAB4, light-harvesting
chlorophyll-protein complex I
subunit A4		 0.92 0.35 -0.32
18 AT3G15360 thioredoxin M-type 4 ATHM4, ARABIDOPSIS THIOREDOXIN
M-TYPE 4, thioredoxin M-type 4		 0.92 0.28 -0.32
19 AT2G46820 photosystem I P subunit PSAP, photosystem I P subunit,
PLASTID TRANSCRIPTIONALLY ACTIVE
8, THYLAKOID MEMBRANE
PHOSPHOPROTEIN OF 14 KDA		 0.92 0.31 -0.32
20 AT2G20260 photosystem I subunit E-2 photosystem I subunit E-2 0.92 0.3 -0.34
21 AT3G54890 photosystem I light harvesting complex gene 1 photosystem I light harvesting
complex gene 1		 0.91 0.31 -0.3
22 AT1G30380 photosystem I subunit K photosystem I subunit K 0.91 0.31 -0.33
23 AT5G66570 PS II oxygen-evolving complex 1 MANGANESE-STABILIZING PROTEIN 1,
OXYGEN EVOLVING COMPLEX 33
KILODALTON PROTEIN, 33 KDA OXYGEN
EVOLVING POLYPEPTIDE 1, OXYGEN
EVOLVING ENHANCER PROTEIN 33, PS
II OXYGEN-EVOLVING COMPLEX 1, PS
II oxygen-evolving complex 1		 0.91 0.32 -0.3
24 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 LEAF FNR 1,
ferredoxin-NADP(+)-oxidoreductase
1		 0.91 0.32 -0.34
25 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.33 -0.3
26 AT1G74470 Pyridine nucleotide-disulphide oxidoreductase family
protein		 0.91 0.33 -0.3
27 AT4G12800 photosystem I subunit l photosystem I subunit l 0.91 0.31 -0.3
28 AT1G03680 thioredoxin M-type 1 thioredoxin M-type 1, ARABIDOPSIS
THIOREDOXIN M-TYPE 1, thioredoxin
M-type 1, THIOREDOXIN M-TYPE 1		 0.91 0.32 -0.3
29 AT4G21280 photosystem II subunit QA PHOTOSYSTEM II SUBUNIT Q,
PHOTOSYSTEM II SUBUNIT Q-1,
photosystem II subunit QA		 0.91 0.29 -0.31
30 AT2G47450 chloroplast signal recognition particle component (CAO) CHAOS, CHLOROPLAST SIGNAL
RECOGNITION PARTICLE 43		 0.9 0.34 -0.33
31 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 glyceraldehyde 3-phosphate
dehydrogenase A subunit 2		 0.9 0.29 -0.31
32 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.9 0.34 -0.32
33 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.9 0.31 -0.31
34 AT3G08940 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.9 0.32 -0.3
35 AT1G32550 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 1 0.9 0.31 -0.34
36 AT3G54050 high cyclic electron flow 1 high cyclic electron flow 1 0.9 0.32 -0.31
37 AT3G16140 photosystem I subunit H-1 photosystem I subunit H-1 0.9 0.32 -0.29
38 AT2G30570 photosystem II reaction center W photosystem II reaction center W 0.9 0.32 -0.3
39 AT2G06520 photosystem II subunit X photosystem II subunit X 0.9 0.31 -0.32
40 AT3G59400 enzyme binding;tetrapyrrole binding GENOMES UNCOUPLED 4 0.9 0.31 -0.34
41 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein 0.9 0.31 -0.32
42 AT4G15510 Photosystem II reaction center PsbP family protein 0.9 0.36 -0.31
43 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.9 0.32 -0.32
44 AT5G57030 Lycopene beta/epsilon cyclase protein LUTEIN DEFICIENT 2 0.9 0.29 -0.32
45 AT4G03280 photosynthetic electron transfer C photosynthetic electron transfer
C, PROTON GRADIENT REGULATION 1		 0.89 0.3 -0.34
46 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.89 0.31 -0.3
47 AT3G21055 photosystem II subunit T photosystem II subunit T 0.89 0.31 -0.32
48 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.89 0.3 -0.32
49 AT2G39730 rubisco activase rubisco activase 0.89 0.29 -0.31
50 AT1G03600 photosystem II family protein PSB27 0.89 0.31 -0.32
51 AT3G50820 photosystem II subunit O-2 OXYGEN EVOLVING COMPLEX SUBUNIT 33
KDA, PHOTOSYSTEM II SUBUNIT O-2,
photosystem II subunit O-2		 0.89 0.32 -0.3
52 AT1G79040 photosystem II subunit R photosystem II subunit R 0.89 0.32 -0.31
53 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.89 0.31 -0.31
54 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 42 Blast hits to 42 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.89 0.34 -0.31
55 AT5G19940 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.89 0.33 -0.31
56 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.89 0.31 -0.31
57 AT1G74730 Protein of unknown function (DUF1118) 0.89 0.3 -0.3
58 AT5G55230 microtubule-associated proteins 65-1 microtubule-associated proteins
65-1, MAP65-1,
microtubule-associated proteins
65-1		 0.89 0.32 -0.32
59 AT3G16000 MAR binding filament-like protein 1 MAR binding filament-like protein
1		 0.89 0.28 -0.31
60 AT3G02730 thioredoxin F-type 1 ATF1, thioredoxin F-type 1 0.89 0.34 -0.29
61 AT1G03630 protochlorophyllide oxidoreductase C protochlorophyllide oxidoreductase
C, PORC		 0.89 0.32 -0.31
62 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.89 0.3 -0.33
63 AT3G55800 sedoheptulose-bisphosphatase sedoheptulose-bisphosphatase 0.89 0.31 -0.33
64 AT5G44190 GOLDEN2-like 2 ATGLK2, GOLDEN2-like 2, GBF'S
PRO-RICH REGION-INTERACTING FACTOR
2		 0.88 0.31 -0.31
65 AT3G12780 phosphoglycerate kinase 1 phosphoglycerate kinase 1 0.88 0.3 -0.32
66 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.34 -0.31
67 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.88 0.3 -0.32
68 AT4G01050 thylakoid rhodanese-like thylakoid rhodanese-like 0.88 0.32 -0.31
69 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.88 0.31 -0.33
70 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.88 0.31 -0.32
71 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.87 0.3 -0.33
72 AT4G27440 protochlorophyllide oxidoreductase B protochlorophyllide oxidoreductase
B		 0.87 0.32 -0.31
73 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.87 0.3 -0.32
74 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.87 0.31 -0.32
75 AT4G10340 light harvesting complex of photosystem II 5 light harvesting complex of
photosystem II 5		 0.87 0.3 -0.32
76 AT5G46110 Glucose-6-phosphate/phosphate translocator-related ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT 2, triose-phosphate
⁄ phosphate translocator		 0.87 0.29 -0.32
77 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.87 0.32 -0.32
78 AT5G13630 magnesium-chelatase subunit chlH, chloroplast, putative /
Mg-protoporphyrin IX chelatase, putative (CHLH)		 ABA-BINDING PROTEIN, CONDITIONAL
CHLORINA, CCH1, H SUBUNIT OF
MG-CHELATASE, GENOMES UNCOUPLED 5		 0.87 0.31 -0.32
79 AT5G64040 photosystem I reaction center subunit PSI-N, chloroplast,
putative / PSI-N, putative (PSAN)		 PSAN 0.87 0.32 -0.32
80 AT1G20340 Cupredoxin superfamily protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 112, PLASTOCYANIN 2		 0.87 0.31 -0.33
81 AT5G51545 low psii accumulation2 low psii accumulation2 0.87 0.3 -0.31
82 AT3G19480 D-3-phosphoglycerate dehydrogenase 0.86 0.33 -0.31
83 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit glyceraldehyde 3-phosphate
dehydrogenase A subunit,
GLYCERALDEHYDE 3-PHOSPHATE
DEHYDROGENASE A SUBUNIT 1		 0.86 0.32 -0.32
84 AT5G07020 proline-rich family protein 0.86 0.3 -0.31
85 AT1G54780 thylakoid lumen 18.3 kDa protein AtTLP18.3, thylakoid lumen protein
18.3		 0.86 0.3 -0.3
86 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR
region		 protein containing PDZ domain, a
K-box domain, and a TPR region		 0.86 0.3 -0.3
87 AT2G28930 protein kinase 1B protein kinase 1B, protein kinase
1B		 0.86 0.31 -0.33
88 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 0.86 0.33 -0.32
89 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.86 0.33 -0.29
90 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.86 0.32 -0.32
91 AT4G10300 RmlC-like cupins superfamily protein 0.86 0.32 -0.31
92 AT1G63840 RING/U-box superfamily protein -0.82 0.31 -0.32
93 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.82 0.3 -0.29
94 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.8 0.32 -0.3
95 AT1G45145 thioredoxin H-type 5 THIOREDOXIN H-TYPE 5, thioredoxin
H-type 5, LOCUS OF INSENSITIVITY
TO VICTORIN 1, thioredoxin H-type
5		 -0.8 0.28 -0.32
96 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.79 0.31 -0.31
97 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.79 0.32 -0.3
98 AT4G15610 Uncharacterised protein family (UPF0497) -0.76 0.33 -0.31
99 AT2G39350 ABC-2 type transporter family protein ATP-binding cassette G1 -0.76 0.3 -0.34
100 AT4G14010 ralf-like 32 ralf-like 32 -0.73 0.33 -0.32
101 AT5G03240 polyubiquitin 3 polyubiquitin 3 -0.73 0.3 -0.3
102 AT4G09030 arabinogalactan protein 10 arabinogalactan protein 10,
ATAGP10		 -0.73 0.32 -0.31
103 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 -0.73 0.32 -0.33
104 AT3G10450 serine carboxypeptidase-like 7 serine carboxypeptidase-like 7 -0.71 0.3 -0.3
105 AT5G49880 mitotic checkpoint family protein -0.7 0.32 -0.31
106 AT5G37540 Eukaryotic aspartyl protease family protein -0.7 0.3 -0.31