AT5G01660 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G01660
Description CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G01660 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Development/cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST
Arabidopsis thaliana protein match is: DCD (Development and
Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133
Blast hits to 7053 proteins in 482 species: Archae - 40;
Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants -
1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI
BLink).
1 0.32 -0.31
2 AT1G26560 beta glucosidase 40 beta glucosidase 40 0.77 0.33 -0.32
3 AT4G02610 Aldolase-type TIM barrel family protein 0.72 0.31 -0.32
4 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B -0.71 0.31 -0.31
5 AT5G14450 GDSL-like Lipase/Acylhydrolase superfamily protein 0.68 0.31 -0.33
6 AT5G54310 ARF-GAP domain 5 ARF-GAP domain 5, NEVERSHED -0.67 0.31 -0.32
7 AT4G19140 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.67 0.32 -0.31
8 AT5G49930 zinc knuckle (CCHC-type) family protein embryo defective 1441 -0.67 0.32 -0.3
9 AT5G54660 HSP20-like chaperones superfamily protein 0.67 0.29 -0.3
10 AT5G15460 membrane-anchored ubiquitin-fold protein 2 membrane-anchored ubiquitin-fold
protein 2
0.67 0.31 -0.31
11 AT5G63120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.66 0.3 -0.32
12 AT2G27600 AAA-type ATPase family protein ATSKD1, SUPPRESSOR OF K+ TRANSPORT
GROWTH DEFECT1, VACUOLAR PROTEIN
SORTING 4
-0.66 0.33 -0.3
13 AT2G27200 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.65 0.31 -0.32
14 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1
-0.65 0.33 -0.3
15 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.32 -0.33
16 AT3G61860 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31,
arginine/serine-rich splicing
factor 31, arginine/serine-rich
splicing factor 31
0.64 0.33 -0.3
17 AT5G20610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits
to 759 proteins in 180 species: Archae - 6; Bacteria - 105;
Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other
Eukaryotes - 282 (source: NCBI BLink).
-0.63 0.3 -0.32
18 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.63 0.31 -0.33
19 AT2G24762 glutamine dumper 4 glutamine dumper 4, glutamine
dumper 4
0.63 0.3 -0.33
20 AT5G08630 DDT domain-containing protein -0.63 0.3 -0.33
21 AT1G10970 zinc transporter 4 precursor ATZIP4, zinc transporter 4
precursor
0.62 0.32 -0.31
22 AT3G59390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2054
(InterPro:IPR019352); Has 184 Blast hits to 184 proteins in
72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).
0.62 0.29 -0.32
23 AT3G45190 SIT4 phosphatase-associated family protein -0.61 0.31 -0.29
24 AT2G23180 cytochrome P450, family 96, subfamily A, polypeptide 1 cytochrome P450, family 96,
subfamily A, polypeptide 1
0.61 0.31 -0.31
25 AT3G11850 Protein of unknown function, DUF593 -0.61 0.3 -0.32
26 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3
0.61 0.34 -0.31
27 AT5G59480 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein
-0.61 0.31 -0.31
28 AT4G37790 Homeobox-leucine zipper protein family HAT22 0.61 0.32 -0.32
29 AT5G27930 Protein phosphatase 2C family protein -0.61 0.3 -0.31
30 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 0.61 0.29 -0.31
31 AT5G23800 DOMAIN OF UNKNOWN FUNCTION 724 10 DOMAIN OF UNKNOWN FUNCTION 724 10,
DOMAIN OF UNKNOWN FUNCTION 724 10
0.6 0.33 -0.3
32 AT5G50840 CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).
-0.6 0.32 -0.34
33 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.59 0.31 -0.34
34 AT2G39480 P-glycoprotein 6 ATP-binding cassette B6,
P-glycoprotein 6
-0.59 0.31 -0.32
35 AT5G27360 Major facilitator superfamily protein SFP2 0.59 0.34 -0.32
36 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein -0.59 0.33 -0.28
37 AT4G38870 F-box and associated interaction domains-containing protein 0.58 0.31 -0.32
38 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C
-0.58 0.31 -0.3
39 AT5G41810 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits
to 690 proteins in 132 species: Archae - 0; Bacteria - 38;
Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other
Eukaryotes - 485 (source: NCBI BLink).
-0.58 0.31 -0.31
40 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 -0.58 0.3 -0.33
41 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 -0.58 0.34 -0.31
42 AT5G39850 Ribosomal protein S4 0.58 0.33 -0.31
43 AT2G44980 SNF2 domain-containing protein / helicase domain-containing
protein
ALTERED SEED GERMINATION 3 0.58 0.29 -0.3
44 AT4G02075 RING/FYVE/PHD zinc finger superfamily protein pitchoun 1 0.58 0.31 -0.31
45 AT1G74300 alpha/beta-Hydrolases superfamily protein 0.58 0.32 -0.31
46 AT1G64050 unknown protein; Has 524 Blast hits to 342 proteins in 101
species: Archae - 0; Bacteria - 106; Metazoa - 106; Fungi -
24; Plants - 25; Viruses - 0; Other Eukaryotes - 263
(source: NCBI BLink).
-0.57 0.33 -0.32
47 AT1G55170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast
hits to 8993 proteins in 828 species: Archae - 344;
Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants -
683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI
BLink).
-0.57 0.34 -0.29
48 AT1G71800 cleavage stimulating factor 64 cleavage stimulating factor 64 -0.57 0.32 -0.33
49 AT3G50960 phosducin-like protein 3 homolog phosducin-like protein 3 homolog -0.57 0.32 -0.32
50 AT5G58600 Plant protein of unknown function (DUF828) POWDERY MILDEW RESISTANT 5,
TRICHOME BIREFRINGENCE-LIKE 44
-0.57 0.32 -0.29
51 AT5G66810 CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif
(InterPro:IPR006595); BEST Arabidopsis thaliana protein
match is: LisH and RanBPM domains containing protein
(TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in
88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi
- 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).
-0.57 0.31 -0.29
52 AT5G57785 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.57 0.32 -0.33
53 AT3G02200 Proteasome component (PCI) domain protein -0.57 0.33 -0.31
54 AT3G50130 Plant protein of unknown function (DUF247) -0.56 0.32 -0.35
55 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 0.56 0.31 -0.31
56 AT1G76950 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain
PRAF1 -0.56 0.35 -0.31
57 AT5G48400 Glutamate receptor family protein ATGLR1.2, GLUTAMATE RECEPTOR 1.2 -0.56 0.31 -0.35
58 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 -0.56 0.32 -0.32
59 AT4G16745 Exostosin family protein 0.56 0.33 -0.33
60 AT4G25780 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein
0.56 0.32 -0.31
61 AT2G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: Protein of unknown function DUF2359, transmembrane
(TAIR:AT1G23170.2); Has 27 Blast hits to 27 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.56 0.32 -0.31
62 AT4G01210 glycosyl transferase family 1 protein -0.56 0.36 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
63 C0243 Succinic acid - Succinate flavonol biosynthesis,
glyoxylate cycle,
gibberellin biosynthesis III (early C-13 hydroxylation),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
aerobic respiration (alternative oxidase pathway),
gibberellin inactivation I (2beta-hydroxylation),
4-aminobutyrate degradation IV,
luteolin biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
leucodelphinidin biosynthesis,
glutamate degradation IV,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
succinate + a ubiquinone -> a ubiquinol + fumarate,
gibberellin biosynthesis II (early C-3 hydroxylation),
flavonoid biosynthesis,
superpathway of glyoxylate cycle and fatty acid degradation,
aerobic respiration (cytochrome c),
leucopelargonidin and leucocyanidin biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
scopoletin biosynthesis
-0.6 0.34 -0.3 C0243