AGICode | AT5G01660 |
Description | CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G01660 | CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: DCD (Development and Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133 Blast hits to 7053 proteins in 482 species: Archae - 40; Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants - 1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI BLink). |
1 | 0.32 | -0.31 | |||
2 | AT1G26560 | beta glucosidase 40 | beta glucosidase 40 | 0.77 | 0.33 | -0.32 | ||
3 | AT4G02610 | Aldolase-type TIM barrel family protein | 0.72 | 0.31 | -0.32 | |||
4 | AT4G02350 | exocyst complex component sec15B | exocyst complex component sec15B | -0.71 | 0.31 | -0.31 | ||
5 | AT5G14450 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.68 | 0.31 | -0.33 | |||
6 | AT5G54310 | ARF-GAP domain 5 | ARF-GAP domain 5, NEVERSHED | -0.67 | 0.31 | -0.32 | ||
7 | AT4G19140 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.67 | 0.32 | -0.31 | |||
8 | AT5G49930 | zinc knuckle (CCHC-type) family protein | embryo defective 1441 | -0.67 | 0.32 | -0.3 | ||
9 | AT5G54660 | HSP20-like chaperones superfamily protein | 0.67 | 0.29 | -0.3 | |||
10 | AT5G15460 | membrane-anchored ubiquitin-fold protein 2 | membrane-anchored ubiquitin-fold protein 2 |
0.67 | 0.31 | -0.31 | ||
11 | AT5G63120 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.66 | 0.3 | -0.32 | |||
12 | AT2G27600 | AAA-type ATPase family protein | ATSKD1, SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1, VACUOLAR PROTEIN SORTING 4 |
-0.66 | 0.33 | -0.3 | ||
13 | AT2G27200 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.65 | 0.31 | -0.32 | |||
14 | AT3G01150 | polypyrimidine tract-binding protein 1 | POLYPYRIMIDINE TRACT-BINDING PROTEIN 1, polypyrimidine tract-binding protein 1 |
-0.65 | 0.33 | -0.3 | ||
15 | AT1G74750 | Pentatricopeptide repeat (PPR) superfamily protein | -0.64 | 0.32 | -0.33 | |||
16 | AT3G61860 | RNA-binding (RRM/RBD/RNP motifs) family protein | arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31 |
0.64 | 0.33 | -0.3 | ||
17 | AT5G20610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). |
-0.63 | 0.3 | -0.32 | |||
18 | AT5G41940 | Ypt/Rab-GAP domain of gyp1p superfamily protein | -0.63 | 0.31 | -0.33 | |||
19 | AT2G24762 | glutamine dumper 4 | glutamine dumper 4, glutamine dumper 4 |
0.63 | 0.3 | -0.33 | ||
20 | AT5G08630 | DDT domain-containing protein | -0.63 | 0.3 | -0.33 | |||
21 | AT1G10970 | zinc transporter 4 precursor | ATZIP4, zinc transporter 4 precursor |
0.62 | 0.32 | -0.31 | ||
22 | AT3G59390 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 184 Blast hits to 184 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
0.62 | 0.29 | -0.32 | |||
23 | AT3G45190 | SIT4 phosphatase-associated family protein | -0.61 | 0.31 | -0.29 | |||
24 | AT2G23180 | cytochrome P450, family 96, subfamily A, polypeptide 1 | cytochrome P450, family 96, subfamily A, polypeptide 1 |
0.61 | 0.31 | -0.31 | ||
25 | AT3G11850 | Protein of unknown function, DUF593 | -0.61 | 0.3 | -0.32 | |||
26 | AT4G24260 | glycosyl hydrolase 9A3 | glycosyl hydrolase 9A3, glycosyl hydrolase 9A3, KOR3 |
0.61 | 0.34 | -0.31 | ||
27 | AT5G59480 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.61 | 0.31 | -0.31 | |||
28 | AT4G37790 | Homeobox-leucine zipper protein family | HAT22 | 0.61 | 0.32 | -0.32 | ||
29 | AT5G27930 | Protein phosphatase 2C family protein | -0.61 | 0.3 | -0.31 | |||
30 | AT4G28270 | RING membrane-anchor 2 | ATRMA2, RING membrane-anchor 2 | 0.61 | 0.29 | -0.31 | ||
31 | AT5G23800 | DOMAIN OF UNKNOWN FUNCTION 724 10 | DOMAIN OF UNKNOWN FUNCTION 724 10, DOMAIN OF UNKNOWN FUNCTION 724 10 |
0.6 | 0.33 | -0.3 | ||
32 | AT5G50840 | CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.6 | 0.32 | -0.34 | |||
33 | AT5G11780 | unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.34 | |||
34 | AT2G39480 | P-glycoprotein 6 | ATP-binding cassette B6, P-glycoprotein 6 |
-0.59 | 0.31 | -0.32 | ||
35 | AT5G27360 | Major facilitator superfamily protein | SFP2 | 0.59 | 0.34 | -0.32 | ||
36 | AT1G34220 | Regulator of Vps4 activity in the MVB pathway protein | -0.59 | 0.33 | -0.28 | |||
37 | AT4G38870 | F-box and associated interaction domains-containing protein | 0.58 | 0.31 | -0.32 | |||
38 | AT5G03520 | RAB GTPase homolog 8C | ARABIDOPSIS RAB HOMOLOG E1D, RAB GTPase homolog 8C, ATRABE1D, RAB HOMOLOG E1D, RAB GTPase homolog 8C |
-0.58 | 0.31 | -0.3 | ||
39 | AT5G41810 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). |
-0.58 | 0.31 | -0.31 | |||
40 | AT1G56450 | 20S proteasome beta subunit G1 | 20S proteasome beta subunit G1 | -0.58 | 0.3 | -0.33 | ||
41 | AT3G12680 | floral homeotic protein (HUA1) | ENHANCER OF AG-4 1 | -0.58 | 0.34 | -0.31 | ||
42 | AT5G39850 | Ribosomal protein S4 | 0.58 | 0.33 | -0.31 | |||
43 | AT2G44980 | SNF2 domain-containing protein / helicase domain-containing protein |
ALTERED SEED GERMINATION 3 | 0.58 | 0.29 | -0.3 | ||
44 | AT4G02075 | RING/FYVE/PHD zinc finger superfamily protein | pitchoun 1 | 0.58 | 0.31 | -0.31 | ||
45 | AT1G74300 | alpha/beta-Hydrolases superfamily protein | 0.58 | 0.32 | -0.31 | |||
46 | AT1G64050 | unknown protein; Has 524 Blast hits to 342 proteins in 101 species: Archae - 0; Bacteria - 106; Metazoa - 106; Fungi - 24; Plants - 25; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). |
-0.57 | 0.33 | -0.32 | |||
47 | AT1G55170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast hits to 8993 proteins in 828 species: Archae - 344; Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI BLink). |
-0.57 | 0.34 | -0.29 | |||
48 | AT1G71800 | cleavage stimulating factor 64 | cleavage stimulating factor 64 | -0.57 | 0.32 | -0.33 | ||
49 | AT3G50960 | phosducin-like protein 3 homolog | phosducin-like protein 3 homolog | -0.57 | 0.32 | -0.32 | ||
50 | AT5G58600 | Plant protein of unknown function (DUF828) | POWDERY MILDEW RESISTANT 5, TRICHOME BIREFRINGENCE-LIKE 44 |
-0.57 | 0.32 | -0.29 | ||
51 | AT5G66810 | CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). |
-0.57 | 0.31 | -0.29 | |||
52 | AT5G57785 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.57 | 0.32 | -0.33 | |||
53 | AT3G02200 | Proteasome component (PCI) domain protein | -0.57 | 0.33 | -0.31 | |||
54 | AT3G50130 | Plant protein of unknown function (DUF247) | -0.56 | 0.32 | -0.35 | |||
55 | AT5G34940 | glucuronidase 3 | glucuronidase 3, glucuronidase 3 | 0.56 | 0.31 | -0.31 | ||
56 | AT1G76950 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
PRAF1 | -0.56 | 0.35 | -0.31 | ||
57 | AT5G48400 | Glutamate receptor family protein | ATGLR1.2, GLUTAMATE RECEPTOR 1.2 | -0.56 | 0.31 | -0.35 | ||
58 | AT2G17270 | phosphate transporter 3;3 | phosphate transporter 3;3 | -0.56 | 0.32 | -0.32 | ||
59 | AT4G16745 | Exostosin family protein | 0.56 | 0.33 | -0.33 | |||
60 | AT4G25780 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
0.56 | 0.32 | -0.31 | |||
61 | AT2G18070 | unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF2359, transmembrane (TAIR:AT1G23170.2); Has 27 Blast hits to 27 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.32 | -0.31 | |||
62 | AT4G01210 | glycosyl transferase family 1 protein | -0.56 | 0.36 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
63 | C0243 | Succinic acid | - | Succinate | flavonol biosynthesis, glyoxylate cycle, gibberellin biosynthesis III (early C-13 hydroxylation), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), aerobic respiration (alternative oxidase pathway), gibberellin inactivation I (2beta-hydroxylation), 4-aminobutyrate degradation IV, luteolin biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), leucodelphinidin biosynthesis, glutamate degradation IV, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), succinate + a ubiquinone -> a ubiquinol + fumarate, gibberellin biosynthesis II (early C-3 hydroxylation), flavonoid biosynthesis, superpathway of glyoxylate cycle and fatty acid degradation, aerobic respiration (cytochrome c), leucopelargonidin and leucocyanidin biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), scopoletin biosynthesis |
-0.6 | 0.34 | -0.3 |