AT3G63490 : EMBRYO DEFECTIVE 3126
Query Information
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AGICode AT3G63490
Description Ribosomal protein L1p/L10e family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G63490 Ribosomal protein L1p/L10e family EMBRYO DEFECTIVE 3126 1 0.31 -0.3
2 AT4G01310 Ribosomal L5P family protein 0.94 0.33 -0.31
3 AT3G27160 Ribosomal protein S21 family protein GLUCOSE HYPERSENSITIVE 1 0.93 0.31 -0.34
4 AT1G17650 glyoxylate reductase 2 glyoxylate reductase 2, GLYOXYLATE
REDUCTASE 2		 0.92 0.31 -0.31
5 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.9 0.31 -0.31
6 AT5G27560 Domain of unknown function (DUF1995) 0.9 0.31 -0.32
7 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 0.9 0.32 -0.33
8 AT4G39460 S-adenosylmethionine carrier 1 S-adenosylmethionine carrier 1,
SAM TRANSPORTER1		 0.88 0.31 -0.3
9 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.32 -0.3
10 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 0.88 0.32 -0.31
11 AT5G16390 chloroplastic acetylcoenzyme A carboxylase 1 BIOTIN CARBOXYL CARRIER PROTEIN,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
chloroplastic acetylcoenzyme A
carboxylase 1, CAC1-A, CAC1A		 0.88 0.32 -0.32
12 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 0.88 0.32 -0.32
13 AT3G63190 ribosome recycling factor, chloroplast precursor Arabidopsis thaliana chloroplast
ribosome recycling factor,
chloroplast ribosome recycling
factor, HIGH CHLOROPHYLL
FLUORESCENCE AND PALE GREEN MUTANT
108, ribosome recycling factor,
chloroplast precursor		 0.88 0.31 -0.34
14 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.88 0.31 -0.3
15 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.87 0.31 -0.32
16 AT4G17560 Ribosomal protein L19 family protein 0.87 0.31 -0.3
17 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.87 0.32 -0.3
18 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.87 0.31 -0.3
19 AT4G24770 31-kDa RNA binding protein ARABIDOPSIS THALIANA RNA BINDING
PROTEIN, APPROXIMATELY 31 KD,
ATRBP33, CP31, 31-kDa RNA binding
protein		 0.87 0.32 -0.32
20 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.86 0.31 -0.31
21 AT2G48070 resistance to phytophthora 1 RESISTANCE TO PHYTOPHTHORA 1 0.86 0.31 -0.31
22 AT5G47110 Chlorophyll A-B binding family protein LIL3:2 0.86 0.32 -0.3
23 AT3G52960 Thioredoxin superfamily protein 0.86 0.31 -0.31
24 AT2G45770 signal recognition particle receptor protein, chloroplast
(FTSY)		 CPFTSY, FERRIC CHELATE REDUCTASE
DEFECTIVE 4		 0.86 0.3 -0.3
25 AT5G39830 Trypsin family protein with PDZ domain DEG8, DEG PROTEASE 8 0.86 0.33 -0.29
26 AT2G44920 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.31 -0.3
27 AT5G63310 nucleoside diphosphate kinase 2 ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE
KINASE 2, NUCLEOSIDE DIPHOSPHATE
KINASE IA, NDPK IA IA, NDP KINASE
1A, nucleoside diphosphate kinase
2		 0.86 0.32 -0.32
28 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.86 0.32 -0.3
29 AT5G46420 16S rRNA processing protein RimM family 0.86 0.33 -0.33
30 AT3G62030 rotamase CYP 4 cyclophilin 20-3, rotamase CYP 4 0.85 0.31 -0.3
31 AT3G26060 Thioredoxin superfamily protein ATPRX Q, peroxiredoxin Q 0.85 0.33 -0.31
32 AT3G15520 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.85 0.32 -0.33
33 AT3G18390 CRS1 / YhbY (CRM) domain-containing protein embryo defective 1865 0.85 0.31 -0.31
34 AT5G08650 Small GTP-binding protein 0.85 0.32 -0.3
35 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.85 0.33 -0.32
36 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.84 0.31 -0.31
37 AT3G02660 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial EMBRYO DEFECTIVE 2768 0.84 0.31 -0.31
38 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3082
(InterPro:IPR021434); Has 77 Blast hits to 77 proteins in
38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi -
0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.84 0.33 -0.32
39 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GIANT CHLOROPLAST 1, SULA 0.84 0.34 -0.3
40 AT2G39190 Protein kinase superfamily protein ATATH8 0.84 0.32 -0.3
41 AT4G00180 Plant-specific transcription factor YABBY family protein YABBY3 0.83 0.32 -0.34
42 AT3G58070 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS 0.83 0.3 -0.32
43 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.83 0.32 -0.3
44 AT2G26550 heme oxygenase 2 heme oxygenase 2 0.83 0.31 -0.33
45 AT2G41680 NADPH-dependent thioredoxin reductase C NADPH-dependent thioredoxin
reductase C		 0.83 0.3 -0.29
46 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.83 0.31 -0.31
47 AT2G44870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 15 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.33 -0.32
48 AT5G14260 Rubisco methyltransferase family protein 0.82 0.29 -0.3
49 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.82 0.3 -0.32
50 AT1G21350 Thioredoxin superfamily protein 0.82 0.3 -0.33
51 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.82 0.28 -0.32
52 AT1G11870 Seryl-tRNA synthetase ATSRS, ovule abortion 7,
Seryl-tRNA synthetase		 0.82 0.32 -0.31
53 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.82 0.33 -0.31
54 AT3G50790 esterase/lipase/thioesterase family protein 0.82 0.31 -0.33
55 AT2G22230 Thioesterase superfamily protein 0.82 0.31 -0.31
56 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma,
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 81
Blast hits to 81 proteins in 28 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.82 0.32 -0.33
57 AT1G74850 plastid transcriptionally active 2 PIGMENT DEFECTIVE 343, plastid
transcriptionally active 2		 0.82 0.3 -0.33
58 AT3G46630 Protein of unknown function (DUF3223) 0.82 0.3 -0.31
59 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.82 0.31 -0.31
60 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.81 0.32 -0.3
61 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein embryo sac development arrest 3 0.81 0.31 -0.29
62 AT1G01090 pyruvate dehydrogenase E1 alpha pyruvate dehydrogenase E1 alpha 0.81 0.29 -0.32
63 AT1G72970 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 embryo sac development arrest 17,
HOTHEAD		 0.81 0.33 -0.32
64 AT3G08010 RNA binding ATAB2 0.81 0.3 -0.31
65 AT1G32220 NAD(P)-binding Rossmann-fold superfamily protein 0.81 0.31 -0.3
66 AT4G17810 C2H2 and C2HC zinc fingers superfamily protein 0.81 0.32 -0.33
67 AT5G19940 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.81 0.32 -0.3
68 AT1G69740 Aldolase superfamily protein HEMB1 0.81 0.31 -0.33
69 AT4G33760 tRNA synthetase class II (D, K and N) family protein 0.81 0.28 -0.3
70 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3		 0.81 0.32 -0.32
71 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 -0.78 0.33 -0.31
72 AT3G26590 MATE efflux family protein -0.76 0.33 -0.34
73 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.75 0.29 -0.33
74 AT5G44380 FAD-binding Berberine family protein -0.74 0.3 -0.32
75 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 -0.74 0.31 -0.31
76 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.73 0.33 -0.34
77 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.72 0.32 -0.31
78 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.72 0.3 -0.31
79 AT4G23700 cation/H+ exchanger 17 cation/H+ exchanger 17, cation/H+
exchanger 17		 -0.71 0.3 -0.3
80 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.71 0.32 -0.31
81 AT2G02990 ribonuclease 1 RIBONUCLEASE 1, ribonuclease 1 -0.7 0.31 -0.32
82 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 -0.7 0.36 -0.32
83 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 -0.7 0.31 -0.31
84 AT4G34600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane
system; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: M germinated pollen stage, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.7 0.32 -0.31
85 AT4G20110 VACUOLAR SORTING RECEPTOR 7 binding protein of 80 kDa 3;1,
VACUOLAR SORTING RECEPTOR 3;1,
VACUOLAR SORTING RECEPTOR 7		 -0.7 0.31 -0.31
86 AT1G69526 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.31 -0.32
87 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 -0.69 0.31 -0.3
88 AT4G11350 Protein of unknown function (DUF604) -0.68 0.32 -0.32
89 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.33 -0.3
90 AT5G59520 ZRT/IRT-like protein 2 ZRT/IRT-like protein 2 -0.66 0.32 -0.32
91 AT5G59530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.34 -0.3
92 AT3G15300 VQ motif-containing protein -0.65 0.32 -0.32
93 AT1G01640 BTB/POZ domain-containing protein -0.65 0.3 -0.31
94 AT4G13235 embryo sac development arrest 21 embryo sac development arrest 21 -0.65 0.32 -0.31
95 AT4G28410 Tyrosine transaminase family protein -0.64 0.33 -0.33
96 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 -0.64 0.3 -0.31
97 AT5G43780 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS4 -0.63 0.3 -0.33
98 AT5G65640 beta HLH protein 93 beta HLH protein 93 -0.63 0.32 -0.34
99 AT3G15510 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 56, NAC domain containing
protein 2, NAC domain containing
protein 2, NAC-REGULATED SEED
MORPHOLOGY 1		 -0.63 0.32 -0.31
100 AT5G65210 bZIP transcription factor family protein TGA1 -0.62 0.35 -0.31
101 AT1G44970 Peroxidase superfamily protein -0.62 0.32 -0.34
102 AT4G10380 NOD26-like intrinsic protein 5;1 AtNIP5;1, NOD26-like intrinsic
protein 5;1, NOD26-LIKE MIP 6,
NOD26-LIKE MIP 8		 -0.62 0.32 -0.35
103 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 -0.62 0.3 -0.31
104 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.61 0.31 -0.33
105 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.61 0.32 -0.32