AT5G01270 : ATCPL2
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT5G01270
Description carboxyl-terminal domain (ctd) phosphatase-like 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G01270 carboxyl-terminal domain (ctd) phosphatase-like 2 ATCPL2, carboxyl-terminal domain
(ctd) phosphatase-like 2		 1 0.31 -0.33
2 AT4G13790 SAUR-like auxin-responsive protein family -0.77 0.32 -0.33
3 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 -0.75 0.29 -0.32
4 AT1G71940 SNARE associated Golgi protein family -0.75 0.31 -0.3
5 AT3G05750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G26910.1); Has 2317
Blast hits to 1467 proteins in 247 species: Archae - 4;
Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180;
Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).		 0.74 0.31 -0.29
6 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.29 -0.32
7 AT3G60260 ELMO/CED-12 family protein -0.72 0.33 -0.34
8 AT3G55600 Membrane fusion protein Use1 -0.72 0.32 -0.3
9 AT1G71810 Protein kinase superfamily protein 0.72 0.31 -0.31
10 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.7 0.33 -0.29
11 AT1G15290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7 0.3 -0.33
12 AT1G04140 Transducin family protein / WD-40 repeat family protein 0.7 0.31 -0.31
13 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.69 0.31 -0.3
14 AT5G46780 VQ motif-containing protein -0.68 0.34 -0.32
15 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 0.68 0.32 -0.34
16 AT5G51750 subtilase 1.3 subtilase 1.3, subtilase 1.3 0.68 0.33 -0.34
17 AT3G62490 transposable element gene 0.68 0.33 -0.32
18 AT4G38340 Plant regulator RWP-RK family protein 0.68 0.31 -0.31
19 AT2G15270 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1168 (InterPro:IPR009548); Has 1930
Blast hits to 1364 proteins in 219 species: Archae - 0;
Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96;
Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).		 -0.68 0.31 -0.31
20 AT3G59100 glucan synthase-like 11 glucan synthase-like 11, gsl11,
glucan synthase-like 11		 0.68 0.31 -0.3
21 AT3G01880 Plant protein of unknown function (DUF946) 0.67 0.3 -0.33
22 AT1G28680 HXXXD-type acyl-transferase family protein -0.67 0.33 -0.32
23 AT1G53090 SPA1-related 4 SPA1-related 4 0.67 0.32 -0.32
24 AT1G69570 Dof-type zinc finger DNA-binding family protein -0.67 0.32 -0.3
25 AT1G20575 Nucleotide-diphospho-sugar transferases superfamily protein dolichol phosphate mannose
synthase 1		 -0.67 0.3 -0.32
26 AT1G55350 calpain-type cysteine protease family ATDEK1, DEFECTIVE KERNEL 1, embryo
defective 1275, EMBRYO DEFECTIVE
80		 0.67 0.33 -0.29
27 AT2G46060 transmembrane protein-related 0.67 0.3 -0.32
28 AT5G51510 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1352 (InterPro:IPR009787); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.31 -0.33
29 AT2G45400 NAD(P)-binding Rossmann-fold superfamily protein BEN1 -0.66 0.33 -0.33
30 AT2G34020 Calcium-binding EF-hand family protein -0.66 0.33 -0.3
31 AT1G71697 choline kinase 1 choline kinase 1, CHOLINE KINASE,
choline kinase 1		 -0.66 0.32 -0.29
32 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.65 0.32 -0.31
33 AT2G17380 associated protein 19 associated protein 19 -0.65 0.31 -0.32
34 AT2G47550 Plant invertase/pectin methylesterase inhibitor superfamily -0.65 0.33 -0.32
35 AT4G14110 COP9 signalosome, subunit CSN8 CONSTITUTIVE PHOTOMORPHOGENIC 9,
COP9 SIGNALOSOME SUBUNIT 8, EMBRYO
DEFECTIVE 143, FUSCA 7		 -0.65 0.31 -0.32
36 AT4G02730 Transducin/WD40 repeat-like superfamily protein AtWDR5b, human WDR5 (WD40 repeat)
homolog b		 -0.65 0.28 -0.32
37 AT5G20090 Uncharacterised protein family (UPF0041) -0.65 0.31 -0.32
38 AT1G47260 gamma carbonic anhydrase 2 APFI, gamma carbonic anhydrase 2 -0.64 0.33 -0.33
39 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.35 -0.32
40 AT5G27940 WPP domain protein 3 WPP domain protein 3 0.64 0.31 -0.28
41 AT1G22200 Endoplasmic reticulum vesicle transporter protein -0.64 0.32 -0.32
42 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.64 0.31 -0.33
43 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 -0.64 0.33 -0.32
44 AT1G22060 LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: FBD, F-box and Leucine Rich
Repeat domains containing protein (TAIR:AT1G22000.1); Has
84739 Blast hits to 38714 proteins in 2257 species: Archae
- 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706;
Plants - 4675; Viruses - 308; Other Eukaryotes - 18553
(source: NCBI BLink).		 0.64 0.33 -0.31
45 AT2G24840 AGAMOUS-like 61 AGAMOUS-like 61, DIANA -0.64 0.32 -0.3
46 AT2G45450 protein binding LITTLE ZIPPER 1 0.64 0.28 -0.31
47 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 0.64 0.34 -0.31
48 AT3G22845 emp24/gp25L/p24 family/GOLD family protein -0.64 0.32 -0.33
49 AT5G39660 cycling DOF factor 2 cycling DOF factor 2 -0.63 0.33 -0.3
50 AT5G46300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.33 -0.32
51 AT2G23940 Protein of unknown function (DUF788) -0.63 0.31 -0.33
52 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 0.63 0.31 -0.32
53 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.63 0.3 -0.31
54 AT5G39340 histidine-containing phosphotransmitter 3 histidine-containing
phosphotransmitter 3, ARABIDOPSIS
THALIANA HISTIDINE-CONTAINING
PHOSPHOTRANSMITTER 2		 -0.63 0.31 -0.31
55 AT4G13130 Cysteine/Histidine-rich C1 domain family protein -0.63 0.3 -0.33
56 AT2G21120 Protein of unknown function (DUF803) -0.63 0.31 -0.33
57 AT1G35330 RING/U-box superfamily protein -0.63 0.29 -0.33
58 AT4G30320 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.63 0.3 -0.32
59 AT5G45570 Ulp1 protease family protein 0.63 0.32 -0.31
60 AT5G54490 pinoid-binding protein 1 pinoid-binding protein 1 -0.63 0.33 -0.31
61 AT1G09920 TRAF-type zinc finger-related -0.63 0.31 -0.33
62 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.63 0.33 -0.3
63 AT1G18970 germin-like protein 4 germin-like protein 4 -0.63 0.31 -0.34
64 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE 0.63 0.32 -0.31
65 AT5G02480 HSP20-like chaperones superfamily protein 0.62 0.3 -0.32
66 AT3G33530 Transducin family protein / WD-40 repeat family protein 0.62 0.34 -0.34
67 AT1G12260 NAC 007 NAC 007, EMBRYO DEFECTIVE 2749,
NAC 007, VASCULAR RELATED
NAC-DOMAIN PROTEIN 4		 0.62 0.32 -0.32
68 AT5G50930 Histone superfamily protein -0.62 0.3 -0.31
69 AT2G03730 ACT domain repeat 5 ACT domain repeat 5 -0.62 0.29 -0.34
70 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein 0.62 0.34 -0.32
71 AT5G62520 similar to RCD one 5 similar to RCD one 5 -0.62 0.28 -0.33
72 AT4G21450 PapD-like superfamily protein -0.62 0.32 -0.29
73 AT3G03410 EF hand calcium-binding protein family -0.62 0.31 -0.33
74 AT1G23610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.62 0.32 -0.31
75 AT2G40070 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.62 0.32 -0.33
76 AT5G58910 laccase 16 laccase 16 -0.62 0.31 -0.32
77 AT1G78895 Reticulon family protein -0.62 0.31 -0.34
78 AT5G45010 DSS1 homolog on chromosome V DSS1 homolog on chromosome V, DSS1
homolog on chromosome V		 -0.62 0.31 -0.32
79 AT1G07990 SIT4 phosphatase-associated family protein 0.61 0.3 -0.32
80 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 -0.61 0.33 -0.31
81 AT3G57570 ARM repeat superfamily protein 0.61 0.33 -0.32
82 AT5G53310 myosin heavy chain-related -0.61 0.31 -0.3
83 AT5G52020 Integrase-type DNA-binding superfamily protein -0.61 0.32 -0.31
84 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.61 0.31 -0.32
85 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.32 -0.31
86 AT4G36790 Major facilitator superfamily protein -0.61 0.33 -0.35
87 AT3G43530 transposable element gene -0.61 0.33 -0.32
88 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.61 0.33 -0.3
89 AT2G45620 Nucleotidyltransferase family protein 0.61 0.34 -0.31
90 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.31 -0.31
91 AT1G72360 Integrase-type DNA-binding superfamily protein AtERF73, ethylene response factor
73, HYPOXIA RESPONSIVE ERF
(ETHYLENE RESPONSE FACTOR) 1		 -0.6 0.29 -0.29
92 AT3G56600 Protein kinase superfamily protein -0.6 0.32 -0.32
93 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.3 -0.3
94 AT3G51160 NAD(P)-binding Rossmann-fold superfamily protein GDP-D-MANNOSE-4,6-DEHYDRATASE 2,
MURUS 1, MURUS 1		 -0.6 0.31 -0.32
95 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.6 0.32 -0.3
96 AT3G62720 xylosyltransferase 1 ATXT1, xylosyltransferase 1, XYG
XYLOSYLTRANSFERASE 1		 -0.6 0.32 -0.31
97 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.6 0.31 -0.32
98 AT3G49950 GRAS family transcription factor 0.6 0.28 -0.3
99 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.31
100 AT3G19390 Granulin repeat cysteine protease family protein -0.6 0.33 -0.32
101 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 -0.6 0.34 -0.3
102 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 -0.6 0.34 -0.33
103 AT4G23493 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.32 -0.3
104 AT5G19840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.33 -0.32
105 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.31 -0.34
106 AT5G51400 PLAC8 family protein -0.59 0.3 -0.28
107 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 -0.59 0.33 -0.31
108 AT1G22050 membrane-anchored ubiquitin-fold protein 6 precursor membrane-anchored ubiquitin-fold
protein 6 precursor		 -0.59 0.31 -0.33
109 AT5G61220 LYR family of Fe/S cluster biogenesis protein -0.59 0.32 -0.32
110 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.59 0.3 -0.31
111 AT4G38530 phospholipase C1 phospholipase C1, phospholipase C1 0.59 0.33 -0.31
112 AT2G41100 Calcium-binding EF hand family protein ARABIDOPSIS THALIANA CALMODULIN
LIKE 4, TOUCH 3		 -0.59 0.32 -0.32
113 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 -0.59 0.27 -0.33
114 AT1G63350 Disease resistance protein (CC-NBS-LRR class) family -0.59 0.31 -0.3
115 AT4G13450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.58 0.33 -0.32
116 AT2G27220 BEL1-like homeodomain 5 BEL1-like homeodomain 5 0.58 0.34 -0.3
117 AT1G31030 transposable element gene 0.58 0.33 -0.32
118 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.58 0.33 -0.31
119 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 0.58 0.3 -0.32
120 AT1G63430 Leucine-rich repeat protein kinase family protein 0.58 0.32 -0.31
121 AT1G21700 SWITCH/sucrose nonfermenting 3C SWITCH/sucrose nonfermenting 3C,
CHB4, SWITCH/sucrose nonfermenting
3C		 0.58 0.31 -0.33
122 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 0.58 0.32 -0.33
123 AT5G32460 Transcriptional factor B3 family protein 0.58 0.31 -0.34
124 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 0.58 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0124 Isonicotinic acid - - - 0.63 0.42 -0.48