AT3G63180 : TICKLE
Query Information
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AGICode AT3G63180
Description TIC-like
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G63180 TIC-like TICKLE, TIC-like 1 0.32 -0.32
2 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.84 0.31 -0.32
3 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.79 0.31 -0.31
4 AT5G15240 Transmembrane amino acid transporter family protein 0.75 0.31 -0.32
5 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 0.75 0.32 -0.32
6 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.74 0.3 -0.33
7 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.74 0.33 -0.34
8 AT4G34040 RING/U-box superfamily protein 0.74 0.33 -0.3
9 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.73 0.32 -0.35
10 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.73 0.31 -0.3
11 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 0.73 0.31 -0.33
12 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.73 0.34 -0.33
13 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.72 0.36 -0.29
14 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 0.72 0.29 -0.3
15 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 0.7 0.31 -0.3
16 AT2G25660 embryo defective 2410 embryo defective 2410 0.7 0.31 -0.29
17 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.7 0.3 -0.32
18 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 0.7 0.32 -0.33
19 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.32 -0.31
20 AT5G03970 F-box associated ubiquitination effector family protein -0.69 0.3 -0.3
21 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.69 0.31 -0.32
22 AT4G34500 Protein kinase superfamily protein -0.69 0.32 -0.32
23 AT2G07360 SH3 domain-containing protein 0.69 0.31 -0.31
24 AT3G19930 sugar transporter 4 SUGAR TRANSPORTER 4, sugar
transporter 4		 -0.69 0.3 -0.32
25 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.69 0.33 -0.31
26 AT1G11260 sugar transporter 1 SUGAR TRANSPORTER 1, sugar
transporter 1		 -0.69 0.3 -0.34
27 AT1G72060 serine-type endopeptidase inhibitors -0.68 0.33 -0.29
28 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 -0.68 0.3 -0.32
29 AT2G14570 transposable element gene 0.68 0.31 -0.31
30 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 0.68 0.32 -0.3
31 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.67 0.34 -0.32
32 AT1G02020 nitroreductase family protein 0.67 0.32 -0.32
33 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 0.67 0.34 -0.33
34 AT2G43620 Chitinase family protein -0.67 0.31 -0.31
35 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 0.67 0.33 -0.34
36 AT1G45160 Protein kinase superfamily protein 0.67 0.31 -0.33
37 AT5G65620 Zincin-like metalloproteases family protein 0.67 0.34 -0.32
38 AT2G45540 WD-40 repeat family protein / beige-related 0.66 0.31 -0.32
39 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.66 0.34 -0.32
40 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.66 0.31 -0.34
41 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.66 0.32 -0.3
42 AT3G47380 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.66 0.32 -0.33
43 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 0.66 0.31 -0.31
44 AT5G56290 peroxin 5 ARABIDOPSIS PEROXIN 5, EMBRYO
DEFECTIVE 2790, peroxin 5		 0.66 0.31 -0.32
45 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 -0.66 0.31 -0.31
46 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.66 0.35 -0.33
47 AT1G13470 Protein of unknown function (DUF1262) -0.65 0.31 -0.32
48 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.65 0.32 -0.31
49 AT3G15980 Coatomer, beta' subunit 0.65 0.3 -0.28
50 AT4G16280 RNA binding;abscisic acid binding FCA 0.65 0.3 -0.31
51 AT1G03280 Transcription factor TFIIE, alpha subunit 0.65 0.32 -0.31
52 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein 0.65 0.31 -0.28
53 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.65 0.32 -0.32
54 AT1G13540 Protein of unknown function (DUF1262) -0.65 0.32 -0.31
55 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.3 -0.31
56 AT1G02360 Chitinase family protein -0.65 0.32 -0.32
57 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 -0.65 0.31 -0.31
58 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 0.65 0.33 -0.28
59 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.65 0.31 -0.33
60 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.65 0.32 -0.3
61 AT5G20840 Phosphoinositide phosphatase family protein 0.64 0.29 -0.3
62 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.64 0.33 -0.33
63 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.64 0.3 -0.31
64 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.33
65 AT3G56890 F-box associated ubiquitination effector family protein 0.64 0.33 -0.3
66 AT5G27970 ARM repeat superfamily protein 0.64 0.31 -0.33
67 AT1G64170 cation/H+ exchanger 16 cation/H+ exchanger 16, cation/H+
exchanger 16		 -0.64 0.3 -0.31
68 AT1G71820 SEC6 SEC6 0.64 0.31 -0.33
69 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 -0.64 0.32 -0.33
70 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.63 0.32 -0.3
71 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.63 0.33 -0.29
72 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor -0.63 0.32 -0.31
73 AT4G12500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.3 -0.32
74 AT4G28370 RING/U-box superfamily protein 0.63 0.33 -0.28
75 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.63 0.31 -0.31
76 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.63 0.31 -0.29
77 AT4G23610 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.63 0.31 -0.32
78 AT3G02850 STELAR K+ outward rectifier STELAR K+ outward rectifier -0.62 0.32 -0.31
79 AT5G33200 transposable element gene -0.62 0.31 -0.32
80 AT1G09290 unknown protein; Has 73 Blast hits to 71 proteins in 26
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11;
Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.62 0.31 -0.33
81 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.62 0.32 -0.31
82 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.62 0.31 -0.32
83 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.62 0.33 -0.3
84 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.3 -0.31
85 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.61 0.35 -0.31
86 AT1G12470 zinc ion binding 0.61 0.33 -0.32
87 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein 0.61 0.31 -0.33
88 AT5G61910 DCD (Development and Cell Death) domain protein 0.61 0.3 -0.31
89 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.61 0.32 -0.31
90 AT4G33210 F-box family protein SLOW MOTION 0.61 0.32 -0.3
91 AT4G38640 Plasma-membrane choline transporter family protein 0.61 0.31 -0.32
92 AT5G27630 acyl-CoA binding protein 5 acyl-CoA binding protein 5 0.61 0.3 -0.31
93 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.61 0.32 -0.33
94 AT4G01740 Cysteine/Histidine-rich C1 domain family protein -0.61 0.32 -0.31
95 AT3G61600 POZ/BTB containin G-protein 1 POZ/BTB containin G-protein 1,
POZ/BTB containin G-protein 1		 0.61 0.31 -0.33
96 AT4G38120 ARM repeat superfamily protein 0.61 0.32 -0.3
97 AT1G17980 poly(A) polymerase 1 poly(A) polymerase 1 0.61 0.34 -0.31
98 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.61 0.3 -0.33
99 AT4G13020 Protein kinase superfamily protein MHK 0.61 0.33 -0.29
100 AT5G19310 Homeotic gene regulator 0.61 0.33 -0.33
101 AT1G11790 arogenate dehydratase 1 arogenate dehydratase 1,
Arabidopsis thaliana arogenate
dehydratase 1		 0.6 0.31 -0.31
102 AT2G04830 Protein of unknown function (DUF295) 0.6 0.3 -0.32
103 AT3G13220 ABC-2 type transporter family protein ATP-binding cassette G26,
AtABCG26, MSR02, WBC27		 0.6 0.32 -0.32
104 AT2G39520 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.3
105 AT2G36810 ARM repeat superfamily protein 0.6 0.33 -0.3
106 AT3G24800 proteolysis 1 proteolysis 1 0.6 0.31 -0.33
107 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.6 0.33 -0.32
108 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 0.6 0.31 -0.32
109 AT3G04020 unknown protein; Has 26 Blast hits to 25 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.6 0.33 -0.32
110 AT1G58230 binding 0.6 0.31 -0.31
111 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family -0.59 0.32 -0.3
112 AT5G08565 Transcription initiation Spt4-like protein -0.59 0.32 -0.29
113 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.3 -0.3
114 AT5G64120 Peroxidase superfamily protein -0.58 0.33 -0.3
115 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.32 -0.3
116 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.32 -0.32
117 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.34 -0.29
118 AT3G22060 Receptor-like protein kinase-related family protein -0.58 0.33 -0.32
119 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.58 0.32 -0.32
120 AT4G26620 Sucrase/ferredoxin-like family protein -0.57 0.32 -0.33
121 AT4G14365 XB3 ortholog 4 in Arabidopsis thaliana XB3 ortholog 4 in Arabidopsis
thaliana		 -0.57 0.33 -0.3
122 AT4G22250 RING/U-box superfamily protein -0.57 0.32 -0.33
123 AT3G29010 Biotin/lipoate A/B protein ligase family -0.57 0.32 -0.32
124 AT5G48550 F-box associated ubiquitination effector family protein -0.57 0.32 -0.29
125 AT5G66640 DA1-related protein 3 DA1-related protein 3 -0.57 0.32 -0.3
126 AT2G26440 Plant invertase/pectin methylesterase inhibitor superfamily -0.56 0.3 -0.3
127 AT1G09930 oligopeptide transporter 2 oligopeptide transporter 2,
oligopeptide transporter 2		 -0.56 0.3 -0.3
128 AT1G19610 Arabidopsis defensin-like protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
78, PDF1.4		 -0.56 0.31 -0.31
129 AT2G17740 Cysteine/Histidine-rich C1 domain family protein -0.55 0.3 -0.35
130 AT2G41810 Protein of unknown function, DUF642 -0.55 0.32 -0.33
131 AT5G52830 WRKY DNA-binding protein 27 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 27, WRKY
DNA-binding protein 27		 -0.55 0.32 -0.29
132 AT5G52140 RING/U-box superfamily protein -0.55 0.31 -0.32
133 AT2G24950 Protein of Unknown Function (DUF239) -0.55 0.34 -0.32
134 AT2G16600 rotamase CYP 3 rotamase CYP 3 -0.55 0.3 -0.31
135 AT5G52760 Copper transport protein family -0.55 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
136 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.73 0.44 -0.44 C0233
137 C0089 Fortunellin - - - 0.73 0.45 -0.48
138 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - 0.69 0.44 -0.46
139 C0002 α-Lipoic acid (+/-)-α-Lipoic acid Lipoate cofactor of fatty acid biosynthesis 0.65 0.44 -0.4 C0002
140 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		0.62 0.45 -0.41