AT3G63300 : FORKED 1
Query Information
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AGICode AT3G63300
Description FORKED 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G63300 FORKED 1 FORKED 1 1 0.31 -0.3
2 ATCG00810 ribosomal protein L22 ribosomal protein L22 0.83 0.33 -0.32
3 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.31 -0.32
4 AT3G05470 Actin-binding FH2 (formin homology 2) family protein 0.77 0.31 -0.32
5 AT4G33470 histone deacetylase 14 ATHDA14, histone deacetylase 14 0.76 0.3 -0.32
6 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 0.76 0.3 -0.31
7 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like -0.75 0.31 -0.29
8 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 0.75 0.31 -0.31
9 AT1G01790 K+ efflux antiporter 1 K+ EFFLUX ANTIPORTER 1, K+ efflux
antiporter 1		 0.74 0.32 -0.28
10 AT4G25900 Galactose mutarotase-like superfamily protein -0.73 0.29 -0.32
11 AT3G17840 receptor-like kinase 902 receptor-like kinase 902 0.73 0.31 -0.33
12 AT3G26590 MATE efflux family protein -0.73 0.32 -0.33
13 AT3G19515 CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5
(InterPro:IPR008383); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast
hits to 394 proteins in 84 species: Archae - 0; Bacteria -
3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0;
Other Eukaryotes - 175 (source: NCBI BLink).		 0.73 0.34 -0.32
14 AT1G54350 ABC transporter family protein ATP-binding cassette D2 0.73 0.3 -0.31
15 AT4G23100 glutamate-cysteine ligase ATECS1, CADMIUM SENSITIVE 2,
glutamate-cysteine ligase, GSHA,
PHYTOALEXIN DEFICIENT 2, ROOT
MERISTEMLESS 1		 -0.73 0.33 -0.32
16 AT1G49890 Family of unknown function (DUF566) QWRF domain containing 2 0.73 0.31 -0.3
17 AT2G42840 protodermal factor 1 protodermal factor 1 0.72 0.33 -0.3
18 ATCG00800 structural constituent of ribosome 0.72 0.29 -0.35
19 AT1G68400 leucine-rich repeat transmembrane protein kinase family
protein		 0.72 0.31 -0.3
20 AT3G24560 Adenine nucleotide alpha hydrolases-like superfamily
protein		 RASPBERRY 3 0.71 0.31 -0.3
21 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 0.71 0.3 -0.32
22 AT2G28870 unknown protein; Has 34 Blast hits to 34 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.33 -0.3
23 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 -0.71 0.31 -0.31
24 AT1G03055 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits
to 143 proteins in 26 species: Archae - 0; Bacteria - 6;
Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.7 0.32 -0.3
25 AT1G04620 coenzyme F420 hydrogenase family / dehydrogenase, beta
subunit family		 7-hydroxymethyl chlorophyll a
(HMChl) reductase		 0.7 0.31 -0.3
26 AT1G70140 formin 8 formin 8, formin 8 -0.7 0.32 -0.34
27 AT4G25030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G45410.3); Has 125 Blast hits
to 125 proteins in 36 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 4; Plants - 88; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.3 -0.32
28 AT1G30360 Early-responsive to dehydration stress protein (ERD4) early-responsive to dehydration 4 0.7 0.31 -0.3
29 AT3G61670 Protein of unknown function (DUF3133) 0.7 0.31 -0.31
30 AT5G36880 acetyl-CoA synthetase acetyl-CoA synthetase -0.7 0.31 -0.32
31 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 -0.69 0.32 -0.32
32 AT2G24230 Leucine-rich repeat protein kinase family protein 0.69 0.33 -0.31
33 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.32 -0.3
34 AT3G20510 Transmembrane proteins 14C -0.69 0.32 -0.29
35 AT5G07360 Amidase family protein -0.69 0.32 -0.29
36 AT3G62810 complex 1 family protein / LVR family protein -0.69 0.33 -0.3
37 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 0.69 0.32 -0.33
38 AT3G19660 unknown protein; Has 16 Blast hits to 16 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.29 -0.34
39 AT5G42890 sterol carrier protein 2 STEROL CARRIER PROTEIN 2, sterol
carrier protein 2		 -0.68 0.33 -0.3
40 AT5G36220 cytochrome p450 81d1 cytochrome P450, family 81,
subfamily D, polypeptide 1,
CYTOCHROME P450 91A1		 -0.68 0.31 -0.3
41 AT5G59330 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.68 0.3 -0.32
42 AT1G66200 glutamine synthase clone F11 glutamine synthase clone F11,
glutamine synthetase 1;2,
glutamine synthase clone F11		 -0.68 0.3 -0.33
43 AT3G60390 homeobox-leucine zipper protein 3 homeobox-leucine zipper protein 3 0.68 0.3 -0.34
44 AT5G12850 CCCH-type zinc finger protein with ARM repeat domain 0.68 0.32 -0.3
45 AT2G24200 Cytosol aminopeptidase family protein -0.68 0.31 -0.32
46 AT1G67510 Leucine-rich repeat protein kinase family protein 0.68 0.34 -0.32
47 AT1G27980 dihydrosphingosine phosphate lyase ATDPL1, dihydrosphingosine
phosphate lyase		 -0.67 0.3 -0.3
48 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.33 -0.31
49 AT4G09640 Protein of unknown function (DUF803) 0.67 0.3 -0.31
50 ATCG00790 ribosomal protein L16 ribosomal protein L16 0.67 0.32 -0.32
51 AT3G15095 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 9762 Blast hits to 6439
proteins in 764 species: Archae - 77; Bacteria - 1339;
Metazoa - 3211; Fungi - 718; Plants - 437; Viruses - 131;
Other Eukaryotes - 3849 (source: NCBI BLink).		 high chlorophyll fluorescence 243 0.67 0.32 -0.32
52 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 0.67 0.32 -0.31
53 AT3G62550 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.67 0.32 -0.31
54 AT5G04590 sulfite reductase sulfite reductase -0.67 0.33 -0.32
55 AT1G70370 polygalacturonase 2 polygalacturonase 2 0.67 0.31 -0.31
56 ATCG01110 NAD(P)H dehydrogenase subunit H NAD(P)H dehydrogenase subunit H 0.67 0.33 -0.32
57 AT1G65520 delta(3), delta(2)-enoyl CoA isomerase 1 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 1,
ENOYL-COA HYDRATASE/ISOMERASE C,
delta(3), delta(2)-enoyl CoA
isomerase 1, PEC11		 -0.66 0.31 -0.34
58 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 -0.66 0.32 -0.31
59 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.66 0.32 -0.34
60 ATCG01090 NADPH dehydrogenases NDHI 0.66 0.3 -0.31
61 AT3G54640 tryptophan synthase alpha chain TRYPTOPHAN-REQUIRING 3, tryptophan
synthase alpha chain		 -0.66 0.32 -0.3
62 AT2G27110 FAR1-related sequence 3 FAR1-related sequence 3 0.66 0.3 -0.31
63 ATCG00780 ribosomal protein L14 ribosomal protein L14 0.66 0.31 -0.3
64 AT4G21820 binding;calmodulin binding 0.66 0.32 -0.32
65 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.33 -0.31
66 AT1G12990 beta-1,4-N-acetylglucosaminyltransferase family protein 0.65 0.33 -0.32
67 AT2G18890 Protein kinase superfamily protein 0.65 0.3 -0.3
68 AT1G11020 RING/FYVE/PHD zinc finger superfamily protein -0.65 0.33 -0.31
69 AT1G17860 Kunitz family trypsin and protease inhibitor protein -0.65 0.29 -0.31
70 AT3G03680 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.65 0.31 -0.32
71 ATCG00820 ribosomal protein S19 ribosomal protein S19 0.65 0.32 -0.31
72 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.65 0.3 -0.32
73 AT1G16330 cyclin b3;1 cyclin b3;1 0.65 0.28 -0.32
74 AT1G19130 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold
(InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins
in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19;
Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink).		 -0.65 0.29 -0.3
75 AT1G21370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF218 (InterPro:IPR003848); Has 160 Blast
hits to 160 proteins in 86 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 102; Plants - 44; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink).		 -0.64 0.3 -0.33
76 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 0.64 0.3 -0.32
77 AT3G29810 COBRA-like protein 2 precursor COBRA-like protein 2 precursor -0.64 0.31 -0.32
78 AT2G22490 Cyclin D2;1 ATCYCD2;1, Cyclin D2;1 -0.64 0.32 -0.3
79 AT1G27850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G40070.1); Has 9215
Blast hits to 5316 proteins in 473 species: Archae - 6;
Bacteria - 773; Metazoa - 3392; Fungi - 1710; Plants - 539;
Viruses - 143; Other Eukaryotes - 2652 (source: NCBI
BLink).		 0.64 0.31 -0.31
80 AT3G54110 plant uncoupling mitochondrial protein 1 ARABIDOPSIS THALIANA PLANT
UNCOUPLING MITOCHONDRIAL PROTEIN
1, ARABIDOPSIS THALIANA UNCOUPLING
PROTEIN 1, plant uncoupling
mitochondrial protein 1, UCP,
UNCOUPLING PROTEIN 1		 -0.63 0.31 -0.32
81 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 -0.62 0.31 -0.33
82 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.31 -0.31
83 AT5G37510 NADH-ubiquinone dehydrogenase, mitochondrial, putative CI76, embryo defective 1467 -0.62 0.34 -0.33
84 AT3G09490 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.31 -0.34
85 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 -0.62 0.33 -0.33
86 AT5G12170 CRT (chloroquine-resistance transporter)-like transporter 3 CRT (chloroquine-resistance
transporter)-like transporter 3		 -0.62 0.29 -0.32
87 AT4G16260 Glycosyl hydrolase superfamily protein -0.62 0.33 -0.31
88 AT4G35980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.33 -0.31
89 AT5G43780 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS4 -0.61 0.34 -0.35
90 AT1G79390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.31 -0.32
91 AT2G16660 Major facilitator superfamily protein -0.61 0.33 -0.32
92 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25		 -0.61 0.31 -0.3
93 AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 -0.61 0.32 -0.34
94 AT1G43910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.31 -0.32
95 AT1G49820 S-methyl-5-thioribose kinase S-methyl-5-thioribose kinase,
S-methyl-5-thioribose kinase,
5-methylthioribose kinase 1		 -0.61 0.29 -0.31
96 AT4G33360 NAD(P)-binding Rossmann-fold superfamily protein farnesol dehydrogenase -0.61 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis 0.82 0.47 -0.43 C0007
98 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		0.81 0.45 -0.44 C0063
99 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.78 0.44 -0.42
100 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis 0.76 0.51 -0.51 C0248
101 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		0.76 0.44 -0.43
102 C0153 Monogalactosyldiacylgycerol-34:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.73 0.47 -0.45 C0153
103 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		0.67 0.4 -0.44 C0093