AGICode | AT3G63340 |
Description | Protein phosphatase 2C family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G63340 | Protein phosphatase 2C family protein | 1 | 0.32 | -0.3 | |||
2 | AT5G43770 | proline-rich family protein | -0.65 | 0.33 | -0.32 | |||
3 | AT5G38750 | asparaginyl-tRNA synthetase family | -0.64 | 0.32 | -0.34 | |||
4 | AT3G58810 | metal tolerance protein A2 | ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, METAL TOLERANCE PROTEIN 3, metal tolerance protein A2 |
0.63 | 0.3 | -0.3 | ||
5 | AT4G16050 | Aminotransferase-like, plant mobile domain family protein | -0.63 | 0.31 | -0.32 | |||
6 | AT3G05250 | RING/U-box superfamily protein | 0.63 | 0.29 | -0.28 | |||
7 | AT1G64580 | Pentatricopeptide repeat (PPR) superfamily protein | -0.63 | 0.32 | -0.31 | |||
8 | AT3G53720 | cation/H+ exchanger 20 | cation/H+ exchanger 20, cation/H+ exchanger 20 |
0.62 | 0.3 | -0.31 | ||
9 | AT1G13600 | basic leucine-zipper 58 | basic leucine-zipper 58, basic leucine-zipper 58 |
-0.62 | 0.29 | -0.33 | ||
10 | AT3G20650 | mRNA capping enzyme family protein | 0.62 | 0.29 | -0.32 | |||
11 | AT5G55140 | ribosomal protein L30 family protein | -0.61 | 0.31 | -0.32 | |||
12 | AT4G11090 | TRICHOME BIREFRINGENCE-LIKE 23 | TRICHOME BIREFRINGENCE-LIKE 23 | -0.6 | 0.31 | -0.32 | ||
13 | AT4G35880 | Eukaryotic aspartyl protease family protein | -0.6 | 0.32 | -0.3 | |||
14 | AT4G10120 | Sucrose-phosphate synthase family protein | ATSPS4F | 0.58 | 0.29 | -0.31 | ||
15 | AT2G43970 | RNA-binding protein | 0.58 | 0.32 | -0.33 | |||
16 | AT1G48660 | Auxin-responsive GH3 family protein | -0.58 | 0.3 | -0.32 | |||
17 | AT4G19010 | AMP-dependent synthetase and ligase family protein | 0.58 | 0.3 | -0.31 | |||
18 | AT3G44900 | cation/H+ exchanger 4 | cation/H+ exchanger 4, cation/H+ exchanger 4 |
0.58 | 0.3 | -0.32 | ||
19 | AT3G61570 | GRIP-related ARF-binding domain-containing protein 1 | GOLGIN CANDIDATE 3, GRIP-related ARF-binding domain-containing protein 1 |
0.58 | 0.31 | -0.32 | ||
20 | AT1G73710 | Pentatricopeptide repeat (PPR) superfamily protein | -0.58 | 0.32 | -0.3 | |||
21 | AT2G38300 | myb-like HTH transcriptional regulator family protein | 0.57 | 0.33 | -0.32 | |||
22 | AT3G18910 | EIN2 targeting protein2 | EIN2 targeting protein2 | -0.57 | 0.32 | -0.32 | ||
23 | AT3G10030 | aspartate/glutamate/uridylate kinase family protein | 0.56 | 0.33 | -0.31 | |||
24 | AT1G44990 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.56 | 0.31 | -0.32 | |||
25 | AT5G46000 | Mannose-binding lectin superfamily protein | 0.55 | 0.32 | -0.31 | |||
26 | AT5G04980 | DNAse I-like superfamily protein | 0.55 | 0.32 | -0.31 | |||
27 | AT2G42000 | Plant EC metallothionein-like protein, family 15 | Arabidopsis thaliana metallothionein 4a |
-0.55 | 0.32 | -0.31 | ||
28 | AT2G02310 | phloem protein 2-B6 | phloem protein 2-B6, phloem protein 2-B6 |
0.55 | 0.31 | -0.31 | ||
29 | AT5G23260 | K-box region and MADS-box transcription factor family protein |
ARABIDOPSIS BSISTER, AGAMOUS-like 32, TRANSPARENT TESTA16 |
-0.55 | 0.31 | -0.32 | ||
30 | AT5G41440 | RING/U-box superfamily protein | 0.55 | 0.32 | -0.31 | |||
31 | AT1G67860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67865.1); Has 13 Blast hits to 13 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.33 | -0.32 | |||
32 | AT4G32730 | Homeodomain-like protein | ATMYB3R-1, ARABIDOOSIS THALIANA MYB DOMAIN PROTEIN 3R1, MYB DOMAIN PROTEIN 3R1, C-MYB-LIKE TRANSCRIPTION FACTOR 3R-1, PC-MYB1 |
0.55 | 0.33 | -0.3 | ||
33 | AT4G19510 | Disease resistance protein (TIR-NBS-LRR class) | 0.54 | 0.31 | -0.3 | |||
34 | AT1G11220 | Protein of unknown function (DUF761) | -0.54 | 0.31 | -0.32 | |||
35 | AT3G46380 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.31 | -0.32 | |||
36 | AT3G31410 | transposable element gene | 0.54 | 0.31 | -0.31 | |||
37 | AT1G32980 | Subtilisin-like serine endopeptidase family protein | 0.54 | 0.31 | -0.32 | |||
38 | AT1G55760 | BTB/POZ domain-containing protein | -0.54 | 0.31 | -0.29 | |||
39 | AT3G28230 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Something about silencing protein 10 (Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp) family protein (TAIR:AT2G43650.1); Has 374 Blast hits to 360 proteins in 175 species: Archae - 0; Bacteria - 4; Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). |
-0.53 | 0.31 | -0.32 | |||
40 | AT3G01900 | cytochrome P450, family 94, subfamily B, polypeptide 2 | cytochrome P450, family 94, subfamily B, polypeptide 2 |
0.53 | 0.31 | -0.32 | ||
41 | AT3G48150 | anaphase-promoting complex subunit 8 | anaphase-promoting complex subunit 8, CDC23 |
-0.53 | 0.3 | -0.32 | ||
42 | AT2G24620 | S-locus glycoprotein family protein | -0.53 | 0.31 | -0.32 | |||
43 | AT1G65990 | type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein |
-0.52 | 0.3 | -0.32 | |||
44 | AT1G72660 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.52 | 0.31 | -0.33 | |||
45 | AT1G61420 | S-locus lectin protein kinase family protein | 0.52 | 0.3 | -0.31 | |||
46 | AT1G53010 | RING/U-box superfamily protein | -0.52 | 0.33 | -0.33 | |||
47 | AT1G52990 | thioredoxin family protein | -0.52 | 0.32 | -0.32 | |||
48 | AT5G18500 | Protein kinase superfamily protein | 0.52 | 0.35 | -0.33 | |||
49 | AT1G74870 | RING/U-box superfamily protein | -0.52 | 0.35 | -0.31 | |||
50 | AT5G05030 | Protein of Unknown Function (DUF239) | 0.52 | 0.33 | -0.32 | |||
51 | AT4G08670 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.52 | 0.33 | -0.34 | |||
52 | AT3G45950 | Pre-mRNA splicing Prp18-interacting factor | 0.51 | 0.33 | -0.32 | |||
53 | AT2G40530 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.34 | -0.33 | |||
54 | AT3G19310 | PLC-like phosphodiesterases superfamily protein | 0.51 | 0.32 | -0.32 | |||
55 | AT3G14225 | GDSL-motif lipase 4 | GDSL-motif lipase 4 | 0.51 | 0.31 | -0.31 | ||
56 | AT1G55570 | SKU5 similar 12 | SKU5 similar 12 | -0.5 | 0.31 | -0.31 | ||
57 | AT3G16960 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT3G16970.1); Has 22 Blast hits to 22 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.31 | -0.32 | |||
58 | AT4G36510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.5 | 0.3 | -0.34 | |||
59 | AT1G63870 | Disease resistance protein (TIR-NBS-LRR class) family | -0.5 | 0.3 | -0.31 | |||
60 | AT5G45420 | Duplicated homeodomain-like superfamily protein | membrane anchored MYB | -0.5 | 0.3 | -0.3 | ||
61 | AT5G05980 | DHFS-FPGS homolog B | DHFS-FPGS homolog B, DHFS-FPGS homolog B, folylpolyglutamate synthetase 1 |
0.5 | 0.3 | -0.34 | ||
62 | AT3G23350 | ENTH/VHS family protein | 0.49 | 0.32 | -0.35 | |||
63 | AT5G19270 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03566.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.49 | 0.33 | -0.3 | |||
64 | AT3G29140 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.31 | -0.33 | |||
65 | AT2G47780 | Rubber elongation factor protein (REF) | -0.49 | 0.29 | -0.31 | |||
66 | AT2G15800 | transposable element gene | -0.49 | 0.33 | -0.31 | |||
67 | AT1G80550 | Pentatricopeptide repeat (PPR) superfamily protein | -0.49 | 0.31 | -0.31 | |||
68 | AT2G04990 | transposable element gene | -0.49 | 0.32 | -0.3 | |||
69 | AT4G31030 | Putative membrane lipoprotein | -0.48 | 0.32 | -0.31 | |||
70 | AT3G28150 | TRICHOME BIREFRINGENCE-LIKE 22 | ALTERED XYLOGLUCAN 4-LIKE, TRICHOME BIREFRINGENCE-LIKE 22 |
-0.48 | 0.3 | -0.29 | ||
71 | AT5G52670 | Copper transport protein family | -0.48 | 0.33 | -0.3 | |||
72 | AT3G06870 | proline-rich family protein | -0.48 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
73 | C0207 | Phosphatidylglycerol-34:5 | - | - | - | 0.67 | 0.44 | -0.46 | ||
74 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
0.66 | 0.45 | -0.42 |