AT3G62870 : -
Query Information
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AGICode AT3G62870
Description Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G62870 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 1 0.3 -0.32
2 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 0.94 0.3 -0.32
3 AT1G26880 Ribosomal protein L34e superfamily protein 0.93 0.29 -0.32
4 AT3G23390 Zinc-binding ribosomal protein family protein 0.93 0.32 -0.32
5 AT2G34480 Ribosomal protein L18ae/LX family protein 0.93 0.31 -0.33
6 AT3G25520 ribosomal protein L5 ribosomal protein L5, OLIGOCELLULA
5, PIGGYBACK3, RIBOSOMAL PROTEIN
L5 A		 0.92 0.33 -0.33
7 AT2G01250 Ribosomal protein L30/L7 family protein 0.92 0.33 -0.34
8 AT4G29410 Ribosomal L28e protein family 0.92 0.33 -0.33
9 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.91 0.34 -0.32
10 AT3G47370 Ribosomal protein S10p/S20e family protein 0.91 0.32 -0.3
11 AT5G27770 Ribosomal L22e protein family 0.91 0.31 -0.28
12 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.91 0.35 -0.31
13 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.91 0.32 -0.31
14 AT4G16720 Ribosomal protein L23/L15e family protein 0.9 0.31 -0.31
15 AT5G09510 Ribosomal protein S19 family protein 0.9 0.32 -0.32
16 AT5G67510 Translation protein SH3-like family protein 0.9 0.31 -0.29
17 AT1G34030 Ribosomal protein S13/S18 family 0.9 0.31 -0.3
18 AT1G23290 Ribosomal protein L18e/L15 superfamily protein RIBOSOMAL PROTEIN L27A, RPL27AB 0.9 0.32 -0.35
19 AT5G10360 Ribosomal protein S6e embryo defective 3010, Ribosomal
protein small subunit 6b		 0.9 0.3 -0.3
20 AT2G19730 Ribosomal L28e protein family 0.9 0.32 -0.32
21 AT3G06680 Ribosomal L29e protein family 0.9 0.32 -0.32
22 AT3G04840 Ribosomal protein S3Ae 0.89 0.33 -0.32
23 AT2G33370 Ribosomal protein L14p/L23e family protein 0.89 0.31 -0.32
24 AT1G67430 Ribosomal protein L22p/L17e family protein 0.89 0.35 -0.31
25 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.89 0.32 -0.33
26 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.89 0.32 -0.33
27 AT3G56340 Ribosomal protein S26e family protein 0.89 0.32 -0.32
28 AT3G09500 Ribosomal L29 family protein 0.89 0.33 -0.32
29 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.89 0.3 -0.33
30 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.88 0.32 -0.3
31 AT3G11510 Ribosomal protein S11 family protein 0.88 0.32 -0.32
32 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.88 0.33 -0.3
33 AT1G29250 Alba DNA/RNA-binding protein 0.88 0.3 -0.31
34 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.88 0.29 -0.3
35 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.88 0.3 -0.3
36 AT3G58700 Ribosomal L5P family protein 0.88 0.33 -0.32
37 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.88 0.29 -0.33
38 AT3G60245 Zinc-binding ribosomal protein family protein 0.88 0.31 -0.33
39 AT3G60770 Ribosomal protein S13/S15 0.88 0.3 -0.31
40 AT3G09200 Ribosomal protein L10 family protein 0.88 0.32 -0.33
41 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.88 0.31 -0.32
42 AT3G02080 Ribosomal protein S19e family protein 0.88 0.31 -0.31
43 AT5G61170 Ribosomal protein S19e family protein 0.88 0.31 -0.31
44 AT5G56670 Ribosomal protein S30 family protein 0.88 0.31 -0.33
45 AT1G02780 Ribosomal protein L19e family protein embryo defective 2386 0.87 0.31 -0.33
46 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.87 0.33 -0.3
47 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.87 0.33 -0.31
48 AT1G04480 Ribosomal protein L14p/L23e family protein 0.87 0.31 -0.33
49 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.33 -0.3
50 AT5G47210 Hyaluronan / mRNA binding family 0.87 0.33 -0.32
51 AT1G18540 Ribosomal protein L6 family protein 0.87 0.32 -0.32
52 AT5G41520 RNA binding Plectin/S10 domain-containing protein 0.87 0.33 -0.34
53 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.87 0.31 -0.33
54 AT4G31985 Ribosomal protein L39 family protein 0.87 0.31 -0.33
55 AT1G31860 histidine biosynthesis bifunctional protein (HISIE) AT-IE, HISTIDINE BIOSYNTHESIS 2 0.87 0.31 -0.31
56 AT5G57290 60S acidic ribosomal protein family 0.87 0.32 -0.32
57 AT5G35530 Ribosomal protein S3 family protein 0.87 0.32 -0.31
58 AT2G39390 Ribosomal L29 family protein 0.87 0.31 -0.34
59 AT2G25210 Ribosomal protein L39 family protein 0.87 0.31 -0.31
60 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.87 0.33 -0.32
61 AT3G07110 Ribosomal protein L13 family protein 0.87 0.34 -0.29
62 AT1G74270 Ribosomal protein L35Ae family protein 0.87 0.32 -0.35
63 AT3G22230 Ribosomal L27e protein family 0.87 0.31 -0.33
64 AT2G21580 Ribosomal protein S25 family protein 0.87 0.32 -0.31
65 AT1G15250 Zinc-binding ribosomal protein family protein 0.86 0.32 -0.31
66 AT3G49010 breast basic conserved 1 breast basic conserved 1, breast
basic conserved 1, 40S RIBOSOMAL
PROTEIN		 0.86 0.31 -0.32
67 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.86 0.33 -0.32
68 AT4G15000 Ribosomal L27e protein family 0.86 0.32 -0.32
69 AT3G53740 Ribosomal protein L36e family protein 0.86 0.32 -0.3
70 AT3G53430 Ribosomal protein L11 family protein 0.86 0.29 -0.31
71 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.86 0.31 -0.33
72 AT1G17880 basic transcription factor 3 ATBTF3, basic transcription factor
3		 0.86 0.31 -0.3
73 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.86 0.31 -0.32
74 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.86 0.31 -0.32
75 AT3G13920 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation
factor 4A1, RH4, TIF4A1		 0.86 0.33 -0.33
76 AT4G33865 Ribosomal protein S14p/S29e family protein 0.86 0.33 -0.3
77 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 0.86 0.3 -0.29
78 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.3 -0.32
79 AT3G04920 Ribosomal protein S24e family protein 0.85 0.33 -0.3
80 AT2G44120 Ribosomal protein L30/L7 family protein 0.85 0.32 -0.31
81 AT1G27400 Ribosomal protein L22p/L17e family protein 0.85 0.33 -0.35
82 AT3G24830 Ribosomal protein L13 family protein 0.85 0.32 -0.3
83 AT1G18080 Transducin/WD40 repeat-like superfamily protein ATARCA, RACK1A, RECEPTOR FOR
ACTIVATED C KINASE 1 A		 0.85 0.29 -0.31
84 AT1G73230 Nascent polypeptide-associated complex NAC 0.85 0.29 -0.3
85 AT5G15200 Ribosomal protein S4 0.85 0.3 -0.32
86 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.85 0.33 -0.31
87 AT3G62120 Class II aaRS and biotin synthetases superfamily protein 0.85 0.3 -0.3
88 AT3G52580 Ribosomal protein S11 family protein 0.85 0.33 -0.35
89 AT4G13170 Ribosomal protein L13 family protein 0.85 0.3 -0.32
90 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.85 0.31 -0.29
91 AT2G20450 Ribosomal protein L14 0.85 0.32 -0.33
92 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.85 0.32 -0.33
93 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.85 0.31 -0.32
94 AT3G09630 Ribosomal protein L4/L1 family 0.85 0.35 -0.33
95 AT3G16780 Ribosomal protein L19e family protein 0.85 0.33 -0.32
96 AT3G13230 RNA-binding KH domain-containing protein 0.85 0.33 -0.31
97 AT2G19750 Ribosomal protein S30 family protein 0.84 0.34 -0.32
98 AT5G41970 Metal-dependent protein hydrolase 0.84 0.33 -0.31
99 AT5G47700 60S acidic ribosomal protein family 0.84 0.3 -0.32
100 AT2G45710 Zinc-binding ribosomal protein family protein 0.84 0.32 -0.31
101 AT3G05560 Ribosomal L22e protein family 0.84 0.32 -0.3
102 AT2G37600 Ribosomal protein L36e family protein 0.84 0.31 -0.32
103 AT4G14320 Zinc-binding ribosomal protein family protein 0.84 0.3 -0.31
104 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.84 0.29 -0.32
105 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.84 0.29 -0.31
106 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.84 0.33 -0.32
107 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.84 0.31 -0.31
108 AT1G07070 Ribosomal protein L35Ae family protein 0.84 0.32 -0.33
109 AT1G75560 zinc knuckle (CCHC-type) family protein 0.84 0.32 -0.32
110 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 0.84 0.3 -0.31
111 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 0.84 0.32 -0.32
112 AT4G26230 Ribosomal protein L31e family protein 0.84 0.32 -0.3
113 AT2G40290 Eukaryotic translation initiation factor 2 subunit 1 0.84 0.32 -0.34
114 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.84 0.32 -0.3
115 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.83 0.31 -0.33
116 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.83 0.31 -0.32
117 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.79 0.34 -0.32
118 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.78 0.32 -0.33
119 AT4G36210 Protein of unknown function (DUF726) -0.78 0.31 -0.31
120 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.77 0.33 -0.32
121 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.31 -0.31
122 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 -0.77 0.32 -0.32
123 AT5G02230 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.77 0.31 -0.31
124 AT2G18480 Major facilitator superfamily protein -0.77 0.31 -0.31
125 AT5G28520 Mannose-binding lectin superfamily protein -0.77 0.32 -0.32
126 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.77 0.32 -0.32
127 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.76 0.33 -0.31
128 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.76 0.3 -0.31
129 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.76 0.31 -0.32
130 AT3G16940 calmodulin binding;transcription regulators -0.75 0.33 -0.34
131 AT5G23580 calmodulin-like domain protein kinase 9 ARABIDOPSIS THALIANA
CALMODULIN-LIKE DOMAIN PROTEIN
KINASE 9, ATCPK12, calmodulin-like
domain protein kinase 9,
CALCIUM-DEPENDENT PROTEIN KINASE
12		 -0.75 0.3 -0.3
132 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.75 0.31 -0.33
133 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.74 0.33 -0.32
134 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.74 0.3 -0.31
135 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.74 0.31 -0.33
136 AT5G03490 UDP-Glycosyltransferase superfamily protein -0.74 0.3 -0.31
137 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.74 0.3 -0.31
138 AT1G05840 Eukaryotic aspartyl protease family protein -0.74 0.29 -0.31
139 AT5G01990 Auxin efflux carrier family protein -0.74 0.32 -0.28
140 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.74 0.3 -0.31
141 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.74 0.29 -0.32
142 AT2G40270 Protein kinase family protein -0.74 0.31 -0.3
143 AT1G74410 RING/U-box superfamily protein -0.72 0.28 -0.33
144 AT2G32800 protein kinase family protein AP4.3A -0.72 0.3 -0.32
145 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.72 0.33 -0.31
146 AT3G26460 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.72 0.32 -0.32
147 AT5G38895 RING/U-box superfamily protein -0.72 0.31 -0.32
148 AT1G31480 shoot gravitropism 2 (SGR2) SHOOT GRAVITROPISM 2 -0.71 0.3 -0.29
149 AT5G27280 Zim17-type zinc finger protein -0.71 0.33 -0.33
150 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.71 0.33 -0.3
151 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.69 0.31 -0.32
152 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.69 0.31 -0.33
153 AT5G05230 RING/U-box superfamily protein -0.69 0.29 -0.31
154 AT3G14067 Subtilase family protein -0.69 0.3 -0.31
155 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.69 0.31 -0.31
156 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.69 0.31 -0.31
157 AT4G32160 Phox (PX) domain-containing protein -0.69 0.31 -0.3
158 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.69 0.31 -0.33
159 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.68 0.32 -0.32
160 AT5G67210 Protein of unknown function (DUF579) IRX15-LIKE -0.68 0.31 -0.31
161 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.68 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
162 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.73 0.3 -0.31 C0260
163 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.72 0.32 -0.33 C0054
164 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.68 0.43 -0.43 C0107