AT3G62960 : -
Query Information
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AGICode AT3G62960
Description Thioredoxin superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G62960 Thioredoxin superfamily protein 1 0.3 -0.33
2 AT1G63220 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.77 0.31 -0.3
3 AT4G03200 catalytics -0.76 0.31 -0.32
4 AT1G28260 Telomerase activating protein Est1 -0.75 0.31 -0.31
5 AT3G06510 Glycosyl hydrolase superfamily protein SENSITIVE TO FREEZING 2, SENSITIVE
TO FREEZING 2		 -0.74 0.31 -0.33
6 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.74 0.31 -0.32
7 AT4G19390 Uncharacterised protein family (UPF0114) -0.73 0.31 -0.32
8 AT5G22290 NAC domain containing protein 89 NAC domain containing protein 89,
fructose-sensing quantitative
trait locus 6, NAC domain
containing protein 89		 -0.73 0.3 -0.34
9 AT2G14890 arabinogalactan protein 9 arabinogalactan protein 9 0.71 0.31 -0.33
10 AT1G52700 alpha/beta-Hydrolases superfamily protein -0.71 0.3 -0.31
11 AT5G14070 Thioredoxin superfamily protein ROXY2 0.71 0.3 -0.31
12 AT5G66590 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.71 0.31 -0.3
13 AT1G65310 xyloglucan endotransglucosylase/hydrolase 17 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 17,
xyloglucan
endotransglucosylase/hydrolase 17		 0.7 0.34 -0.32
14 AT2G13820 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP2, xylogen protein 2 0.7 0.29 -0.32
15 AT1G49860 glutathione S-transferase (class phi) 14 glutathione S-transferase (class
phi) 14, glutathione S-transferase
(class phi) 14		 0.7 0.32 -0.33
16 AT4G38370 Phosphoglycerate mutase family protein 0.69 0.32 -0.31
17 AT5G06930 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3369 Blast hits to 1526 proteins in
313 species: Archae - 2; Bacteria - 910; Metazoa - 754;
Fungi - 336; Plants - 137; Viruses - 11; Other Eukaryotes -
1219 (source: NCBI BLink).		 0.69 0.31 -0.31
18 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 0.69 0.31 -0.3
19 AT4G13710 Pectin lyase-like superfamily protein 0.69 0.31 -0.33
20 AT1G80280 alpha/beta-Hydrolases superfamily protein 0.69 0.29 -0.3
21 AT4G26490 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.69 0.32 -0.31
22 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.32 -0.32
23 AT2G43050 Plant invertase/pectin methylesterase inhibitor superfamily ATPMEPCRD 0.68 0.31 -0.33
24 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.68 0.32 -0.34
25 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.68 0.32 -0.3
26 AT5G45160 Root hair defective 3 GTP-binding protein (RHD3) -0.68 0.3 -0.32
27 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 -0.68 0.32 -0.3
28 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.32 -0.31
29 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 -0.67 0.3 -0.29
30 AT4G14750 IQ-domain 19 IQ-domain 19 0.67 0.34 -0.32
31 AT4G16160 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-2, ATOEP16-S -0.67 0.31 -0.32
32 AT3G08020 PHD finger family protein -0.67 0.3 -0.3
33 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 0.67 0.32 -0.31
34 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.66 0.33 -0.32
35 AT1G16030 heat shock protein 70B heat shock protein 70B -0.66 0.31 -0.34
36 AT2G16780 Transducin family protein / WD-40 repeat family protein MSI02, MULTICOPY SUPPRESSOR OF
IRA1 2, NFC02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 2		 0.66 0.3 -0.3
37 AT2G36640 embryonic cell protein 63 embryonic cell protein 63,
embryonic cell protein 63		 -0.66 0.31 -0.32
38 AT5G65990 Transmembrane amino acid transporter family protein -0.66 0.31 -0.32
39 AT5G35180 Protein of unknown function (DUF1336) -0.66 0.33 -0.29
40 AT4G12030 bile acid transporter 5 BILE ACID:SODIUM SYMPORTER FAMILY
PROTEIN 5, bile acid transporter 5		 0.66 0.31 -0.32
41 AT4G29820 homolog of CFIM-25 ARABIDOPSIS THALIANA HOMOLOG OF
CFIM-25, homolog of CFIM-25		 -0.65 0.33 -0.33
42 AT1G06830 Glutaredoxin family protein 0.65 0.34 -0.34
43 AT5G16550 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.31 -0.31
44 AT2G46470 inner membrane protein OXA1-like inner membrane protein OXA1-like 0.65 0.32 -0.28
45 AT1G62150 Mitochondrial transcription termination factor family
protein		 0.65 0.31 -0.33
46 AT1G48230 nodulin MtN21 /EamA-like transporter family protein 0.65 0.33 -0.32
47 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.64 0.31 -0.33
48 AT1G28140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2301, transmembrane
(InterPro:IPR019275); Has 140 Blast hits to 140 proteins in
72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink).		 -0.64 0.33 -0.32
49 AT5G26570 catalytics;carbohydrate kinases;phosphoglucan, water
dikinases		 ATGWD3, OK1, PHOSPHOGLUCAN WATER
DIKINASE		 -0.64 0.29 -0.36
50 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 -0.64 0.32 -0.31
51 AT4G26550 Got1/Sft2-like vescicle transport protein family 0.64 0.3 -0.31
52 AT1G11670 MATE efflux family protein 0.64 0.31 -0.32
53 AT5G15900 TRICHOME BIREFRINGENCE-LIKE 19 TRICHOME BIREFRINGENCE-LIKE 19 0.63 0.33 -0.31
54 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 -0.63 0.29 -0.31
55 AT3G03620 MATE efflux family protein -0.63 0.32 -0.36
56 AT2G14080 Disease resistance protein (TIR-NBS-LRR class) family -0.63 0.3 -0.3
57 AT5G42860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G45688.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.3 -0.31
58 AT4G28250 expansin B3 expansin B3, ATHEXP BETA 1.6,
expansin B3		 0.63 0.3 -0.32
59 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.3
60 AT2G25450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.63 0.33 -0.31
61 AT5G57360 Galactose oxidase/kelch repeat superfamily protein ADAGIO 1, FKF1-LIKE PROTEIN 2, LOV
KELCH PROTEIN 1, ZEITLUPE		 -0.63 0.31 -0.31
62 AT1G73620 Pathogenesis-related thaumatin superfamily protein 0.63 0.32 -0.31
63 AT2G35940 BEL1-like homeodomain 1 BEL1-like homeodomain 1, embryo
sac development arrest 29		 -0.62 0.29 -0.32
64 AT2G40170 Stress induced protein ARABIDOPSIS EARLY
METHIONINE-LABELLED 6, EARLY
METHIONINE-LABELLED 6, LATE
EMBRYOGENESIS ABUNDANT 6		 -0.62 0.29 -0.34
65 AT1G48320 Thioesterase superfamily protein -0.62 0.31 -0.32
66 AT3G47080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.32 -0.3
67 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 -0.62 0.32 -0.3
68 AT3G01520 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.62 0.31 -0.32
69 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.61 0.31 -0.31
70 AT4G25140 oleosin 1 OLEOSIN 1, oleosin 1 -0.61 0.3 -0.29
71 AT2G17730 NEP-interacting protein 2 NEP-interacting protein 2 -0.61 0.3 -0.32
72 AT2G33070 nitrile specifier protein 2 NITRILE-SPECIFIER PROTEIN 2,
nitrile specifier protein 2		 -0.6 0.32 -0.29
73 AT5G58380 SOS3-interacting protein 1 CBL-INTERACTING PROTEIN KINASE 10,
PKS2, SOS3-interacting protein 1,
SNF1-RELATED PROTEIN KINASE 3.8		 -0.6 0.34 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
74 C0175 MST_2379.9 - - - -0.69 0.44 -0.45
75 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.68 0.48 -0.46 C0016
76 C0161 MST_1566.3 - - - -0.68 0.45 -0.45
77 C0163 MST_1589.2 - - - -0.65 0.45 -0.44
78 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.65 0.34 -0.3 C0052
79 C0160 MST_1509.5 - - - -0.64 0.45 -0.46